Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------ARR14(2)                                           <-----------ARR10                               ----------                                           --------->ARR14(2)                          --------->ANAC58                                           --------->GLK1(2)                        <---------SPL7                                       <------NtERF2                               --------->TOE1(1) <---------MYB52(2)                   ------>NtERF2                                --------->TOE2(1)< ------>GT1                           --------->LBD16                      <---------CCA1(2)      <-- -At4g35610                          <---------LBD16       ------>ZmHOX2a(2)      --------->At4g35610 >ZAT2           <---------ANAC55(2) --------->LBD16==============HOX2a_HOX2a     <---------At4g35610 -ZAT2------------>CBF              <---------LBD16 ------>ZmHOX2a(1)   <----------DOF2--------->ANAC58 >At4g35610  *TSS--------->ANAC55(2)<---------HSFB2a(2)<---------YAB1  <---------DAG2 --------->SPL7-   gtaactaatccaatgggttatgtaatctacatatcgttcccggcgattcttctccttctgatcgtcgctatcgccttttatctcatcggacgaaaaatcg  793600                                                                        <---------ALFIN1                                                                        --------->AtMYB61                                                                  <-------PIF5                                                                  ------->PIF5                                                                 <---------At4g35610                                                                 --------->At4g35610                                                                 ----------->RAV1(2)                                                                <---------ATERF1(1)                                                                ------>NtERF2                                                             --------->LBD16                                                             ------>NtERF2 --------->DEAR3(1)                             --------->ARR14(2)  <---------MYB46(3)     --------->DEAR3(1)          -                             <---------ARR14(2) --------->WRKY38(1)    --------->MYB46(3)         <--                           <---------TOE1(2)   <---------MYB52(1)<---------ZAT2                   ---                        ------------>AtMYB77 <---------MYB46(3)<---------ALFIN1                   <--                      <-----------HVH21   --------->DEAR3(1)--------->ANAC46                     ---- <------NtERF2       --------->ANAC46    --------->MYB46(3) <---------HSFB2a(2)                  ---- >DOF2            --------->YAB1--------->ZAT6<-------GAMYB --------->HSFB2a(2)  --------->DAG2<----- ------NtERF2    <---------ATHB12        --------->DEAR3(2) <---------ATERF1(2) ---------->DOF2------ -------LBD16    --------->MYB46(3)     --------->SPL7      <---------ETT(1)--------->LBD16  -------- -------->LBD16--------->WOX13(1)  --------->MYB52(1)      <---------LBD16--------->ANAC46   --------   gccggagagaagggattcaatcaacgtcgcagttacactacggaccgccgttggctaattttccggcacctgcaccaccgcataaagctatggagaagcc  793700                                         <---------ANAC55(2)                                         <---------ANAC46                                         <---------ANAC58        <----------DOF2                  --------->ANAC55(2)    <------NtERF2                        <---------ANAC58    --------->ATERF1(1)          -------->HAHB4   ------>NtERF2                 --------->YAB1   <---------ZAT2          <---------TGA2(1)  --------->ARR14(2)       --------->bZIP60(1)  <---------ARR14(2)       --------->TGA2(1) -------->LBD16            <---------ANAC46         <---------DOF5.7(2) ----NtERF2                <---------bZIP60(1)   --------->TOE2(3) -------->RAV1(2)          ----------->GT1      <---------ANAC55(2) -------LBD16              <---------ANAC55(2)  <---------ANAC46 ----->MYB52(1)           ----------->STF1      <---------ANAC55(1) -->NtERF2 <---------ANAC46--------->ANAC55(2)  <---------ANAC58 ----ABI4(2)          --------->YAB1<---------ICU4--------->DOF5.7(2)        ----------->GT1 --->MYB46(3)   ------->TEIL    --------->ICU4  --------->ANAC55(2)       <---------ANAC58 ->ANAC58<---------ZAT14 <---------TGA2(2)      <---------ANAC58          <---------ANAC46 ->ANAC58--------->ZAT14----------->TGA1 <---------ANAC55(1)              <---------ANAC58          <   accggagccggtttagtgtatgtatgatgacgtaataatacttacgtattacgtaaacgttctatatatgtagtttgtgtgttaaataagatgtaattgg  793800                                                                              --------->SPL7                                                                            <---------SPL7                                                                            --------->LBD16                                                                           <---------ANAC55(2)                                                                           <---------ANAC58                                                                ----------->GT1                                                                <---------ANAC46                                                                <---------ANAC58      ------>MYB46(1)                                                                <---------ANAC58   --------->ANAC55(2)                                                      <---------ALFIN1     <---------ANAC58                                                  <------ZmHOX2a(1)       --------------->AtSPL8                                          <---------ANAC46 <---------ANAC58--------->ANAC55(2)               --------->YAB1 --------->ATHB12  <---------TOE2(3)         --------------->AtSPL3   --------->At4g35610       <---------YAB1     <---------TOE1(3)   --------->AHL20(2)------>MYB83 ---------At4g35610         <----------DOF2 <----------DOF2<---------ANAC58<---------ANAC46   gccgatgctgaaaccaattttaaaacaactctttattgggcctggggtttaaggaaacacttcgtgccgtttaaattccgtactcacctaatgcaaccta  793900                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    -                <---------LBD16                                                                     -              ----------->HVH21                         --------->PCF2                              <        <------NtERF2                        <-----------GT1     ------->GAMYB                     <-    --------->ANAC46          <---------ARR14(2)        ---------->ID1   *TSS    <----------DOF2   --    --------->ANAC58          --------->ARR14(2)   <----------DOF2    ---------->DOF2      --------->HSFB2a(2)    --------->ANAC58   >>>>>>>>>TBF1      <----------DOF2    <---------ALFIN1------>ZmHOX2a(1)   ----   gaaactacgcagcgttttgacggaagaagaaatattcgcttcttcttttacaacttttgtcccacaacgcagaaaagtcctctctttctctctctcgaat  794000                                                                   <---------At4g35610                                                                   --------->At4g35610                                                                  ------>NtERF2                                                                 <---------DEAR3(1)            ------                             <---------ANAC58                   --------->RAP2.6(3)           ------>ZmHOX2a(2)            --------->At4g35610                       <-----------ARR10                      <------ZmHOX2a(2) ---------AHL20(1)           <---------ANAC58         <---------ARR14(2)                    --------- --------ATHB1               <---------ANAC46         --------->ARR14(2)                    <-------- ---------AHL20(2)          <---------MYB46(3)        --------->GLK1(2)                     <-------- -------->AHL20(2)      <-----------RAV1(1)       --------->At4g35610    ------>ZmHOX2a(2)  --------- -------->YAB1       ------>ZmHOX2a(1)            <---------At4g35610----------->HVH21      --------- ---------ICU4       <----------DOF2              <------NtERF2<---------ATERF1(1)          <-------- --------YAB1   <---------ANAC58       ----------->HVH21      ----------->HVH21            <---------At4g35610 ------->ICU4   <---------ANAC58       --------->WRKY12     <---------ANAC58              ----------- ----->YAB1<-----------RAV1(1)         --------->WRKY38(1)  <---------ANAC58       <------ZmHOX2a(2)   aataatttttcatttgctgcgtccttttggtgcttgaagcgatgaccatggcagcaaatctagcgcgacggctgatcggaaaccgatcgactcagatcct  794100      <---------ZAT18      <---------ZAT14         <---------AGP1    --------->LBD16    <---------ANAC46   <---------ANAC46    <---------DEAR3(1)   <---------ANAC58   <-------TEIL   <---------ANAC58<---------At4g35610                              <------ZmHOX2a(2)  <------NtERF2    --------->ZAT2                           --------->AtMYB61 --->TOE1(2)       =====================================bZIP_DOF   <-----------HVH21 >AGP1--------->ZAT14--------->ALFIN1                      --------->MYB46(3) -GLK1(2)          <---------TGA1a                       --------->ANAC46                           < -ARR11(3)         <---------ZAT2<-----------RAV1(1)     <---------ALFIN1--------->LBD16           -- >ARR14(2)         --------->At4g35610                 ====================HOX2a_HOX2a           ---- >ARR11(3)       <-----------RAV1(2)                   ------>ZmHOX2a(1)--------->ANAC46         <--- -ARR14(2)       ============================RAV  <---------At4g35610  <---------LBD16<---------LBD16 >ARR10  --------->ZAT6<---------RAP2.6(2)   <----------DOF2<---------ALFIN1         ----------->RAV1(2)   tggagccgtgaactctagctcaggtgcggctagttctgtcgctagggctttctgctcctccaccactccgatcaccgcaactctcttccctggcgatggg  794200                 ------->TEIL                 --------->GLK1(2)                 <---------ARR11(1)                 --------->ARR14(2)              --------->DEAR3(1)           =====================================HOX2a_HOX2a           ------>ZmHOX2a(2)          <------ZmHOX2a(2)         --------->ARR14(2)                                                            <---------ANAC55(2)         <---------ARR11(3)                                                          <-----------GT1      --------->LBD16      --------->DAG2                                         <---------ICU4     --------->LBD16      ---------->DOF2                               <---------HSFB2a(2) <-----------HVH21     <<<<<<<<<WRKY18                                  --------->HSFB2a(2) <-------- ---------DEAR3(2)   <-----------HVH21                  --------->LBD16 --------->HSFC1(1)  --------- ---->ZmHOX2a(2) <---------ARR14(2)                   <---------LBD16   <---------HSFC1(1) <---------ARR11(3) ----->ARR14(2) <---------ARR14(1)              <----------DOF2        <---------LBD16 --------->ANAC55(2) ------ARR14(2) <---------GLK1(2)        ------>ZmHOX2a(1)  <---------GLK1(2)    --------->ICU4   atcggtcccgagatcgccgaatctgtcaaaaaggtccctcatcctaatctcttttctgcgcagaatttcgagttctggaagtcatagttacgagataatt  794300                                                                                       <---------ZAT2                              --------->ARR14(2)                                       --------->At4g35610                              --------->GLK1(1)          <---------ANAC46              <---------At4g35610          <---------------AtSPL3                         <---------ANAC58              --------->ZAT2   <---------WOX13(1)         <---------GLK1(1)          <---------ANAC58            --------->MYB46(3) --------->ATHB12             <---------ARR14(2)        ---------->ID1  <-----------RAV1(2) -YAB1    <---------------AtSPL8                       <-----------GT1 ------>ZmHOX2a(2)    <-------- >ICU4    --------------->AtSPL8                     ----------------------->TaNAC69(2)----------->RAV1(2)   gtttgattgaattttgtacgataatttgtgggaattcggcaattttgttgatagtttttgcgttttgtactgatccaggtgtttacaacagctggtgtac  794400                                            <---------ZAT14                        <---------ANAC58                                        <---------HSFB2a(2)                 --------->ARR14(2)                                        --------->HSFB2a(2)                 <---------ARR11(1)                                        --------->LBD16                     --------->GLK1(2)              --------->ZAT6         <------ZmHOX2a(2)            ---------->DOF2  <---------ANAC58      <---------------------WRI1     --------->CCA1(2)   ----------->HVH21  <---------ARR14(2)    <--   <---------ANAC58                 --------->AGP1      <---------------AGL15      <---------ANAC46   <---------ANAC46                 --------->ARR14(2)  =============================================   <---------ANAC58                 <---------ARR14(2) <---------ANAC58     <-----------ARR10     <--  --------->ATHB12 <-----------RAV1(1)------>ZmHOX2a(2)<---------ANAC58     ------->TEIL          <-- -REM1(1)    --------->ZAT18      ----------->ARR10  --------->GLK1(2)     <---------CCA1(2)---------   caattgagtgggaagaacactatgttgggactgagatagatccgagaacacagagtttcttgacatgggaaagtctcgaatctgtgcgtagaaacaaagt  794500  Previous    Next  AGI:  At5g03285.1    Description:  other RNA Range:  from: 793513    to: 793716    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g03290.1    Description:  isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative. Identical to Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial precursor (IDH5) [Arabidopsis Thaliana] (GB:Q945K7;GB:Q9LZG1); similar to isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G09810.1); similar to NAD-dependent isocitrate dehydrogenase alpha subunit [Brassica napus] (GB:AAO61642.1); contains InterPro domain Isocitrate/isopropylmalate dehydrogenase; (InterPro:IPR001804); contains InterPro domain Isocitrate dehydrogenase NAD-dependent, mitochondrial; (InterPro:IPR004434) Range:  from: 793973    to: 796181    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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