Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                     --------->LBD16                                <                                                   <---------LBD16                                 --                                          <---------MYB52(1)                                      <--    <---------At4g35610            <---------YAB1<-----------GT1    <---------GLK1(1)            <--- --------ANAC58      <---------HSFB2a(2) ----------->GT1            --------->GLK1(1)            ---- --------ANAC58      --------->HSFB2a(2)--------->MYB59           <------ZmHOX2a(1)   ----------->GT1   agcttgagcacagcaagtttcttcgagagtagggtttttgattcggtaatttcaccggagtaagaataggatttcgccgaaaacgaattggttaatttgg  721500              --------->ANAC58              --------->ANAC58             --------->DEAR3(1)             --------->ATERF1(1)             --------->MYB46(3)            <---------ATERF1(1)            <------NtERF2            --------->ATERF1(1)           --------->PCF2           ------>NtERF2           <---------ATERF1(1)  <---------MYB52(1) ---------ANAC58           ---------->DOF2                       <---------AHL20(2) ---------ANAC58   --------->ANAC58 --------->ANAC58    --------->ARR14(2) ---->ZmHOX2a(2)   ----------->RAV1(1)*TSS              <---------ICU4 ----ZmHOX2a(2)    --------->ANAC58 --------->ANAC46    <---------ARR14(2) ------ARR14(2)<------NtERF2        --------->ANAC58 --------->YAB1 ----->ARR14(2)------>NtERF2    --------->CCA1(2)------>NtERF2   --------->AHL20(2)                --   atccgttccctcgcgcccgcccagcaaaaaaaagaaacacgaaaattttgccgactcatatttgcatataatttcatattagtccctagtatttccaagt  721600                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                    <---------DAG2              ------->GAMYB                                      --    <---------AHL20(2)     ------------>CBF    --------->MYB46(3)                                  <-   ----------->TBP  <----------DOF2         <---------WRKY12                                      ---   --------->AHL20(2)    <-----------GT1   <------ZmHOX2a(2)        <----------DOF2             ----- ---------->CBF  <-----------GT1  ----------------->AG       --------->ANAC46      <-----------RAV1(1)   atacaataaatagcccatttaactttattaccaatttccgaatggatcaacgatcgtggtttcacgaagtctttgacattcgcctatgttgcaaactaaa  721700                                                                                               ------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                         ----------->HVH21                                                                                        <-----------HVH21                                                                                      <-------MYC4                                                                                      ------->MYC3                                                                                      <-------MYC2                                      --------->At5g28300                             -------->ABF1                                  <---------ALFIN1                                    <-------MYC3                              <---------ANAC46                   <-----------GT1      ------->MYC4                              <---------ANAC58             ----------->GT1            ------->MYC2                     <---------MYB46(3)<---------MYB52(1)<-------MYC3                <---------TGA1a                 <---------ICU4  --------->SPL7          ------->MYC3                <---------ANAC55(2)                 --------->ATHB12<-------TEIL            ------->MYC2                --------->O2          <XXXXXXXXXXXXXXXXXXXXMIR169D-G                 <-------MYC2                --------->ANAC46    <---------bZIP60(2)       <---------ANAC58         ------->TEIL                  --------->ANAC55(2) ------->YAB1   <---------YAB1<---------ANAC55(2)   --------->ANAC58                 <---------O2 --------ICU4   --------->ICU4--------->ANAC55(2)   --------->ANAC58                 --------->TGA1a ------>ICU4  --------->YAB1 --------------->AtSPL3 <---------ANAC46          <---------YAB1--------- ---->YAB1------>NtERF2   <----------DOF2        ----------->HVH21          --------->YAB1  ---------   ataatgacatggcgactcatcattggttctttacgtacaccgtaatctaatgtgacgcatgtggtaataactcttgtgtcataatacacgtgtcacgcat  