Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------ANAC46                <---------ANAC46                <------MYB46(1)                <------MYB83                <---------ANAC58                <---------ANAC58               <---------AtMYB61             --------->CCA1(2)             --------->ARR14(1)            --------->ARR11(3)            --------->ARR14(2)            <---------ARR11(3)                           --------->LBD16            --------->ARR11(1)                          --------->ANAC55(2)          ----------->ARR10<---------TOE2(3)            --------->ANAC58     --------->At4g35610   --------->DAG2               --------->ANAC46                          <--     <---------At4g35610   --------->MYB59              <---------ANAC55(2)                       --- -------YAB1<---------ARR14(2)                          --------->ANAC58<---------ANAC58         <--- ->MYB59<------ZmHOX2a(1)  <---------TOE1(3) <------ZmHOX2a(1)       <-----------GT1     <-------GAMYB ->MYB46(2)<---------HSFB2a(1)      <------ZmHOX2a(1)  <---------LBD16  <---------ANAC58<---------MYB46(3)   atgattcagaggaagatttggtgtggaataaggtaagaggacttgaaggactactgccccgtaattcatattttccttgctatcttgtttcggttgcaaa  704200                              <------NtERF2                                                     -----                          <---------ANAC58                                                    <------                          <------MYB46(1)                                                     <------                          <---------ANAC58                                                  <--------                          <------MYB83                                                      <------MYB83                         --------->MYB46(2)                                              --------->CCA1(2)                         <---------AtMYB61                                            ----------->ARR10                         --------->MYB111(2)                                <------MYB83--------->ARR14(2)                         --------->MYB55(2)    <---------At5g28300          <------MYB46(1) <------MYB46(1)        <------ZmHOX2a(1)<---------MYB46(3)   <---------WRKY18(1)           ----------->GT1 <-------- <---------WRKY18(1)     --------->MYB111(1)  <-----------GT1              --------->MYB59  <-------- -------ICU4           <---------MYB52(1)    --------->WRKY12            <------ZmHOX2a(1) <---------AtMYB61 ------>YAB1      ------------>AtMYB77       ----------->HVH21         <---------TOE2(3)<---------ARR14(2) ------ATHB12    ----------->HVH21        <---------MYB46(3) --------->ATHB12    --------->MYB52(1) -   tcatgaccgaggaagaagagtgacagtttggtggcagtcgatggtgtttgaccgtctaggtctcgattggactaaggaaggtaaaacggagatttggtgt  704300    --------->GLK1(1)    <---------GLK1(1)   <---------ARR11(3)   --------->ARR11(3) ---->ALFIN1                                            ---------->DOF2 ---ANAC58                     --------->ARR11(3)      <---------WRKY12 ---ANAC58                     <---------ARR11(3)      <---------WRKY38(1) -ANAC58               <---------ARR14(2)  <-------TEIL<---------WRKY45 -ANAC58               --------->ARR14(2)<---------ARR14(2)             <---------ICU4            <-- -ANAC46           <---------LBD16       --------->ARR14(2) ---------->DOF2  <---------ANAC46     --- ----->NtERF2   --------->CCA1(2) <----------DOF2     --------->WRKY18(1) ----------->HVH21 ------>ZmHOX2a(1)   gccgagatatcgttggagagacgcggttttggagagctttggggattcgtcgaatggtcaaagaaagtgtttacttatgacggatgtgattctccttcag  704400                                                                                                <----                                                                                         <-----------                                                                  <-----------GT1       --------->ATHB12                                                                 <---------YAB1         <--------ATHB1                                                      --------->HSFC1(1)                <---------ICU4                                                      <---------HSFB2a(2)               -------->ATHB1                                                      --------->HSFB2a(2)               --------->ATHB51              --------->LBD16        <---------ARR14(2)        <---------ICU4          <---------ATHB51      <-----------GT1                --------->ARR14(2)  <<<<<<<ZML2                   --------->ICU4  --------------------->WRI1  --------->ATHB12  --------->HSFB2a(1)                    <---------YAB1  <----------DOF2         --------->ATHB12      <---------HSFB2a(1) <---------YAB1     <---------ATHB12 -------GLK1(1)         <---------ANAC46<---------MYB46(3)    --------->AHL20(2)   ------------>CBF ------>GLK1(1) <----------DOF2     <------ZmHOX2a(1) <---------HSFC1(1)    <----------DOF2     <----   atttctttttgcattccgctattgtgacttattgattaggatttgttggaatgtttctagaacatttattactattgactttgatttcaattattgaact  704500                     <---------ANAC58               <--------HAHB4               --------->ATHB12               <---------ICU4                                      --------->ARR11(3)               --------->YAB1                                      <---------AHL20(1)              <---------ATHB12                               --------->YAB1      <---------ANAC58                                       --------->TOE2(3)                      <  <----------DOF2    <---------ANAC58           <------------CBF   <---------AHL20(2)      --------->AHL20(2) ------DOF2 --------->WOX13(1)                  <---------GLK1(2)  --------->AHL20(1)    ----------->GT1 -CBF <---------ANAC58<----------DOF2     --------->ANAC46  ----------->GT1              --------->ANAC58 -----DAG2------------>CBF            <----------DOF2 <----------DOF2             *TSS   --------->ANAC58   ttttcttttcgtatcaatcatttgctttcatttgtagtttctttacacaagattgtctttgaatgttaatattttgtagtggctacaaaacaagtaaatc  704600                                         <---------AHL20(2)                                      ----------->GT1                                            ----                               --------->TOE1(3)                    ---------->DOF2    ---------->DOF2                               --------->TOE2(3)               ---------->DOF2 ----------->HVH21 <--- ---------ATHB12XXXXXXXXXXXXXXXXXXXXX>MIR402           <---------ZAT6        <---------ANAC55(2) <---   taatcaatagaggcccatttaaggcccattaaaccttgaatattaaaaattgattcagagttagaaaaagaaaagaaacacatgacccctaaatcgagag  704700                                    --------->HSFB2a(2)                               <------MYB46(1)                               <---------MYB46(3)                        ---------->DOF2             <------ZmHOX2a(1) <------MYB83                <---------ANAC58     <---------WRKY12       <------ZmHOX2a(1)      <---------AtMYB61            <---------ANAC58   <-----------HVH21     <   <---------MYB52(1)        <--------P                    <---------ANAC46  <---------ANAC58    ---- ----->HSFC1(2)            --------->ALFIN1               <-----------------------TaNAC69(2)   ------ ------HSFB2a(1)     --------->At4g35610        ------>ZmHOX2a(2)    --------->LBD16      <---------GLK1(2) ------HSFC1(2)   --------->At4g35610       --------->ETT(2) <------NtERF2   <---------ANAC58  <-----   gcttcgttaggagaaggagaagcagaagagtgttggttctcgattgtcgatctcaacaatggcgtagtctccccaaaatgcgtcaacctcgagcttctcc  704800             <------ZmHOX2a(1)           <---------TOE1(3)           <---------TOE2(3)     <---------TOE2(2)  <---------ANAC46            --------->ATHB12 ------>NtERF2          --------->ATHB12                                                  --------->AtMYB61 --------->LBD16        <---------ICU4                                              ---------->DOF2 ---------ANAC46       <---------YAB1 <-------GAMYB                               ------>ZmHOX2a(2) < -->ZmHOX2a(1)  <------MYB83 <---------YAB1         --------->YAB1              --------->ARR11(3)  < ----->RAV1(2)  <------MYB46(1)      <---------MYB46(3)       <---------O2      <---------ARR11(3) <- ----At4g35610 <---------AtMYB61<---------WOX13(1)  <---------GLK1(2)         <---------YAB1       <-   tgccgcgtatgttaaggatggtctgatcattgtgattggaggttgcaggtccaagaatatcgagacttggggagagatttatgatctaaagaccaatact  704900      --------->ARR14(2)     ----------->RAV1(1)      <---------ARR14(2)   ------>ZmHOX2a(2)  <------NtERF2          <---------ARR11(3) ------>NtERF2       --------->ANAC55(2)                 <----------DOF2 ---------RAP2.3(3)  <---------ANAC55(2)       <---------ANAC58   ------>MYB46(1)         --------->REM1(2) ---------DEAR3(1) --------->YAB1              <---------ANAC58   ------>MYB83    <---------ANAC58 --------ANAC58   <---------ATHB12         <---------ANAC58     <---------MYB59   <---------ANAC58 --------ANAC58 --------->WOX13(1)         <---------ANAC58  <-----------GT1     --------->ATHB12<---   tgggggcgaatactgctccaatcacatgatcccacagttcaaaatgcttacttgaatcgctttaaacctaacttgcagacgaatgcttgctatgtagaga  705000              <---------ANAC46                                                     <---------AHL20(2)         <---------ANAC58                                                      <---------ZAT6         <---------bZIP60(2)                                                   ----------->GT1         <---------ANAC46                                --------->ANAC58    <---------ANAC46         <---------ANAC58                      <---------ANAC58            <---------ZAT14        <------NtERF2                          <---------ANAC46            --------->ZAT14       <-----------HVH21            --------->ANAC58     --------->ANAC58 <---------REM1(1)   -------      --------->ALFIN1<---------AHL20(2)       <---------ANAC58           --------->ALFIN1  <-------- ------WOX13(1)   <---------RVE1(1) --------->ANAC58   ---------->DOF2  <---------ANAC46    ---------   ttgacaaggtgtcgtgcctgatatttttatccgatgggaagctattttggcgtgaaacaaagcaaggttttgagaggtgtagtgttatattgggagatga  705100  Previous    Next  AGI:  At5g03000.1    Description:  kelch repeat-containing F-box family protein. Identical to Putative F-box/Kelch-repeat protein At5g03000 [Arabidopsis Thaliana] (GB:Q9LYY5); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT3G46050.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 703266    to: 704435    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g03010.1    Description:  kelch repeat-containing protein. similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT5G03020.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 704582    to: 705536    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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