Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                      --------->At4g35610                       <----                                                      <---------At4g35610                      <-----                                                <---------ARR14(2)                             ------                                                --------->ARR14(2)     --------->ZAT6         <------                                                ------->TEIL      --------->TOE2(3)       <---------DAG2     --------->TOE2(3)                     <----------DOF2     <----------DOF2            <----------DOF2   actataacattaagtcacatcaatatacaaaaaaaaaaacttcacctttgaatctgggctgaatgctttcttaacacttgaaaaccatttagcttttttc  712400                                                                                         <---------HSFB2a(2)                                                                                         --------->HSFB2a(2)                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                       --------->GLK1(1)                                                                                      --------->AGP1                                                                                      <---------ARR14(2)                                                                                      --------->ARR11(3)                                                                                      --------->ARR14(2) <---------CCA1(2)                                                                    <---------AGP1 --------ALFIN1                             --------->ANAC58                    <---------YAB1 -------GT1                                 --------->ANAC58                    --------->ANAC46 ------GT1     ------>ZmHOX2a(1)   <---------ICU4               ------>ZmHOX2a(2)     <---------ARR11(3) ---->ID1      <-----------HVH21  --------->AHL20(2)  --------->ARR14(2)      <-----------GT1 -----GT1     --------->TOE1(3)   <---------ATHB51    ------->TEIL     --------->At4g35610          <   cccatctctatgtaatccttcacagagaagaaacaaattattccacaaggaaactgaatctactgatctcagtagctaaattacgacagatctcgaaatc  712500                                                                                  --------->ANAC46                                                                              <---------WOX13(1)                                                                           <---------YAB1                                                                          ------>ZmHOX2a(2)                                                                         --------->CCA1(2)                                                                         <------ZmHOX2a(2)                                                                        <---------AGP1                                                                        --------->AGP1                                                                        <---------ARR14(2)                                                                        --------->ARR14(2)                                                                        --------->ARR11(3)                                                     --------->YAB1     <---------ARR11(3)                                                 --------->TOE2(2)     <---------CCA1(2)                                                 --------->TOE1(2)--------->bZIP60(1)  --------->DAG2          <-----------GT1                      ------->TEIL       <---------bZIP60(1) ---------->DOF2 ---------ZAT6                            ------->TEIL         ----------->HVH21  <----------ID1   tagagctaaaattcaccaattgatactgaatcagggagagaatgaatcgtacctatgagaagacagtgacaccagatctgatagacgaaaaagcttgaag  712600                                                                                                 <---                                                                                                 ----                                                                                             ------>ZmHOX2a(2)                                                                                           <---------ARR11(3)                --------->At4g35610                                                        --------->ARR14(2)              --------->ZAT18   <------NtERF2                                              <---------ARR14(2)              <---------WRKY12<---------RAP2.6(2)                                          <---------AGP1              <---------WRKY38(1)<---------ANAC46                  --------->DAG2          --------->ARR11(3)          <------ZmHOX2a(1)  <---------LBD16    <---------DAG2    ---------->DOF2         <---------CCA1(2)    <---------LBD16       ---------->DOF2      ----------------->AGL1                --------->ATHB12   ----------->RAV1(2) --------->AtMYB61     <---------ZAT18  <----------ID1 --------->GLK1(2)<------   ataaaacctggaggagtcaactaaaccacaacgcggcttctaagtagtgaccttatcggagaagacgaaaaagcttaagaatcgaatcgattggatcttt  712700                                                <---------ICU4                                                --------->ATHB51     <-------TEIL                               --------->ATHB12    --------->ALFIN1                           --------->ICU4  <---------ANAC58                             <---------YAB1  <---------ANAC58                           --------->YAB1                                         < <---------AtMYB61    <<<<<<<<<TBF1         <---------YAB1                                      <---- ------At4g35610<----------DOF2   <----------DOF2                                      *TSS     ----- ----->At4g35610<---------DAG2   <---------ANAC58                                   --------->At4g35610 ----DOF2  <---------ARR11(3)    <---------ANAC58                          <------ZmHOX2a(1) --------   gctgaggtgcgaagataacttttcttcttcgaattgctttcacattatcataattgcaaatggagaagagagagagaggagaagacagatggattcaaag  712800                                                                              <----------------------                                                                        <---------ALFIN1                                                                       <------NtERF2                                                                     --------->PCF2                                                                     <---------TCP15(1)                                                                     <---------TCP20                                                                    --------->TCP11(2)                                                                    --------->TCP16(1)                                                                    --------->TCP15(1)                                                                    <---------PCF2                                                                    --------->PCF5                          <---------ANAC46                          --------->TCP20                        --------->ALFIN1          <------------CBF <---------TCP16(2)                        <---------ANAC46         --------->ATHB12  ----------->TCP11(1)                     <---------DEAR3(1)  <---------bZIP60(1)       <---------TCP15(2)      <--------- ---------ANAC46  ----------->TGA1       --------->bZIP60(1)       <---------TCP23         ---------- -----ZAT2        ----------->HVH21 <---------ANAC46              <---------ZAT18         <---------- ---->ZAT2   --------->ARR14(2)     <---------ANAC58           <-----------RAV1(1)   <----------DOF2< -->DOF2     <---------ARR14(2)     <---------ANAC58        <----------DOF2  <-----------GT1  <------   ctgtgtgaagaagagtatttgtgacggtgtgtgtttgtgcgtgatgccacttaattgggcctcttttgtgggccccattctactcttctttttttccttt  712900 --ANAC81             ---------->ID1 --GT1                <---------CCA1(2) >ID1           ------>MYB46(1) -GT1           ------>MYB83     --------->ZAT6 <----------DOF2 <<<<<<<<TBF1 <---------MYB59  <-----------GT1  <---------DAG2                       --------->YAB1 ----DOF2  <-----------GT1  <----------DOF2  <-----------GT1 <---------ZAT6         <-------TEIL   --   tcttcttcttaatttaccaacttcgtctctcttttactctattcttttcactttttttttttagtgatgagttttatttcttaagtttcataaacactgt  713000                                                   <-------TEIL                                                   <---------ZAT18                                                <---------ANAC58                                           <---------AHL20(2)                     <---------ZAT14      <---------YAB1                     --------->ZAT14    --------->YAB1           --------------->AGL15        <---------ICU4           <---------------AGL15       <---------YAB1           <----------DOF2          --------->AHL20(2)         ---------->ID1   --------->ARR11(3)    <---------ANAC58        <-----------GT1   <---------ARR11(3)    <------MYB46(1)                   ----------->GT1 --------->GT1<---------YAB1 <----------DOF2    <------MYB83 --------->YAB1 ----------->HVH21   tttgttaatttttctttttatagtatagtatctttagatttattattatttggtgcatttcaaaaatagtatacatagttgacatggtatattggtgttt  713100                                    <---------ANAC55(2)               <----------DOF2                                    <---------ANAC55(1)            ------->TEIL                                    <---------ANAC58              ---------->ID1          <---------AHL20(2)                                    <---------ANAC46              <-----------GT1        --------->AHL20(2)                                    <---------ANAC58           <---------------AtSPL8    <---------AHL20(1)                                   <-----------------------TaNAC69(2)<---------DAG2 <---------ARR11(3)                       --------->AHL20(2)<---------ZAT14       <---------------AtSPL3    <---------AHL20(2)                    --------->TOE2(3)  --------->REM1(2)       --------------->AtSPL8    --------->AHL20(1)   tctctaaaaatgtttgaaattttcttaaaatatggataacgtgtaaactggaaaatgtattggattttgtaccttttttgaaactagataatttaatgaa  713200                                                     ================================================                                                     <----------DOF2                                                     --------------->AGL15                                                     <---------------AGL15                                              <---------AHL20(2)                                              --------->AHL20(2)                                           --------->AHL20(2)                                           <---------AHL20(2)                                          --------->AHL20(1)                                          --------->AHL20(2)                             --------->AHL20(2)                                          <---------AHL20(2)                          ------>MYB83                                          <---------AHL20(1)         <------MYB46(1)  ------>MYB46(1)               ---------->DOF2           --------->AHL20(2)     <---------YAB1      <---------MYB59           ----------->GT1               <---------AHL20(2)  <---------MYB52(1)    --------->ANAC55(2)           ------>ZmHOX2a(2)          --------->AHL20(2)    ----------->GT1<---------AHL20(2)         --------->ARR14(2)           <---------AHL20(2)    --------->LBD16--------->AHL20(2)         <---------ARR14(2)          --------->AHL20(2)   <---------LBD16<----------DOF2 <---------AHL20(2)        <------ZmHOX2a(1)     <---------AHL20(2)     <---------DAG2  <------MYB83  --------->ANAC46  --------->CCA1(2)           --------->AHL20(2)  <-----------GT1--------->ATHB12<-----------GT1   <-   caagttatgaggatcgataaaacagtgaccatataaattttaaattaatttataactttatccggtaagattggtctttaatttcacctaataaaacaaa  713300  Previous    Next  AGI:  At5g03040.1    Description:  IQD2 (IQ-domain 2); calmodulin binding. similar to IQD1 (IQ-DOMAIN 1), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G09710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18115.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 710100    to: 712787    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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