Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <------MYB83                           <---------GLK1(1)             ------>NtERF2  <------MYB46(1)           <--           <---------ARR11(3)                   <---------ZAT14     <---------TGA1a              <---   --------->ICU4   --------->ALFIN1<------ZmHOX2a(1)  <---------ANAC58<---------TOE1(2)    <------ZmHOX2a(1) ---------->DOF2---------->DOF2   <---------ANAC46     <---------ANAC58<---------TOE2(2)  --------->ALFIN1 --->ANAC81--------->ARR11(3)  --------->ALFIN1 --------->ZAT14     <---------O2         <------ZmHOX2a(1)   acataaagatgaagattttaaagagggggaaatgtggaggagactcacagtatagttgcctccaaaacagacgtaggtgccttcaatcggaggaggaggt  768500                                                                     <---------At4g35610                                                                 --------->ANAC46                                                                 <---------ANAC55(2)                                                                 --------->ANAC55(2)                                                                <-------TEIL                                                              --------->ARR14(2)                                                              <---------ARR14(2)                                                             <------NtERF2                                                           <---------ANAC46                                                          <------NtERF2<---------REM1(1)    ---------                                                          --------->ATERF1(1)     <-----------GT1                                                        <---------DEAR3(1)       --------->KAN4(2)                                                        --------->ALFIN1        --------->ATHB51            <---------TOE2(3)                          --------->ATERF1(1)     <---------YAB1       -   --------->At4g35610                              ----------------------->TaNAC69(2)      <-------- <------ZmHOX2a(1)                      ----------->GT1<------ZmHOX2a(1)       --------->ICU4<------ZmHOX2a(2) ---------RAV1(2)          --------->ICU4      <-----------RAV1(1)   --------->At4g35610    --------- ----TEIL   <---------TOE1(3)   --------->REM1(2) --------->ALFIN1  ------->TEIL<---------ICU4     --   tcaggagcagaattagggttttctgagtaatccttgtagagtctgtaatatggtggaggaggcggatacgtagctgtagccattattccctacagatcca  768600                                                            --------->MYB52(1)         --------->ANAC58              <---------TOE1(3)   ------->GAMYB                          --- >ARR14(2)                     ------>ZmHOX2a(1)          <---------MYB52(2)          <---------ZAT14 -------->AHL20(2)            --------->TOE2(3)           --------->MYB46(3)          --------->ZAT14 -ARR14(2)                 --------->GLK1(2)              <---------MYB55(2)         <----------DOF2< >AGP1   --------->ANAC58 <---------GLK1(2)          --------->AtLEC2       <---------ARR11(3)   <--- ------->AHL20(2)    --------->MYB52(1)<---------TOE2(3)----------->RAV1(1) --------->GLK1(2)  <-----   aataaaaaactaagcaaaatcagtaacagattcctaaaattaaggtttctaatcgatgcaacaaacgattcaatccaaaatctaagactttactccaacg  768700                                                                                      <-----------GT1       <---------AHL20(2)                                                          --------->YAB1      --------->AHL20(2)                                                          --------->ICU4 <---------HSFB2a(2)                                                        ----------->GT1 --------->HSFB2a(2)                                 --------->ANAC58     --------->GLK1(2) ------>GLK1(2)           ---------->DOF2            --------->ANAC58     --------->ARR14(2) ---------LBD16   --------->YAB1       <---------ZAT6--------->ANAC46    --------->ARR14(2) ------GLK1(2)   --------->MYB46(3)   <---------TOE2(3)                  <---------ARR14(2) ----ATHB12      <---------ATHB12     <---------TOE1(3) ------->TEIL     <---------GLK1(2)   attctggataaaatttgcaaccatggtacaaagagaaattagggttaacaaaaacacgaacctattgggaatgcagaatcggaaattataaccagacgag  768800                                                           <---------ICU4                                        <---------ANAC46   --------->YAB1                         <--                 <---------YAB1        <------NtERF2      <---------ATHB12                        ---              <----------DOF2        <---------DEAR3(1)   <---------ATHB51                        <--    <------ZmHOX2a(2)     <----------DOF2           ----------->GT1                              <---   --------->ARR11(3)    <---------ANAC58 <------NtERF2 *TSS ----------->TGA1        ----------->GT1   <---------ARR11(3)    <---------ANAC58 --------->ALFIN1--------->ICU4    <---------YAB1       <---   aataagatcgaagaagcttttgattttgctttggagaagacggcgtagagcaagaggtcaataatgacgaaacgagttttgattttctcgtaaattttcg  768900            <---------DEAR3(2)            <---------MYB46(3)            <---------HSFB2a(1)            --------->HSFC1(2)            <---------HSFC1(2)            --------->HSFB2a(1)           <---------DEAR3(1)        ----------->HVH21        <---------SPL7 <---------ANAC55(1) <---------ANAC58 <---------bZIP60(2) <---------ANAC46                                                   <----------DOF2 <---------ANAC55(2)                                               <---------ANAC58 --------->ANAC55(2)                                               <---------ANAC58 <---------ANAC58                                          <<<<<<<<<<<<<<<<<LFY             <-------- -------MYB52(1)                                        --------->AHL20(2)                <---------At4g35610 ------>ARR14(2)                                        <---------AHL20(2)                --------->At4g35610 -------ARR14(2)<---------ANAC46                        --------->YAB1                   <-----------RAV1(1) --------HVH21 <-------TEIL                         <---------AHL20(2)               <---------GLK1(1) ----GAMYB--------->SPL7         <----------DOF2    --------->AHL20(2)       <---------AHL20(2)   gttacgtgttcggacggttcgtataagtctggtttcttttggtttagtttcggtttaattaaaacaatggcttttcagtttaattcgatttctgctgttt  769000                                                                                       <---------AHL20(2)                                                                                      --------->ARR11(3)                                                                              <---------AHL20(2)                                                                              --------->AHL20(2)                                   <---------ANAC58                          --------->AHL20(2)                        ----------->GT1                                    --------->YAB1     <------                      --------->YAB1                          <---------AHL20(1)      <---------ARR11(3)                     <---------ATHB12          <---------AHL20(2)     <---------DAG2  <---------AHL20(1)                     --------->ICU4--------->ANAC55(2)        --------->ARR11(3)      --------->AHL20(2)                    <---------TOE2(3)    <-----------GT1      <---------ARR11(3)      --------->AHL20(1)            --------->ANAC58       <---------ANAC58           --------->AHL20(1) --------->AHL20(2)            --------->ANAC58      <---------TOE1(2)          <---------AHL20(2)  <---------AHL20(2)            --------->ANAC46      <---------TOE2(2)         --------->ICU4<---------YAB1 <---------AHL20(2)  <---------YAB1   --------->YAB1<-----------GT1       ----------->GT1<----------DOF2 <---------AHL20(2) --DOF2   <-----------GT1    <---------YAB1    --------->AHL20(2)  <-----------GT1   --------->AHL20(2)   ggatgtgattaatcaccccactaatgatgttattcttacgtttttacatttaaaaaatagtaaatatttttactttataataaataaatatattttttgt  769100                                                         --------->AHL20(1)                                                         --------->AHL20(2)                                                         <---------AHL20(2)                                                        --------->AHL20(2)                     --------->AHL20(2)         --------->YAB1                     <---------AHL20(2)      --------->YAB1         <---------AHL20(2)                 <---------YAB1                                       ----       <---------RVE1(1)                   <---------AHL20(2)                                    <---      --------->ARR11(3)                --------->AHL20(2)                       <---------CCA1(2) --      <---------ARR11(3)                <---------AHL20(1)                --------->AHL20(2)   <-----      <---------GLK1(2)   ----------->GT1  --------->AHL20(2)       --------->At4g35610     --------- ---ANAC46          --------->AHL20(2)  --------->AHL20(1)   --------->AHL20(2)--------->YAB1 -------   gtattctagatttttttgtcaatttaaatagaaattaacaaatattttaataacaaaaaaaaattaaaacagctaaaaaaatcatatctaacaacattaa  769200   <---------TOE2(3)   <---------YAB1 ----->ARR11(3)                                                --------->YAB1                    <--- ------ARR11(3)       ---------->DOF2                      <---------YAB1            --------------->AGL15 ------->TOE2(3) <---------AHL20(2)                   <---------ICU4                 <---------------AGL15 ----AHL20(2)   <---------AHL20(2)                   <---------YAB1        --------->DAG2      ------ >TOE2(3)       --------->AHL20(2)              --------->YAB1<---------YAB1      <-----------GT1---- -->AHL20(2)--------->AHL20(2)       <---------ICU4--------->YAB1         ---------->DOF2  <---------TOE2(3)   atcttaagataacttaaattaaatcaaagacgaagataaaaattccattaacatcatcattttgatcataaactcataaagtttttactatttaagaaaa  769300                                     --------->ANAC58          --------->TOE2(3)         <------ZmHOX2a(1)           --------->ANAC58          <---------DAG2     <-----------GT1     ---------->DOF2            --------->At4g35610  <---------ANAC58   <----------DOF2 -------ID1              ---------->DOF2       --------->TOE1(2)        <---------DAG2       -------- ---->DOF2------------------------>ANAC81--------->YAB1     <---------ALFIN1     <-----------GT1<---- ------->GT1 ----------->GT1    <---------At4g35610  <---------ANAC58<-----------GT1    <----------DOF2   agaaaaacaaaggacgagtgaaacaaaaaaagagagctcacgataagaacgtgagacttgccacaccttataaacttttttttttatcttcttttgtact  769400  Previous    Next  AGI:  At5g03220.1    Description:  transcriptional co-activator-related. similar to transcription coactivator [Arabidopsis thaliana] (TAIR:AT5G03500.1); similar to transcription coactivator [Arabidopsis thaliana] (TAIR:AT5G03500.2); similar to unknown [Brassica rapa] (GB:ABL97954.1); contains InterPro domain MED7; (InterPro:IPR009244) Range:  from: 767488    to: 768856    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version