Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <----------DOF2          ---------->DOF2                                       <-----------------AGL3    <---------GLK1(1)                                          --------->HSFC1(2)    --------->GLK1(1)                                          <---------HSFC1(2) -------->ANAC58                                               --------->HSFB2a(1) -------->ANAC58                                               <---------HSFB2a(1) -------->ANAC55(1)                                           ------->TEIL -------->ANAC46                                              <---------ARR14(2) ---------ANAC55(2)                                           <-----------ARR10 -------->ANAC55(2)                                           --------->ARR14(2) --------LBD16   --------->GLK1(2)                            <---------ARR11(1) -------ALFIN1  --------->WOX13(1)                           <---------CCA1(2) --->AtMYB61 --------->ANAC58           --------->TOE2(3)    <---------ARR14(1)    <---------YAB1 -->MYB46(3) --------->ANAC58          ----------->GT1<----------DOF2          <----------DOF2     <-   ccacggaattcacaaaggcaatctgtgatcatctctgaacatcgtaaaatccaattctttatcgaatcttcttttgggagccttttttatagcctcgaat  796000                                              --------->RAP2.6(3)                                   <                                           ---------->DOF2                                        <--                                     --------->ANAC58                                             <--                      --------->YAB1 --------->ANAC58                                             <--                  <---------YAB1     ----------->GT1                                 --------->AHL20(2)         <---------ANAC58           --------->DAG2                                --------->TOE1(3)<-         <---------ANAC58    ---------->DOF2 --------->MYB52(1)                   --------->TOE2(3)<- --------YAB1   <-----------GT1    ---------->DOF2                   --------->ARR11(3)         -----   tcttcttgttttcttgttttacgattagaataaaagaaaaagcaaaaaaacggctcttcatgagttttgaagttattgtttctgccttaaaatttctctg  796100  --------->DAG2 ---------->DOF2 --------->SPL7 ---------MYB52(1) -------ANAC58 -------ANAC58 -------ANAC46      --------->ZAT6                                        <---------ANAC58 --------RAP2.6(3)<<<<<<<<<<<<<<<<<LFY  <----------DOF2--------->At4g35610<---------ANAC46 --------SPL7  --------->YAB1--------->DAG2          --------->YAB1       <---------ANAC58 ->NtERF2     <-------TEIL  ---------->DOF2         <------ZmHOX2a(2)<-----------RAV1(1)       ------   ccgtaaggcaagaagattcataacactggaaaaagtgatgttctttctgaatcgatcagaagaattttgttttgttgcttgaattgtttacatactctta  796200                                                                                         <---------YAB1                                                                                      --------->ICU4      <---------ATHB12                           <----------DOF2                    --------->YAB1    --------->WOX13(1)                 <----------DOF2                 ----------->GT1<---------YAB1 --------->TOE2(3) --------->AHL20(2) --------->TOE2(3)          <---------AHL20(2)<---------YAB1 --->YAB1    <-----------GT1<-------TEIL      <-----------GT1    --------->AHL20(2)--------->ICU4   taacttcaatcagtttatcaatttcatacatacatccaaacctttttttttcttttcactcgtagaataaaatgagtaaattactatgattatgaatgaa  796300                                                                             --------->ZAT18                                                                           <---------------AtSPL8                                                                   ---------->DOF2                                                               <---------ZAT18                                                               <---------ETT(2)                                                            <------MYB46(1)--------------->AtSPL8              <---------ATHB12                              <---------DEAR3(2)                      <       --------->YAB1                                      <---------DREB2C(2)   --------->ICU4   ---     <---------ARR11(3)                     ------------>CBF<------MYB83---------->DOF2        <-----   atgacaaaatcatcaaatgaagaaaactcatacatttgtaaaccatttcaatacaaattagtcggtccacaaagaaaagagtactaatttagtttaaaaa  796400                                                  ------>MYB83                                                  ------>MYB46(1)                                                <---------ALFIN1                                                <---------MYB111(2)                                            <---------ZAT18                                         *TSS   <---------MYB111(1)                                         <---------MYB46(3)                                         <------MYB83                                        <---------TOE1(2)                                        <---------DEAR3(1)                                        <---------AtMYB61                                           -                                       <---------MYB52(1)                                          --                                      <-------GAMYB                                              ----                  ---------->DOF2    <---------MYB46(3)                                          <---               <---------------AGL15 <---------ANAC58                                           -----            <---------ARR11(3)       <---------ANAC46                    ---------->DOF2      <------            --------->GLK1(2) --------->YAB1--------->ZAT14             <---------YAB1        -------           --------->RVE1(1) --------->ICU4 <---------ZAT14          <---------YAB1           <------ ---------YAB1 --------------->AGL15 <---------ANAC58             <---------TOE1(3)           ------- ------>YAB1--------->ARR11(3)<---------ICU4--------->ZAT18       <---------YAB1          --------->ANAC46 ----ICU4--------->AHL20(2)--------->YAB1<------MYB46(1)          <---------TOE2(3)    --------->ZAT14   ttatacttaaaaaaaatctaaaaagagaataataatgtgtcgttggtgcaccaacttcccctcgagctaagattataaaggcaagacgcttcactcagca  796500                                       ------->TEIL                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                  --------->CCA1(2)                                 --------->ARR11(3)                <---------ICU4 -------->At5g28300              --------->ARR14(2)          --------->YAB1 --------->GT1                   <---------ARR14(2)         <-------TEIL ----->At4g35610                 --------->AGP1--------->TOE2(3)  <---------YAB1 ------At4g35610                 <---------ARR11(3)  --------->TOE1(3)  <---------ANAC58 ------>RAV1(1)                  <---------AGP1--------->AtMYB61  --------->ICU4 ---At4g35610             ------>MYB83<---------GLK1(2)   <---------GLK1(2)  <<<<<<<<<TBF1 -->At4g35610             ------>MYB46(1)      --------->TOE1(3)--------->YAB1 ---ZAT2                --------->AtMYB61      <---------MYB59  <---------ICU4 -->ZAT2       ------>NtERF2    <---------CCA1(2)    --------->TOE2(3)  <---------ANAC58           --   gcagtaactaaacttgcctccaaaaaccaatcccagatctgaatctcaacctaaacctcagattcatcatcatggcttcttcttctaactacgatggaat  796600                                           <---------ATERF1(1)                                          --------->DEAR3(1)                                          <---------DEAR3(1)                                         --------->ATERF1(1)                                       <---------DEAR3(1)                                      <------NtERF2                                      --------->ATERF1(1)                              <-------------                            --------->ARR11(3)                                        <---------DAG2                            <---------ARR11(3)------>NtERF2                      ------>ZmHOX2a(2)                       ------>ZmHOX2a(1) <------NtERF2                          <------ZmHOX2a(2)                   <---------ALFIN1  <---------RAP2.6(3)                       <---------ARR11(3)                   --------->ANAC46  <-----------HVH21                         --------->ARR11(3)                  ------>MYB46(1)    ------>NtERF2            ----------->GT1  <---------ARR14(2)                  ------>MYB83      <---------ANAC46          --------->ANAC58 --------->ARR14(2)                 <---------ALFIN1   --------->DEAR3(1)        --------->ANAC58<---------At4g35610  <-----------------AGL1   <---------GLK1(1) --------->DEAR3(1)               --------->At4g35610 ---->ZmHOX2a(1)------->GAMYB     ------>NtERF2    ------->TEIL --------->AHL20(2)    <----------DOF2   ccttctcggtatgggtaacccactcctcgatatctctgccgtcgtcgacgacgaatttctcaccaagtaaataaactctcagatccctctttttctattt  796700                   >>>>>>>>>>>>>>>>>LFY                  --------->ARR14(2)                 <---------CCA1(2)                                                        <---------ANAC46         <----------DOF2  ---------->ID1          <<<<<<<<<<MYB80                  <---------ZAT14 -----------ANAC81------->TEIL         <---------LBD16  ------->TEIL            <<<<<<<<<TBF1   gtttccaattccttttgctgtatccattgtcgctatctctctctgggattttggtttgaatctagatttgatagtttgattcttcttcagtggcataaac  796800                                                       --------->ANAC46                                                       --------->ANAC58                                                       --------->ANAC58                                                      <-------TEIL                                                     --------->ARR14(1)            <---------ANAC58                         --------->CCA1(2)            <---------ANAC58                        <---------ARR14(2)               --------->LBD16        <---------ANAC46                            --------->ARR14(2)             <---------LBD16        <---------ANAC58   <-----------RAV1(1)      --------->ARR11(1)        --------->GLK1(2)        <---------ANAC58  <---------TOE2(3)   ----------->HVH21              <---------GLK1(2)   tctgtgatttgtgtgcgttttttttgtttatgttgttctctaatcgtgttgacagatacgacatcaagttgaacaatgcgattctcgcggaagacaaaca  796900  Previous    Next  AGI:  At5g03290.1    Description:  isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative. Identical to Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial precursor (IDH5) [Arabidopsis Thaliana] (GB:Q945K7;GB:Q9LZG1); similar to isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G09810.1); similar to NAD-dependent isocitrate dehydrogenase alpha subunit [Brassica napus] (GB:AAO61642.1); contains InterPro domain Isocitrate/isopropylmalate dehydrogenase; (InterPro:IPR001804); contains InterPro domain Isocitrate dehydrogenase NAD-dependent, mitochondrial; (InterPro:IPR004434) Range:  from: 793973    to: 796181    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g03300.1    Description:  ADK2 (ADENOSINE KINASE 2); kinase. Identical to Adenosine kinase 2 (ADK2) [Arabidopsis Thaliana] (GB:Q9LZG0); similar to ADK1 (ADENOSINE KINASE 1) [Arabidopsis thaliana] (TAIR:AT3G09820.1); similar to adenosine kinase isoform 2S [Nicotiana tabacum] (GB:AAU14833.1); contains InterPro domain Carbohydrate/purine kinase (InterPro:IPR011611); contains InterPro domain Adenosine kinase; (InterPro:IPR001805); contains InterPro domain Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173) Range:  from: 796441    to: 799175    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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