Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------ZAT14                    --------->AtLEC2                    --------->ANAC58                    --------->ANAC58   <<<<<<<<<WRKY18             ----------->GT1               ----                 <-----------------------TaNAC69(2)              --------->ZAT14                 ----           ---------->DOF2      --------->ZAT14                  <---------ZAT14                -----     --------->MYB52(1)       --------->ANAC46          --------->ALFIN1      ----------->GT1  ------ --->YAB1 <------ZmHOX2a(1)   --------->bZIP60(2)   <-----------RAV1(2) ---------->DOF2   -----------   caacaattaacaggaaagagacatgcaataacacatcactgtcaaaatactaacacaggtgttacagagtagtcaaaagctagtgaaatggaaggaaaaa  637100    =================================================================================================    <---------------AGL15                                                                      ======  --------->ICU4                                                                               ------  <---------ATHB12                                                                             <----- ----->ANAC58                                                                           <---------ICU4 ----->ANAC58            --------->TOE1(3)                         ---------->DOF2----------->GT1---- ---->DAG2               --------->TOE2(3)--------->MYB52(1)<------ZmHOX2a(1)     <------ZmHOX2a(1) ---->DOF2     ----------->GT1 --------->YAB1         ----------->HVH21          ----------->GT1 ---- >GT1        ---------->DOF2  <---------ATHB12 <---------YAB1   --------->YAB1---------->DOF2 -------   agcaatctttaaacagaaagtcaaaaaccctaatcagcattagcaaacgatgatggctcacaggaatcagaaagttttagcaaaggataaaaatttccat  637200                                                            --------------->AGL15                                                           ----------->RAV1(2)                                            ================================MADS_MADS                                  <----------ID1           ----------------->AGL1 ==========MADS_MADS         <---------YAB1 --------------->AGL15 ===========================================================MADS_MADS --------->AGL15            <---------AHL20(2)             <---------ANAC55(2) ----------AGL15            --------->AHL20(2)           <-----------GT1           --------->At4g35610 ----->AHL20(2)            --------->YAB1   <---------------AGL15                --------->YAB1 ----->ATHB51         --------->LBD16      ----------------->AGL2             --------->WOX13(1) -->TOE2(3) ----------->GT1--------->AHL20(2)  ---------->DOF2          --------->ANAC46     ------>ZmHOX2a(1)   aatttagtaagagaaggttaaacccagaattaaaattggacaaagactataaagagaaattacctgaagtagacacagaacaatcagaagacttcctgtc  637300                                                               --------->ANAC46                                                               -------->P                                                            ------>ZmHOX2a(2)                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                      <---------ANAC55(2)                                                      --------->ANAC55(2)                                                      --------->ANAC58                                                      --------->ANAC58                                                      --------->ANAC46                   <<<<<<<<<TBF1                                                     <---------LBD16                ------>ZmHOX2a(2)                                                --------->LBD16------>MYB83        <------ZmHOX2a(2)                                               --------->HSFB2a(2)                --------->ARR14(2)                                               <---------HSFB2a(2)                <---------ARR14(2)                 ------>ZmHOX2a(1)            <---------LBD16  ------>MYB46(1)    <---------ARR11(3)             <---------MYB52(1)    <---------ALFIN1--------->ZAT14                --------->ARR11(3)             --------->ARR14(2) ------>ZmHOX2a(1)  <---------ZAT14       <---------GLK1(2)  <<<<<<<<<TBF1         <---------At5g28300    ===================================HOX2a_HOX2a    --------->ARR14(3)        <---------WRKY38(1)     ==================================HOX2a_HOX2a     <---------ARR14(3)      <-----------HVH21---------->ID1     <---------GLK1(1)<------ZmHOX2a(2)   <---------TOE1(2)    <   gagtttgtggtcaccgttcctccttgtcttattcctcccactcgatttcccagaacacgggatccaacccattaagcttctcacgatcttcttcttcttc  637400                                                                                            ---------                                                                                            ---------                                                                   <----------DOF2     --------->ANAC58                                                                <---------ARR11(3)     --------->ANAC58                                  ---------->DOF2               --------->ARR11(3)     --------->ANAC46             <---------YAB1   ------>ZmHOX2a(2)              --------->HSFB2a(2)      --------->ZAT18  <---------GLK1(2)         --------->ARR11(3)          <---------HSFC1(2)        --------->DAG2 -------->HAHB4             <---------ARR11(3)          --------->HSFC1(2)       ---------->DOF2  <-- ---------ATHB12      <---------------------WRI1       --------->GLK1(2)  ----------->GT1   ---------   aaatgattcttcgtttcgattgtgttcgatgatctcaaaagcgagagagagagagagaagcttagagaactttgaaatgtaaaaaaagcacgccaagcca  637500                                                     --------->AHL20(2)                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                               ------------>CBF                                       <---------AHL20(2)                                    --------->ARR11(3)                                    <---------AHL20(2)                                    <---------ARR11(3)  <---------TOE1(2)                 <---------AHL20(1) *TSS                               --------->AHL20(2) >ANAC58              <----------DOF2<---------AHL20(2) >ANAC46          ---------->ID1    --------->AHL20(1)                    <---------TOE2(3) -------ATHB12   <-----------GT1   --------->AHL20(2)<---------AHL20(2) <---------AHL20(2)          - >ANAC58 <-----------GT1       --------->AHL20(2)   <---------AHL20(1) --------->AHL20(2)  <---------   atcgctggatttttcgatttttctcttttgatataaaatatatttttaaaacaatttaatttttgtgatacaaattaatgtgaatgggtttgactttgac  637600                                                                     -------->P                                                 --------->YAB1    --------->MYB46(3)                                                <---------YAB1     <---------MYB46(2)                                             <---------AHL20(2)    <---------MYB111(2)       --------->AHL20(2)               <---------AHL20(1)         <---------MYB52(2)               -       --------->AHL20(1)               <---------AHL20(2)         <---------MYB111(1)              -       <---------AHL20(2)               --------->AHL20(1)      ------->GAMYB                       -   --------->ICU4                      --------->YAB1          <------------MYB.PH3(2)             -- --------->YAB1---------->DOF2      --------->YAB1---------->DOF2--------->MYB52(1)        <--------- -------->AHL20(2)     ---------->DOF2 <---------AHL20(2)      <---------MYB52(2)  --------->AHL20(2) -DOF2--------->AHL20(2) <----------ID1--------->AHL20(2)      <---------MYB46(2)  <---------AHL20(2)   aaataaaaattaattgtcaaagaaaaaaagacaaacaaaaattatattttatcaaagtagtatcaactaactacccccatggaatttaaatttcttttca  637700                                <---------ANAC58                                <---------ANAC58                                --------->MYB46(3)                                <---------ANAC46                                <---------MYB52(2)                              --------->ARR11(3)                              ----------->RAV1(1)                          --------->AHL20(2)                               --------->ANAC58                          <---------AHL20(2)                               --------->ANAC58     ---------->DOF2      <---------AHL20(1)                               --------->ANAC46 -------->ANAC46          --------->AHL20(1)     <-----------GT1       --------->YAB1 -------->ANAC58         --------->AHL20(2)   <---------REM1(1)     <----------DOF2 --------->YAB1 -------->ANAC58  --------->ATHB12            ----------->GT1       <---------------AGL15       ----- ----->GAMYB     <---------AHL20(2) <-----------RAV1(1)             --------->TOE2(3)          <----- -DOF2--------->DAG2<---------WOX13(1) <---------REM1(1)            --------------->AGL15   <--------   acacacaaaaagagattatttgattgaataaatttcttgtgttgtaagttgtaacaatattgaaattgaactttaataagcaacaatcgtggtcaccatt  637800                                                                                           <---------TOE2(3)                                                                                          <----------                                                                                  --------->AHL20(2)                                           <---------AHL20(2)                    --------->ARR11(3)         --------->YAB1                  <---------AHL20(2)                      <---------ARR11(3)         <---------ICU4              ------>ZmHOX2a(1)             <---------RVE1(1)  <---------AHL20(2)         --------->ATHB12       --------->KAN4(2)                 --------->ARR11(3) --------->AHL20(1)        <---------ATHB12       <---------ICU4                     <---------GLK1(2)  <---------AHL20(1) ---->YAB1     <---------ANAC46<---------KAN4(1)          ---------->DOF2        <---------AHL20(1) - ----YAB1<--------HAHB4       <---------YAB1            <---------YAB1      <---------TOE2(3)  ------ -YAB1--------->WOX13(1)  <---------WOX13(1)      <---------ANAC46<---------ARR11(3)<---------AHL20(2)   atagtttccaatcatttgggtataagagattgattattcctattttaaaatggtgtttatcaaagacagattttttctaagaatatatatatttacgata  637900                                                       <---------ATERF1(1)                                                    <---------AtLEC2                                              --------->SPL7        --------->ANAC58                                            <---------ZAT14     --------->ANAC58                                            --------->ZAT14     --------->ANAC58                                            <---------SPL7    ---------->DOF2                        --------->ICU4   ----------------------->TaNAC69(2)        --------->ARR11(3)           --------->ANAC46 --------->ANAC58        <---------ARR11(3)           --------->ANAC58 --------->ANAC58 -GT1  --------->YAB1  <---------TOE2(3) ------>NtERF2--------->ANAC46            --------->AHL20(2) -------->At4g35610 --------->ARR11(3)  <---------ALFIN1  ------>NtERF2         --------->AHL20(2) --->CCA1(2)  ---------->DOF2        --------->ANAC58------->TEIL   --------->ANAC58   taagctaaatgatattgaaagagataatgttgatacaatacgacaccgtactatgcacggctccaaaagcaagcttataccaaaaaatatacagagaagg  638000  Previous    Next  AGI:  At5g02800.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G18610.1); similar to protein serine/threonine kinase BNK1 [Brassica napus] (GB:AAG16628.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 635226    to: 637501    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g02810.1    Description:  PRR7 (PSEUDO-RESPONSE REGULATOR 7); transcription regulator. Identical to Two-component response regulator-like APRR7 (APRR7) [Arabidopsis Thaliana] (GB:Q93WK5;GB:Q9LZ04); similar to APRR3 (PSEUDO-RESPONSE REGULATOR 3), transcription regulator [Arabidopsis thaliana] (TAIR:AT5G60100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21763.1); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain CheY-like (InterPro:IPR011006); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 637895    to: 641975    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version