Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->MYB46(3)                                     --------->ANAC58                                     --------->ANAC46                               <---------MYB52(2)                            <-----------GT1 ->ANAC58               <---------ICU4   --------->ANAC58             <---------ARR11(3) ->ANAC58               ---------->DOF2  --------->ANAC58             --------->ARR11(3)          --- >DOF2           ----------->GT1     --------->ANAC58       --------->DOF5.7(2) --------->ZAT6 ------   aaaaactcatttacaagatgagttaataaagacactaacacacaaccaatgtgaaaacagacgtttacatgagatattgttacctctaagaagtcattaa  624900                         <---------TOE1(2)                   <---------ANAC58                   <---------ANAC58                                               <---------ICU4           <---------HSFB2a(1)                                                 <---------ICU4           --------->KAN4(1)                                                   --------->YAB1           <---------KAN4(1)                                                  <---------ATHB12           --------->HSFC1(2)                                                 --------->ICU4           --------->HSFB2a(1)         <---------YAB1                         <---------ATHB51           <---------HSFC1(2)         <---------ARR11(3)                 --------->ANAC58      --------->YAB1    ------>ZmHOX2a(1)             ---------->DOF2    --------->ANAC58  <---------AHL20(2)   --------->TOE2(3)    <-----------GT1              --------->ANAC46 ------>YAB1--------->KAN4(2)         <---------GLK1(2)                <-----------GT1      --------- --->YAB1 <---------KAN4(2)     <-----------GT1--------->TOE2(3)   <----------DOF2<-----------GT1<---   tcatataatgagaacattcttgcttcctaagtttttacaagattattaacctctaagaaaggagagacacttttaacgcaataataactacatgatgtta  625000                                                                          --------->GLK1(2)                                                                <---------ZAT14     --------->ARR11(3)                                                             ----------->GT1        --------->ARR14(2)                         ----------->HVH21                  --------->ZAT6<---------ARR14(2)                      --------->GLK1(2)             <---------YAB1       <---------GLK1(2)      <------ZmHOX2a(1)  <---------YAB1           <---------ICU4--------->ZAT14     <---------ARR11(3) -->GT1          ---------->DOF2                  --------->YAB1---------->DOF2     <---------ARR14(2) ------YAB1----------->GT1                      --------->GLK1(2)     <------ZmHOX2a(1)   <----------DOF2   taaatataggagagagtagaaaagaatatgacagccctactaagacagagaatcatcatcgaacagtaaagaggagaatctctgaatatccactttaaac  625100                                                                 ---------->ID1                                                           <---------DAG2                                                         ============================================                                                         <---------------AGL15                                                         --------------->AGL15                                                        <-----------------AGL2                                         <---------MYB52(1)<----------DOF2                              --------->AHL20(2)        ----------------->AGL2 <---------ZAT18             --------->AHL20(2)         <-----------------AGL1 <----------DOF2      - --------->ZAT18--------->ZAT6<---------AHL20(2)      <---------ALFIN1<----------DOF2 <---------ALFIN1   tactgccctcttgtcttaactctcagaaccatttaatttttcagttattttgacccataccctttttggcctctttccctgctttccaacaccttcacac  625200                        <---------AHL20(2)                      --------->AHL20(2)                      <---------AHL20(2)                      ----------->TBP                --------->YAB1                         <--------                     ================================================================================                     <-----------------AGL3         *TSS                                   --------->ICU4             <---------LBD16           ------>ZmHOX2a(1)<---------ICU4                     <---------YAB1            <---------ALFIN1          --------->TOE2(3)--------->ICU4                    --------->YAB1   <---------STY1(1)----------->TBP   --------->TOE1(3)<---------YAB1<---------ALFIN1    <--------HAHB4 ======================================MADS_MADS ------->TEIL     ------->GAMYB          <---------ICU4 -------->ZAT6--------->ANAC46 --------->PCF5   <---------CCA1(2)--------->MYB46(3)     <---------YAB1   ttactctagggcttccacggctatatatatatggtcccttccttaaacttgtatctcataattcacaaccagcactgctactactagtttatcattattc  625300                   <---------ARR11(3)                                     <-------GAMYB                   --------->ARR11(3)                                    ----------->GT1          --------------->AGL15                               --------->TOE2(2)     <---------AHL20(2)                                       --------->TOE1(2)    <---------AHL20(1)                                       ----------->RAV1(2)    --------->AHL20(1)                         <---------HSFB2a(2)       <---------MYB46(3)         -    <---------AHL20(2)                         --------->HSFB2a(2) ---------->DOF2                  <    --------->AHL20(2)                  --------->ARR11(3)  --------->MYB52(1)                     <- -ICU4    <---------------AGL15       <---------YAB1     --------->ANAC55(2)       <-----------RAV1(1) =========================MADS_MADS <-----------GT1      <---------ANAC55(2)  <-----------GT1    ----   catcaatttattctatatagagttcttctctgtttatattacgatattgctcgaagattacatacctgagaaagatggttaaaccctgttggagaatagg  625400                                                            <------ZmHOX2a(2)                                                           <---------ARR14(3)                                                           <---------ARR14(2)                                                           --------->ARR14(2)                                    <-------TEIL           <---------ARR11(3)                                   <--------P              --------->ARR14(3)                                <---------TOE2(3)          --------->ARR11(3)                           ----------->RAV1(1)             <---------AGP1  <---------MYB52(1)  --------->WOX13(1)                   <-----------ARR10 <---------RAP2.6(3)  --------->KAN4(2)                  ----------->ARR10  <----------DOF2 -------->ATERF1(2) <------ZmHOX2a(2)             ----------->GT1    <---------REM1(2)             -- ---------ATERF1(2)--------->ARR11(3)       ----------->HVH21------>ZmHOX2a(2)                    <-- -----NtERF2       <---------ARR11(3)   <---------MYB46(3) --------->AGP1  <---------DAG2         --- ----->ALFIN1----------->GT1  ---------->DOF2    <---------------AtSPL8 <---------ALFIN1  <---------AtLEC2   tgccggtatggagagaagtaagatcaatcccacaaaggttgatggtttgacatggtacaaagatcttggtcttcacacctttggagagttttccatggca  625500         ----------->RAV1(1)         <------ZmHOX2a(2)         --------->MYB52(1)         --------->AGP1     --------->ANAC46               <---------ARR14(2)                       --------->ANAC58     --------->ANAC58               --------->ARR14(2)              ----------->RAV1(1)     --------->ANAC58     <------ZmHOX2a(2)                        <---------ETT(1)  =============================HOX2a_HOX2a        --------->At4g35610        --------->ANAC58  ------>ZmHOX2a(2)      --------->ARR14(2)       <---------At4g35610        --------->ANAC46 ------->YAB1            <---------ARR14(2)       <------NtERF2    ----------->HVH21  <-----------RAV1(1) -------ATHB12          ====================HOX2a_HOX2a       --------->MYB46(3) <-------TEIL     <-- ------>ICU4            <------ZmHOX2a(1)       <---------RAP2.6(2)--------->ANAC46   <---------MYB46(3)   atgatccaagccaacagtgtgatggaggatcagtgccagatcgaatcagggccgcttacattcaacaatccgacagttcaaggcacatttgttggagttt  625600                               --------->ATHB12                              <-------TEIL                            <---------GLK1(2)                            <---------ARR14(2)                         --------->HSFB2a(2)                         <---------HSFB2a(2)                    --------->HSFC1(2)                                           <---------AHL20(2)                    <---------HSFB2a(1)                   ---------->DOF2   <----------DOF2                    <---------HSFC1(2)             --------->LBD16          <---------DAG2          -                    --------->HSFB2a(1)     --------->ARR11(3)            ------>MYB46(1)           -               <-----------RAV1(2)          <-----------ARR10             ------>MYB83  --------->TOE2(3)               <---------HSFB2a(2)          <---------ARR11(3)          --------->DREB2C(2)         <               --------->HSFB2a(2) --------->ZAT14<---------HSFB2a(2)   --------->DEAR3(1)   <------- -------YAB1  <-------TEIL  --------->ARR14(2)    --------->HSFB2a(2)  --------->DEAR3(2)<----------DOF2   acgatggccatggaggtccagaggcttccagattcattgcagacaacatcttccccaagttaaagagtaagacaccgactttttttatttcctttattgt  625700                                                        <------MYB46(1)                                                        <------MYB83                                                       --------->MYB111(1)            --------->ANAC58                          --------->ALFIN1           --------->ZAT18                            <--------P        --------->ANAC58                        <---------TOE1(1)        --------->ANAC58                        <---------TOE2(1)        --------->AtLEC2                       --------->SPL7 <---------At4g35610                         <---------SPL7             <---------At4g35610 ------>TEIL--------->ANAC58                 <-----------HVH21          --------->At4g35610 -------->ARR14(2)                          <---------ANAC58  --------->GLK1(1)   ---------->DOF2 ---------ARR14(2)--------->ZAT6            <---------ANAC58  <---------GLK1(1) --------->At4g35610 --YAB1--------->ANAC46                     <---------RAP2.6(2)       <-----------RAV1(2)     ------>NtERF2   tgaatctgccaggcacactaacactggtctcacatgaacagagtttgcgtccgagggtagggagatttcagagcaggtgatcagcaaagcatttgccgag  625800  Previous    Next  AGI:  At5g02760.1    Description:  protein phosphatase 2C family protein / PP2C family protein. similar to protein phosphatase 2C family protein / PP2C family protein [Arabidopsis thaliana] (TAIR:AT3G12620.2); similar to protein phosphatase 2C family protein / PP2C family protein [Arabidopsis thaliana] (TAIR:AT3G12620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18066.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 625252    to: 627122    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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