Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->YAB1                       <-----------RAV1(2)                       <---------LBD16                    <---------ZAT2  <---------ICU4                    --------->GLK1(1)                    --------->At4g35610               <---------LBD16  --------->MYB46(3)       <-------TEIL --------->ZAT2 <---------YAB1 ---------->DOF2    <---------GLK1(1) <---------YAB1                    <---------At4g35610       --- ------>AHL20(2)    <---------At4g35610  <---------YAB1                 --------->At4g35610    <-----   ttaaaaagcttcatcgcctcggagctcagggagaaccatcattcttataggcatcccttgttcttctctaattcagcagaaacatgttcgatttgtgatg  801600                                                    --------------->AGL15                                                    <---------------AGL15                                                   ----------------->AG                                                   <-----------------AG                                                   <-----------------AGL2                                                   ----------------->AGL1                                                   <-----------------AGL3                                                   ----------------->AGL3                                                   ----------------->AGL2              --------->DOF5.7(2)                  <-----------------AGL1  --------->ATHB12             --------->TOE1(3)                  <----------DOF2           --------->ICU4     ---------->DOF2                           <---------ANAC58    <-------TEIL   <------ZmHOX2a(1)     <---------YAB1        <---------ANAC58   --------->CCA1(2)     --------->ANAC46 ---->TEIL   --------->TOE2(3)          <---------ANAC58  --------->DAG2--------->YAB1<-----------GT1 ----YAB1   ----------->GT1 ------->TEIL<---------ANAC58  <---------TOE2(3)--------->YAB1     <------   aatcaggaaaagaaacgttaacatgtgatgaatgcgaatttttcttgtgtctttccatataaggtgagatacaagaatgatgagcattttactcaacttt  801700                                                                                               ------                                         --------->YAB1                                        <-----                                         --------->ATHB12                                     -------                                         <---------ICU4 -------->P                            -------                                        --------->ICU4 <-----------GT1                      ---------                                        <---------YAB1 --------->WOX13(1)                   ---------                                        <---------ATHB12=======================================MYC_MYB                                        =================HOX2a_HOX2a                   --------->ALFIN1                                        <------ZmHOX2a(2) --------->TOE2(3)          <---------TGA1a                               <---------------------WRI1 --------->YAB1             <---------O2 ----DOF2                    --------->TOE1(2)    <------ZmHOX2a(1)                  <---------bZIP60(2)   acatatgaagaagacacaaatggagactactcgtgcgaagcgatcattgtgaggaatcaaccatattctatggatgcaaagaatgtgaagtggcactcca  801800              <---------YAB1                                                          <---------TOE2(3)              <---------TOE2(3)                         <---------GLK1(2)            <---------At5g28300  <---------TOE2(3)                          --------->SPL7                         <-----------GT1 --------->AGL15                            --------->STY1(1)                   --------->ARR11(3) ----------AGL15       >>>>>>>>>RAP2.2      --------->ALFIN1                    <---------ARR11(3) ---------->AGL2       --------->TOE2(3)    <---------STY1(1)                  <---------RVE1(1) ---------->AGL3  <-------TEIL              <---------MYB52(1)            ---------->DOF2 >ANAC58      <---------TOE1(3)            <---------SPL7               --------->YAB1<---------TOE1(3) >ANAC58--------->AHL20(1)   --------->AHL20(2)    --------->MYB52(1)   --------->AHL20(2)   tattaagaaatatgttaagattcaatctaaaaaaaataacatagccgtagggcaaacagattatttcatatcaataaaaagagattttacggtttttagt  801900                             <---------WRKY18(1)                  <---------ICU4                  <--------HAHB4                  --------->YAB1                  -------->ATHB1                                                                    <                  --------->ATHB51                                                                  -                 --------->ICU4 <---------MYB59                <-----------RAV1(1)               ----                 <---------ATHB51  <------------CBF          <------MYB83                        <---                 <---------ATHB12 ------>MYB46(1)            <------MYB46(1)                     ----           <----------DOF2  --------->WRKY12                <---------AtMYB61                   <----          <---------ANAC58  --------->WRKY38(1)          <-----------RAV1(1)                ---------          <---------ANAC58 <---------WOX13(1)        <----------DOF2                        <--------     <---------ICU4       <------------CBF         ---------->ID1                           ---------    <---------ATHB12     --------->ATHB12    <---------MYB52(1)<---------REM1(1)       --------->YAB1  --------->WOX13(1)<---------YAB1------>MYB83    <-----------GT1<------NtERF2        ------------>CBF   ttgccaatctttgctttcaattattattcattgaccaaattgtcttcgtttttttctttttgttggtgtcgcactatacatatattctatcaatataaat  802000     --------->TOE2(3) ---------AHL20(2) -------->AHL20(2) ----->AHL20(2) ------AHL20(1)              --------->WRKY12 ----->AHL20(1)           --------->TOE2(3) -----AHL20(2)        ------->GAMYB >AHL20(2)           --------->MYB46(3)                <---------YAB1 -AHL20(2)           <---------MYB52(2)           ------>ZmHOX2a(1)                               <-- -->TBP   --------->ANAC46*TSS                    <---------------AGL15 <-----------GT1  <----------DOF2   attttaatctaaacgtcgtctcaacaaacctttgacttcaaatttgttcttcctcttattagtcttcgtcatattttcttccttcttccatcttttagtt  802100                                                                          <---------AHL20(2)                     <---------ARR11(3)                                --------->AHL20(1)                     --------->ARR11(3)                                <---------AHL20(1)               --------->YAB1           --------->REM1(1)           --------->YAB1        <---------TOE2(3)             ------>ZmHOX2a(1)        >>>>>>>>>>WRKY63             --------- -------YAB1  <---------YAB1 --------->YAB1            <----------DOF2 <---------ARR11(3) <---------YAB1   ctgataagttaacattttcataagacctcaaaaatagctcctacatttgttatcttccttttcaagtcaacaatatttttttttgttctgttatcaaaga  802200                                                                                ---------->DOF2                                                                             ------>ZmHOX2a(2)                                                                            =========================                                                                            <------ZmHOX2a(2)                                                                           --------->ARR11(3)                                                                           <---------AGP1                                                                           <---------ARR11(3)                                                                   <---------ZAT18                                             <---------YAB1        <---------ZAT14    <----------DOF2                    --------->DAG2              --------->ZAT18 ------>ZmHOX2a(1)                    ---------->DOF2              --------->ZAT14 <---------------AGL15          <---------HSFB2a(2)           <---------ZAT14======================== ->DOF2                         --------->HSFB2a(2)   <----------DOF2  ---------->DOF2     ----------   ctccttcttttggtgattaaactctgttcaacttctgaaaaaaagttttgatttttcttttgtctgtagtacacaaagatctcaaaggtgagtttgtaat  802300              <-----------GT1            <---------DAG2            <----------DOF2    ---------->DOF2 --------->HSFB2a(2)                                  <---------------AGL15 ------>ZmHOX2a(1)<----------DOF2                     --------------->AGL15 <---------HSFB2a(2)                                 <-----------------AGL1 --------->LBD16 <---------DAG2                      <-----------------AG          <----------DOF2 =======HOX2a_HOX2a                                --------->GLK1(2)              <---------ICU4 =======HOX2a_HOX2a                 <-------TEIL  <---------GLK1(2)       ----------->GT1    -------- ->GT1   <-----------GT1    --------->YAB1   <----------DOF2           ---------->DOF2       <-------   ttcctcgaaagttactttacctttcttctatcacgaagttcatacttctttagattcttgtttagggaagacccaaaggtttaatctttagtataaatct  802400                                                         --------->GLK1(2)                                                        <---------GLK1(2)                                                 <-------GAMYB                                                <---------MYB46(3)                          <---------MYB59  <---------------AtSPL8     --------->MYB59 <----------DOF2       <---------TOE2(3)              ------->TEIL ->ARR11(3)--------->ANAC58    <----------DOF2  --------->MYB52(2)       <---------GLK1(2) --ARR11(3)--------->ANAC58    <---------DAG2  <-------TEIL              <---------CCA1(2)   tgcaagttaggccaagaaacattctttccctaacttttcaaaattagggttcgttacagaatttggggttttcttgaatctctaatttgattcgacaatt  802500  Previous    Next  AGI:  At5g03320.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G09830.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G09830.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO68919.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 802026    to: 804397    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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