Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   --                                                                                                -----                                                                                                -----                                                                                          ------>ZmHOX2a(2)                                                                                         <------ZmHOX2a(2)                              <---------ZAT18--------->YAB1                             --------->ARR14(2)                            --------->At4g35610      <---------RAP2.6(3)                <---------ARR14(2)                            <---------At4g35610---------->DOF2                          ------->TEIL                         <---------ATHB12   <---------ATHB12                            <-----------ARR10                        ------>MYB83      ------>MYB83                      ---------->DOF2    ------        <----------ID1  ------>MYB46(1) <---------MYB59         --------->YAB1          <---------AGP1 ------->AHL20(2)      --------->WOX13(1) ------>MYB46(1)    --------->GLK1(1)     --------->MYB52(1)   ataaaacaatagaacaagtagaaaccaatcagcgaacatataccaaatcaaaagccgtaagagaaatcaaaacaacaccaaagagaaacggatctaaaca  773000                                                                                       <---------ARR11(3)                                                                   ------>ZmHOX2a(1)   --------->AHL20(2)                                                               <---------ARR14(2)--------->ANAC58                                                               --------->GLK1(2)--------->WOX13(1)     --------->TOE1(3)                                         --------->ARR14(2)--------->ANAC46     --------->TOE2(3)                              ------>ZmHOX2a(2)          ---------->DOF2 ------->ANAC58                                     ======================HOX2a_HOX2a--------->ANAC58 ------->ANAC58           ---------->DOF2         --------->ARR11(3)     <-----------GT1 ---->TOE2(2)      ------------------------>ANAC81<---------ARR11(3)<---------ICU4   --------->ANAC58 ---->TOE1(2)      --------->GLK1(2)    --------->DAG2   ------>ZmHOX2a(1)    <---------ATHB12 --->YAB1      <---------------------WRI1  --------->AHL20(2)  <---------ARR11(3)--------->ANAC58   taagaaacctaaaacagagagaatcgaacaaagaaaacacaaaaattgaatagatcgtccttgaaaatcctaatttcacaatcaagcaagaaattacaca  773100                                 <------ZmHOX2a(1)                                <----------ID1                              <---------ICU4                --------->MYB52(1)                              --------->YAB1             --------->ANAC46                     --------->TOE2(3)                  <---------------------WRI1                   <---------ARR11(3)                   <---------TOE2(3)      --------->ANAC58                  <---------GLK1(1)                  <---------WOX13(1)        --------->ANAC58                  <---------CCA1(2)            --------->At4g35610           ---------->DOF2             ------->TEIL    --------->ICU4    --------->ZAT2 <---------MYB52(2)     --------->ZAT6--------->ARR11(3)         --------->GLK1(2)         ----------->GT1           <--   gatgtaaacactacgaatcgatatcttagtaatcaggacaaaatttagaagctggattgacgaaacgaacaatattgtcaaaagcaatttatacaaaaga  773200                                       --------->YAB1                                  --------->ANAC58                                  --------->ANAC58                                  --------->ANAC55(2)                                  <---------ANAC55(2)                                 <-------TEIL                                --------->CCA1(2)                               --------->ARR11(1)                               <---------ARR14(2)                               --------->ARR14(2)                             ----------->ARR10         --------->ANAC46  <------ZmHOX2a(2)                                               --------->CCA1(2)   --------->YAB1         <---------ARR11(3)           --------->YAB1                     <---------ARR14(2)  <---------ATHB12       <---------GLK1(1)      ---------->DOF2    --------->TOE2(3)      --------->ARR14(2) -----TEIL        --------->DAG2--------->ARR14(1)   --------->GLK1(2) ---------->DOF2  ----------->ARR10   ttcaataatccacataacaaaaattggagatcagatacgaatcaaaaacaaaaagaatcagaaaatataccttgaaagagagagtcgcgagagatttgca  773300                                                                                =====================                                                                                <----------DOF2                                                              *TSS --------->ANAC46                                                         <---------YAB1   <---------ARR14(3)                                                       -------->ATHB1     --------->ARR14(3)                                                       <--------HAHB4     <---------ARR11(3)                                                       --------->ATHB51   --------->ARR11(3)                                                       --------->YAB1--------->ANAC46            <----------DOF2                     <------ZmHOX2a(1)<---------ALFIN1     <---------DAG2                       --------->ANAC58 --------->ARR11(3)   <---------------AGL15     <----------DOF2                      --------->ANAC58 <---------ARR11(3)   --------------->AGL15  ------>ZmHOX2a(2)                    <----------ID1  <---------ICU4--------->ANAC58 <------ZmHOX2a(2)                   ---------->DOF2  --------->ICU4 --------->ANAC58           -----   gagatcgctttaggctttgggagagattgaagagtcagaaaaagacgaaaggatgaattattatcttccacacgaaggtcttctttatatcgcaaaccaa  773400                                                                                     --------->ANAC58                                   --------->ARR11(3)                          <---------YAB1                                   <---------AHL20(1)                       <---------YAB1                                   --------->AHL20(1)                     <------ZmHOX2a(1)                                   <---------ARR11(3)                   <---------TOE2(3)                                  --------->RVE1(1)                 <---------At4g35610     =========                              --------->AHL20(2)                    --------->At4g35610     ---------                        --------->YAB1                         --------->GLK1(1)     --------->ANAC58                   <---------YAB1 --------->CCA1(1)            --------->CCA1(2)     --------->ANAC46                 --------------->AGL15                         <---------GLK1(1)     --------->ANAC55(2)                <-----------------AGL3<----------DOF2         <---------ARR11(3)     <---------ANAC55(2) ================================MADS_MADS                    --------->ARR11(3)--------->YAB1 ----->DOF2 <----------DOF2   <---------AHL20(2)      ---------->DOF2   <---------TOE1(3)   ---------   aagcccaaaaccgtcttttctattaatgagaataaaatatctttagccaaaacaaaaaaaggaagatatcagttgaggattattatcacgaaactaaagg  773500                <-----------HVH21             <---------O2                                                              <------MYB83             --------->O2                                                      <--------P             <---------ANAC58                                                 <-------GAMYB             <---------ANAC46                                                <---------MYB46(3)             <---------TGA1a                                                 --------->MYB111(2)             ========================================bZIP_DOF                --------->MYB55(2)             <---------ANAC58                                               <---------AtMYB61             <---------ANAC55(2)                                          <---------MYB46(3)             <---------ANAC55(1)                                         <---------AtMYB61             --------->ANAC55(2)                                         --------->ALFIN1            <-------TEIL                                              <-----------RAV1(1)    --------->YAB1                <---------ANAC58                    <---------AtMYB61<------MYB46(1) ======================bZIP_DOF   <---------ANAC58------>MYB83<---------HSFC1(2) <------MYB46(1) ->DOF2 <---------YAB1  <-----------GT1   ---------->DOF2     --------->HSFC1(2) <------MYB83 >MYB52(1) --------->CCA1(2)  --------->DEAR3(1)  ------>MYB46(1)   ------>ZmHOX2a(1) --------->MYB59   aaggaatcatatgatacgtgtcatattttccaccgtgcgtttttaaaagaccgactcaagtagaaacatcctatggtggtggttggattaggtcatccat  773600                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                             <------ZmHOX2a(1)                                                                                            <--------                                                       <---------ICU4                      <---------TOE2(3)                                                      <---------ATHB51                    --------->YAB1                                                      <---------ATHB12               <---------------AGL15                                                      <---------AHL20(2)             <---------ATHB12                   <-----------GT1                    --------->AHL20(2)            <----------------           ----------->HVH21            <-----------GT1--------->AHL20(2)           <----------------       <---------ZAT14        <----------DOF2    ------>ZmHOX2a(1)                <---------AHL20(2)      <----------DOF2       ---------->ID1      --------->TOE2(3)                 --------->AHL20(2)    --------->At4g35610    <-----------GT1 <----------DOF2       <----------DOF2 --------->AHL20(2) <---------At4g35610      <<<<<<<<<<GT-3b  <---------DAG2    <----------DOF2     <---------AHL20(2)   tacatctgcttcactgacatttttctatttttctttttgtatatacttttcctcaaataatttctttcttttctatagaagaatttaatcaataaggaaa  773700                                                                        --------->AHL20(2)                                                                    --------->AHL20(2)                                             ------>MYB46(1)     <---------ICU4                                             --------->ANAC58    --------->YAB1                                             --------->ANAC58   --------->ICU4                                             ------>MYB83       <---------ATHB12                                             >>>>>>>>>MYB98   --------->WOX13(1)          <---------ARR11(3)                 -------->P    --------->ANAC58 ------------AtSPL8                         ------>MYB46(1)--------->ANAC46 ----->DAG2             --------->ZAT6      ------>MYB83<---------KAN4(2) ----->DOF2--------->GLK1(2)    <---------ANAC46       --------->YAB1  <---------AHL20(1) --ID1    <---------GLK1(2)     <---------ANAC58     <---------TOE2(3) --------->AHL20(1) -AG      --------->ARR11(3)    <---------ANAC58    --------->YAB1 <---------YAB1        --------->ZAT6 -AGL1---------->DOF2  <---------TOE2(3) --------->ANAC46  --------->ANAC58       <---------ARR14(2)   aagttcaaaaaagattctttccattaagactatgtcttggttaacccaacccattaagaataagcaatcataatatatatagagaatactaatactatat  773800                                                         <---------YAB1                             <---------YAB1             <-----------GT1                           --------->YAB1             --------->AHL20(2)            <---------AHL20(2)                        <---------AHL20(2)            --------->AHL20(2)--------->YAB1      --------->AHL20(2)         <----------DOF2   <---------ICU4         <---------AHL20(2)         --------->GLK1(2)     --  <---------ARR11(3)      --------->ICU4         --------->AHL20(2)         <---------GLK1(2) -------  --------->ARR11(3)   <---------YAB1         --------->ATHB12          ---------->DOF2    --------->YAB1   atgagatttttcttttaatttcatgttgattatgatagtttatcttcttgatttaatttatcaatacttggcataaaagattctaatctactctaataaa  773900  Previous    Next  AGI:  At5g03240.1    Description:  UBQ3 (POLYUBIQUITIN 3); protein binding. similar to UBQ4 (ubiquitin 4), protein binding [Arabidopsis thaliana] (TAIR:AT5G20620.1); similar to polyubiquitin [Thlaspi caerulescens] (GB:AAY86773.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 771751    to: 773362    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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