Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->TOE2(3)               --------->ARR11(3)        --------->AHL20(2)                           --------->WOX13(1) ----->GT1     <---------ARR11(3)                --------->ANAC46 ---AGL15     --------->RVE1(1)          --------->AHL20(2) <---------AHL20(1)              --------- -->AGL15     --------->CCA1(1)          <---------AHL20(2) <---------ARR11(3)    <-----------GT1   taaaacagaataaaaaatatctattaaacttaaaattttggaaataaatacacatcaatctatatattccacttcaattctatttaacatgaaaccaaaa  806600                                                                                                <----                                                                                              <------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------HAHB4                                                                                            -------->HAHB4                                                                                           <---------ATHB51                                                        --------->AHL20(2)                 <---------ATHB12                                                        <---------AHL20(2)                 --------->ICU4                                                        --------->AHL20(1)                 <---------YAB1                                                        <---------AHL20(1)           ------>NtERF2                                                       --------->AHL20(2)           --------->DEAR3(1)                                                   >>>>>>>>>>GT-3b                  --------->RAP2.3(3)                                                ----------->GT1                   ------>NtERF2------                                            --------->YAB1                       --------->ANAC46                                           <---------YAB1         --------->YAB1 --------->ANAC58              ------>ZmHOX2a(2)          --------->YAB1<---------AHL20(2)        --------->ANAC58  <- >AtMYB61    <---------WOX13(1)     <-----------------AGL3  --------->YAB1 <---------GLK1(2)-------->ATHB1   ccccaaaaaaacttgatcgatatagattccacttcaaatctatttatgataagaaaaataaattagaatcaaaattagattctacgccccctaattatta  806700 -----AHL20(2)                                                                                    --- ---YAB1                                                                                          --- -AHL20(2)               <-----------GT1                                                          --- >YAB1              --------->AHL20(2)                                                            <-- -ICU4              <---------AHL20(2)         ------>ZmHOX2a(1)                                  --- >ATHB51   <---------TOE2(3)                  --------->TOE2(3)                      ---------->DOF2 --->AHL20(2)--------->YAB1                <-----------GT1                        --------->TOE2(3) --------ATHB12   <---------YAB1      <---------YAB1         <----------DOF2<-----------GT1   -------   aatcaatagaatcaaggattatttttttatcaagttgattactattttccttagtagacacctctttggaaaatgttcttacaacattaaagaatgaatc  806800                                                     --------->At5g28300                          <--    --------->YAB1                                  ----------->GT1                               ---    --------->AHL20(2)                           --------->MYB52(1)                      <---------ARR14(2) ------>ANAC58                                 ------>ZmHOX2a(2)                         --------->ARR14(2) -------->GT1                             <---------TOE2(3)                              <---------ARR11(3) ------>ANAC58  <----------ID1    <-------TEIL --------->MYB46(3)                        --------->ARR11(3) -------ANAC55(2)    <---------ARR11(3)  --------->YAB1      <---------ARR11(3)          <---------GLK1(2) ------>ANAC55(2)    --------->ARR11(3)<---------AHL20(2)    --------->ARR11(3)        ----------->ARR10 >TEIL      ---------->DOF2----------->HVH21-------->HAHB4  <---------GLK1(2)   ---------->DOF2   ---   aagtaataaaaaataaaagcgaagaactcgtgaccgttcatattaatgatccaacggttacaaaatctcatgacaaaatcactaaagcccagattttcat  806900                                               <------------------------ANAC81                    <<<<<<<<<<AtSR1           <---------AHL20(2)                    --------->LBD16          <---------AHL20(2)       <---------ANAC58 <---------ARR14(2)   --------->AHL20(2)       <---------ANAC58 --------->ARR14(2)   <---------AHL20(1)      --------->ATHB12<----------DOF2    --------->AHL20(2)             <---------HSFB2a(2)   <------------CBF<---------ANAC46      <---------AHL20(2)    *TSS <----------DOF2--------->DAG2 -------AHL20(2)   <---------ANAC58  <----------DOF2       <---------LBD16        ---------->DOF2 -------->TBP      <---------ANAC58---------->ID1  --------->AHL20(2)   --------->HSFB2a(2)      <--- ------>AHL20(2)  <---------LBD16 <-----------GT1  <---------AHL20(2)   --------->HSFC1(1)       <---   