Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <-----------GT1      <---------AHL20(2)      <---------YAB1     --------->YAB1     <---------AHL20(1)     --------->AHL20(2) -------->SPL7 ------>ZAT18                                                                                  ------ -------ZAT18                    --------->AHL20(1)                                         <-------- ------ANAC46                    --------->AHL20(2)                                         --------- ------ANAC58             --------->AtLEC2                                                  --------- ------ANAC58<----------DOF2    --------->AHL20(2)                                          --------- ---------->AtSPL8     --------->MYB46(3)    ------>ZmHOX2a(1)                              --------- ---------->AtSPL3   <-----------GT1        --------->TOE2(3)    --------->AHL20(2)         --------- -----------AtSPL8<-----------GT1<---------AHL20(2)       <---------TOE2(3)           <------ZmHOX2a(2)   cgtacaatattatttcttttttacaaccattcaaaaaaattagtttcctaaaaactttttaagaaaattaaaacagaaactacttgggatcaacacgtat  758000                 --------->CCA1(2)                <---------ARR14(2)                --------->ARR14(2)             --------->ANAC55(1)                               <---------ICU4       ------>MYB46(1)                                         --------->AHL20(2)     --------->DEAR3(1)                                        <---------AHL20(2)     --------->AtMYB61                                         --------->ATHB51     <---------ALFIN1                                         <---------YAB1    --------->MYB46(3)                                        --------->ICU4  <-----------GT1--------->GLK1(1)                          <---------ICU4 ->TEIL------>MYB83                     ------->GAMYB       --------->YAB1 -ANAC55(2)  --------->ANAC58          --------->MYB46(3)  <---------ATHB12 >ANAC46 <---------ALFIN1            ----------->RAV1(1)   --------->AHL20(2) >ANAC58<---------MYB55(2)   <---------ZAT14               <---------AHL20(2)                 <------ >ANAC55(2)  --------->ANAC58--------->REM1(2)             <---------ATHB51                --------->PCF2 >ANAC58--------->MYB46(3)   --------->ZAT14               --------->ICU4                 <---------PCF2 >ANAC55(1)<---------ALFIN1 --------->ALFIN1         --------->TOE2(3)                 --------->ALFIN1   gtgttcaccacccacacggatatggacactgtgtagggacaacagccaaattcaacatcaaataattatttcgaaggcacagacaataagtgggagccac  758100                                                                                    <------MYB46(1)                                                                                   --------->MYB46(2)                                                                                   --------->MYB111(1)                                                                                   --------->MYB59                                                                                   --------------->AtSPL3                                                                                   --------------->AtSPL8                                                                              <--------P            --------->ARR11(3)                                          --------->ATHB12            --------->AHL20(1)                                         --------->ICU4               -            <---------AHL20(1)                                    --------->MYB52(1)<------MYB83    < ---ALFIN1 --------->YAB1             <-----------GT1   <---------YAB1 <---------YAB1              <-   tcgtttttgtcaaaaatattgaataacaaattagcgatataaacaattctcacttattctgtttaaaaaaacgattattggtagtttggtactactactc  758200                                                                                             --------                                                                                          <-------MYC2                                                                                          ------->MYC2                                                                                          ------->PIF5                                                                                          <-------PIF5                                                                                          ------->MYC3                                                                                          <-------MYC3                                                                                         --------->O2                                                                                         <---------ANAC58                                                                                         --------->ANAC55(2)                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                         ============                                                                                         ============                                                                    --------->ZAT6       ============                                                         <---------WRKY12                <---------ANAC55(2)                                                        --------->WRKY18(1)              <---------TGA1a           --------->ARR11(3) --------->ANAC46         --------->At5g28300               --------->TGA1a   --------->YAB1        --------->ARR14(2)            <-----------HVH21          <---------ANAC58  <  <---------YAB1        --------->GLK1(1)             ----------->GT1     --------->YAB1 <---------bZIP60(2) -------->YAB1       --------->ANAC58              --------->MYB52(1)--------->TOE2(3)   <---------O2 ---------ICU4       --------->ANAC58          --------->YAB1      <---------TOE2(3) <-----------HVH21 --------ATHB12--------->AtLEC2             --------->YAB1        <-----------GT1 <---------ANAC58<--   aataatcatagaagaccatgaaaacgaaatccacgtagtatgtgtataatcacaaacggtcaaacatttaacattagcataaattcttgtcacgtggcaa  758300                  <---------TOE2(3)                  <---------YAB1       --------->At5g28300    --------->At4g35610       <------NtERF2          <---------At4g35610       <-------GAMYB         --------->MYB52(2)      <---------MYB46(3)   <--------P     <---------RAP2.6(2)   <---------MYB52(1)     <---------ANAC46     <-------GAMYB ---->CBF        <-----------GT1 ===================================MYC_MYB ==============MYC_MYB   <---------MYB46(3)   ----------->GT1                                -------- ==============MYC_MYB  <---------TOE2(3)<---------AHL20(2)                                  -------- -----------RAV1(1) <------------CBF    --------->AHL20(2)    ------>ZmHOX2a(1)              -------- ----------CBF <---------AHL20(2) --------->REM1(1)---------->DOF2       *TSS  --------->LBD16   tattgtggcggtagaattttaacattgtggttagcttcaccattaaatctgttaaaagcgcttcctcactcactcttcttccccaaaaaaaaaacaagac  758400            --------->ANAC58            --------->ANAC58                   <---------ICU4        --------->GLK1(2)        --------->GLK1(2)             <---------ARR11(1)          --------->ANAC58               ---- <------ZmHOX2a(1)--------->TOE2(3)   ------->TEIL                --------->ANAC58               ---- ->ANAC58   --------->ANAC46<---------ALFIN1--------->YAB1      --------->YAB1               -------- ->ANAC58   --------->ANAC55(2)       --------->GLK1(2)        <---------ATHB12              <------- ->ANAC46   <---------ANAC55(2)      <---------ARR14(1)   --------->YAB1          <----------DOF2----   agaggaagagaatcacgaaaccatagtcccaaacccttcgaatctataagcatttctcaaacacaatcaagaaactgtgtttagcttttagatttctaca  758500                                                ----------->GT1            <---------GLK1(2)                 --------->SPL7          ----------->ARR10 <-----------GT1  --------->MYB52(1) ----->ANAC46         <----------DOF2       <---------SPL7 ----->ANAC58     ---------->ID1           ------>ZmHOX2a(2)     <---------DEAR3(1)         --------- ->HSFB2a(2)<---------ARR11(3)           <---------ARR14(2)   <---------DEAR3(1)            <-------- --HSFB2a(2)--------->ARR11(3)         <---------MYB46(3)    --------->SPL7          ---------------- ----->ANAC58--------->GLK1(2)   <---------AtLEC2--------->At5g28300            <---------TOE2(3)   <   agcatgtaagacgagattttgtttcttttttttctgcatggtggatcgaacggtgagaatggggacggaggtgaagtcgattagggttccaagaagggtc  758600                             --------->O2              <---------ARR11(3)      <------ZmHOX2a(2)      <---------O2 --------->AtMYB61      =============================HOX2a_HOX2a                    --------->ANAC46             <----- >HSFC1(2)    --------->ARR11(3)<---------DEAR3(1)         --------------->AtSPL8              ------ -HSFC1(2)   --------->CCA1(1)  <---------MYB46(3)    --------->LBD16                   <----------DOF2 ->AGL1      --------->RVE1(1)  --------->MYB55(2)   <-----------RAV1(2)           <-----------GT1 ---------ANAC46            ------>ZmHOX2a(1)      ------>ZmHOX2a(1)    <---------GLK1(2)      ------   tggtttggatcacaaatatctatagttctcctcgtgggtggaaaccatacctcctccaggttttgtactcgctagattcttcgattttctctttgcgatt  758700                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <               ------>ZmHOX2a(2)                                  --------->At4g35610               <              <------ZmHOX2a(2)                                   <---------At4g35610               -             <---------ARR11(3)                                   <---------ZAT2                    <             --------->ARR11(3)                      <---------YAB1                                 -             <---------AGP1                          <---------TOE1(3)                             -- <----------DOF2                                     <---------TOE2(3)                          ----- ----ARR14(2)--------->AGP1--------------->AtSPL3 <---------AHL20(2)  XXXXXXXXXXXXXXXXXXXX>MIR395A/D/E --->GLK1(2) --------->ARR14(2)             --------->YAB1        --------->ZAT2           ---------- --->ARR14(2)<---------ARR14(2)          --------->YAB1 --------->GLK1(2)            <---------ATHB12   cttctttgttcttaagatctgtttagcaaatcgtactagacattaatcatattttaagattccatcggagctgaagtatttgaagaaatcaatgggtata  758800                            ------>ZmHOX2a(2)                           <---------GLK1(1)                          --------->ARR14(2)                          <---------ARR11(3)               --------->ARR11(3)               --------->ARR14(2)  ------>ZmHOX2a(2)       --------->ARR11(3) <------ZmHOX2a(2)        <---------ARR14(2) -------->ARR14(3)        <---------AGP1 -------->AGP1 <-----------ARR10 ---------AGP1 <---------ARR11(3) ---------ARR14(2)       <---------CCA1(2)                    <---------ICU4 ---------ARR14(3)    <---------LBD16                        <---------YAB1                <--------- -------->ARR11(3)    --------->LBD16              <---------ANAC58                  ---------->ID1 ---------ARR11(3)   <---------ANAC46              <---------ANAC46             <-----------RAV1(1) -------->ARR14(2)   <---------ANAC58              <---------ANAC58     <---------ZAT14  <----------DOF2 ------->RVE1(1)     <---------ANAC58           <---------MYB52(1)      --------->ZAT14  ============ ----->DOF2   --------->RVE1(1)   --------->ARR14(2)       --------->YAB1 <----------DOF2<---------MYB52(1) ->GT1        --------->CCA1(1)   <---------ARR14(2)  <---------ZAT18   --------->At4g35610<---------MYB46(3)   aagatcttgaagcttaatatcttccgtggatctacgaataggcatgctctgtttcgtgctctcatcatcgcctctgctctatctgttgtccctttgttgg  758900  Previous    Next  AGI:  At5g03190.1    Description:  CPuORF47 (Conserved peptide upstream open reading frame 47). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G53400.1); similar to hypothetical protein MtrDRAFT_AC148995g28v2 [Medicago truncatula] (GB:ABD32814.1); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335) Range:  from: 758373    to: 760381    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version