721800                                           <---------DAG2                                           <----------DOF2                                          <---------ANAC58        *TSS                                          <---------ANAC58      <---------MYB52(1)                                     <---------ZAT2            <-----------HVH21      ------>ZmHOX2a(2)              --------->At4g35610       <-----------TGA1    --------->ARR14(2)               --------->ZAT2           --------->ANAC55(2)    --------->ARR11(3)               ----------->RAV1(2)      --------->ANAC46    <---------ARR11(3)           --------->MYB52(1)      <---------DAG2 ->TEIL                         --------->ANAC46         <----------DOF2 >ANAC46                     --------->ZAT14           ------>MYB83                                 < -ANAC55(2)                  <---------ZAT18           ------>MYB46(1)                 <---------HSFB2a(2) >ANAC55(1)                  <---------ZAT14          <---------ALFIN1                 --------->HSFB2a(2) >ANAC58             --------->ICU4--------->DEAR3(1)--------->MYB46(3)      <-------TEIL      ------ >ANAC55(2)    --------->LBD16  <---------ALFIN1    --------->ANAC58<---------DAG2   <---------HSFB2a(2) >ANAC58------>ZmHOX2a(1)    --------->ZAT18        --------->ANAC58<----------DOF2  --------->HSFB2a(2)   ccacatgatcctcttccctgaacatgatgagttcacaccggctggctttttctcacccacttttccgtcactttctcggttcattttctcgagaaaataa  721900                                                                                           --------->ZAT2                                                                                           <---------At4g35610                                                                                        <---------At4g35610                               <---------GLK1(2)                                        --------->ZAT2                               <---------ARR14(2)                              ------>MYB83--------->At4g35610                       ---------->DOF2                               <<<<<<<<<WRKY18    --------->At4g35610                      --------->AtMYB61                              <---------WRKY12 ---------->CDC5               --------->TOE2(3)                                   --------->TOE2(3)  ===============         --------->ANAC58      --------->ARR14(2)                 --------->YAB1      <-----------RAV1(2)         --------->ANAC58--------->ANAC58                   <---------AGP1   <---------MYB59        -         --------->ANAC46--------->ANAC58              <----------DOF2     ------->TEIL <---------ZAT2 ----------ID1 --------->TOE1(3)                       --------------------->WRI1   --------->TOE2(3) ---->DOF2    ----------->RAV1(2)          --------->MYB52(1) ------>ZmHOX2a(2)------>MYB46(1)      -   agaagacgaagacgaaacctgaaaccaaagccaaattctctcgattaacagaaattcctttggatctatcgtcaatggacctaatacctcagcagctcaa  722000                                       --------->ZAT2                                       <---------At4g35610                                    <------ZmHOX2a(2)                                    ========================HOX2a_HOX2a                          <---------SPL7                          <-----------HVH21                         <---------ANAC58                         <---------ANAC58                        --------->DEAR3(2)                       --------->SPL7  <---------ZAT2                  <---------LBD16  <---------ARR11(3)                  --------->SPL7   --------->ARR14(2)                <-----------HVH21  <---------ARR14(2)               --------->ANAC46   --------->GLK1(1)            ------>ZmHOX2a(2)               <---------TGA1a<---------ANAC46                --------->GLK1(1)               --------->ANAC58   <---------GLK1(1)           <---------GLK1(1)               --------->O2  <---------LBD16                 --------->ARR14(2)               --------->ANAC58--------->LBD16               <---------AGP1               --------->TGA1a--------->LBD16                <---------ARR14(2)             <---------ALFIN1<---------HSFB2a(2)             <---------ARR11(3)  <---------MYB52(1)  <---------ARR14(2)                <---------ANAC46 <---------RAP2.6(3)  --------->ARR14(2)   ----------->HVH21 --------->ARR11(3)                 ----- --------->At5g28300 <---------MYB52(1)--------->At4g35610  <---------CCA1(2)                   <---- ========================MYC_MYB ----------->ARR10      ----------->RAV1(2)                   <------ -------->RAP2.6(2)  <---------SPL7--------->ARR11(3)------>ZmHOX2a(1)                    <---------DEAR3(1) ---------->GT1<---------O2  --------->HSFB2a(2)     =================HOX2a_HOX2a--------->ATHB12 <--   ggccgtaactcttacacacgtccggtaccgtcccggagatcagctcggacatttcctcgcctggatctctctcgtcccagtcttcattagcctcggtgga  722100                          <---------At4g35610                          --------->At4g35610                     <---------ANAC46                     ==================bZIP_DOF                     <---------ANAC58                     --------->O2                     <---------O2                     <---------ANAC58                     <---------TGA1a                     --------->TGA1a  ------>ZmHOX2a(2)       ------>ZmHOX2a(2)                   ------>NtERF2     <------ZmHOX2a(2)       <---------bZIP60(1)                   --------->LBD16   <---------HSFB2a(1)     <---------At4g35610             ==================bZIP_DOF                      --------->bZIP60(1)             <---------DAG2         --------->ARR14(2)       --------->At4g35610           ----------------->AG     <---------ARR11(3)      <---------ARR11(3) <---------CCA1(2)<---------LBD16   --------->ARR14(3)  --------->ANAC55(2) ---->ARR14(2)    <---------RAP2.6(2)--------->HSFB2a(1)<---------ANAC55(2) -----ARR14(2)   <---------LBD16    --------->ARR11(3)  --------->O2 ---MYB46(3) <----------DOF2<----------DOF2             <---------O2 -----TEIL ----------------->AGL1   <---------ARR14(2)  <---------ANAC46              --------->YAB1   ttcgtctctcatttccttttccggcgtgagcttcaagggatcttcttcggtataggtctcgtgatctcacaattcatcaacgagtttatcaaaacatctg  722200                                    <---------ANAC58                                    <---------ANAC58                                   --------->ZAT2                                   <---------HSFC1(2)                              <---------HSFB2a(2)                              --------->HSFB2a(2)                    --------->ANAC58                       ------->TEIL--------->HSFC1(2)                --------->ANAC46               ----------->HVH21   <---------ZAT2                    --------->ANAC58           -----              --------->LBD16<---------ANAC58                 --------->ANAC58               <-------             --------->LBD16 <---------ANAC46                 --------->ANAC46               --------         <-----------HVH21   <---------ANAC58                 --------->ANAC58               <-------         <---------PCF2<-------TEIL--------->HSFB2a(1)      ---------->DOF2         <<<<<<<<<TBF1   tagagcaagcgcgtcccgagacatgtacgttgctcgaagcttgcgattcacatggatggccatcaagccactcgcaattcatgttcttcttcgctacgta  722300                                     <------MYB83                                     <------MYB46(1)                                    --------->MYB59                                       <---------- -->TEIL                    --------->GLK1(2)                                       <---------MYB46(3) --ANAC55(2)               <---------ARR14(2)                 ------->TEIL        <---------At4g35610 ->ANAC55(2)               <---------GLK1(2)      --------->At4g35610 --------->ATHB12 <---------MYB46(3) --ANAC46       ---------->DOF2     <---------AtMYB61      <---------YAB1     <----------DOF2   tttcagtttgatgggatgtaaaggaattggattctggtttggtttaagaagcagatggattatgaatcttcttcattggtctttagctgttgttaccatg  722400  Previous    Next  AGI:  At5g03070.1    Description:  binding. similar to importin alpha-2 subunit, putative [Arabidopsis thaliana] (TAIR:AT1G02690.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO18121.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61727.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 718203    to: 721538    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g03080.1    Description:  phosphatidic acid phosphatase-related / PAP2-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO18122.1); contains InterPro domain Phosphatidic acid phosphatase type 2/haloperoxidase; (InterPro:IPR000326) Range:  from: 721866    to: 723399    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version