ataaatattgagtggcattttgcgcgttttctcatttttctttttaattttttttaatttttctgggtttctttctcgaatcgaaaaagggaagaacagc  807000                                                                                  <---------------AGL15                                                                                  ===================                                                                                 <---------ANAC46                          <----------DOF2                                        ----------------->AGL1                          ------>ZmHOX2a(1)                               ---------->DOF2              --------->YAB1          <---------ICU4                   >>>>>>>>>TBF1               --    <---------YAB1     <------ZmHOX2a(2)   --------->At4g35610     <---------At4g35610       --------   <---------AHL20(2) --------->ARR14(2)--------->At4g35610      --------->HSFB2a(2)        --------- <---------YAB1    <---------HSFB2a(2)--------->YAB1             <---------HSFB2a(2) ---------->DOF2 -------DOF2  <---------ICU4       --------->YAB1           <----------DOF2   ----------------------- ------DAG2  <---------ATHB12    <-----------GT1 --------->AHL20(2)--------->At4g35610     ----------   tttatttttattcgaatcattctcgatcctttttttttcatcatcagccaaaaaaattcagtctttttcagaagaagaaagttgcgaaaaagagaaagaa  807100                                        <---------GLK1(2)                                    <---------MYB59                                    --------->TOE1(3) ============================================================================================MADS_MADS -------->DOF2                    ------>MYB83                                           --------->ICU4 --->GT1                          -------->P                                        ----------->GT1 --------------->ANAC81           ------>MYB46(1)                            <---------------AGL15  < ->ANAC81                    <-----------GT1    <---------ATHB12             --------------->AGL15  < >DOF2  >>>>>>>>>MYB2 <---------YAB1--------->TOE2(3)                       <-----------------AGL2  <   ataaagagaaaaccaatttgaattatgtttatttccaacctaaattctcaatctttcttcccaaaactctaaaaattgtctatttttagtaaaaattcaa  807200                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                 --------->DAG2                                       --------->AHL20(2)                               ---------->DOF2                       <<<<<<<<<TBF1    <---------AHL20(2) ---------ANAC58  --------->ARR11(3)                     <---------MYB59             --------->AHL20(2) ---------ANAC58  <---------ARR11(3)                     ------>ZmHOX2a(2)       <---------ATHB12<--- ---------ANAC46 <---------RVE1(1)                <----------DOF2 <<<<<<<<<TBF1<-----------GT1  <----   ttccgtcttcaagttgcagagattttagtaagtgaaaggtgagtttcttcaacttttgatctaacttcttcttcttcatttcaaccatttattttctcag  807300          --------->AHL20(2)          <---------AHL20(2)     <-------TEIL ---->ZmHOX2a(2) ------>CCA1(2) ----ZmHOX2a(2) --------ARR10 ------AGP1 ----->AGP1 ----->ARR14(2)                                                                     <----------DOF2 ------ARR14(2)             --------->DEAR3(1)                                <------MYB46(1) ----->ARR11(3)       --------->YAB1                     <-------TEIL         <------MYB83          < ------ARR11(3)      <-------TEIL                 <----------DOF2           <--------P          ----- -----CCA1(2)  <-----------GT1 --------->LBD16 ------>ZmHOX2a(1)   <---------ARR11(3)          ------   atctaggtccattttattctcgattcatagccccccaaaaaaaaaactcctgctttgagttcattactaaatctccaagttggtctctttgttttcaaaa  807400                                             <---------------AGL15                                             --------------->AGL15                                            <-----------------AGL2                                            <-----------------AGL3                                            <-----------------AG                                            <-----------------AGL1                   --------->YAB1     ------->TEIL       <----------DOF2   <----------DOF2    ----------------->AGL3 ----------DOF2    <---------ICU4    <---------CCA1(2)        ------->TEIL ---->DAG2      --------->YAB1   <---------At5g28300 <------ZmHOX2a(1)                       <------- ---->DOF2     <---------YAB1   <-----------GT1    <---------TOE2(3)             <-----------GT1   agcttttagctttgattttgataatgacttttagttactgtatctatctaatttaggaaaaatgaatttggacaattttggagtaacaacattttgtgtt  807500  Previous    Next  AGI:  At5g03330.1    Description:  OTU-like cysteine protease family protein. similar to OTU-like cysteine protease family protein [Arabidopsis thaliana] (TAIR:AT5G04250.1); similar to OTU-like cysteine protease family protein [Arabidopsis thaliana] (TAIR:AT5G04250.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO18179.1); contains InterPro domain Ovarian tumour, otubain (InterPro:IPR003323) Range:  from: 806963    to: 809778    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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