Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ICU4                            <---------YAB1                  <---------ANAC58                            --------->ICU4                  <---------ANAC58                          --------->YAB1                    <---------ANAC46                       --------->bZIP60(2)             <---------MYB46(3)                           -                  --------->ANAC58                 --------->DAG2                            <-------                  --------->ANAC46                ---------->DOF2                     ----------->GT1 -AHL20(2)        --------->ANAC58             <---------AHL20(2)<-----------GT1   --------->GLK1(2)<   caattactcacatcaaactcaagacacatcataattctattcttgatatataaaaagttgttgcttgtaacaagatagatgcgaaattcggtttattaca  547200           <-----------GT1     <---------AHL20(2)                                        <---------YAB1    <---------AHL20(2)                                       <---------AHL20(2)    --------->AHL20(2)                                       --------->ATHB51 ----------->GT1                        <-----------GT1      <---------ICU4              <----------DOF2 --------->ATHB12                       --------->MYB52(1)   --------->AHL20(2)       ------->TEIL -------->ICU4<---------DAG2      ---------->DOF2       <---------MYB52(1)       --------->CCA1(2) ----GT1<---------ICU4     ---------->DOF2             --------->TOE2(3)       --------->YAB1<------- ---------YAB1<----------DOF2<----------ID1 ----------->GT1 --------->ICU4   <---------WOX13(1)   agatgattaaatattactttttttttttgaaaagacaaaagttaaccggtttatttcccttaattatttttggcatttgaatgatatgaagctttttatt  547300                                              --------->ATHB12                                              <---------AHL20(2)   <-----------GT1                                             <---------AHL20(1) --------->ANAC55(1)                                     <---------ICU4            <-------MYC3                         --------->MYB52(1)  --------->AHL20(1)------->MYC3                     --------->LBD16 --------->YAB1       --------->ANAC58               --------->AHL20(2)                    <---------ANAC55(2)      <---------AHL20(2)<-------MYC4       ---------->DOF2                   <---------LBD16  --------->ICU4        --------->ANAC58--------->ANAC58              <---------AHL20(2) <---------AHL20(2) <--------P <-------MYC2    --------->ANAC58          <---------AHL20(2)     --------->AHL20(2) <---------WOX13(1)    --------->ANAC58    -------          --------->AHL20(2)----------->GT1  --------->AHL20(2)------->MYC2    --------->ANAC58------ --AHL20(2)   --------->AHL20(2) <---------YAB1   <---------MYB46(3) --------->ZAT6   --------->YAB1   ttgtttatctaattaaaaaattccgcaaaccggttttaattatcaaatttattggttgataagcacatgtaacaccacgataagcaaagcataaaatcgt  547400                                                                                             --------                                              --------->YAB1                            <-----------RAV1(2)                                            --------->AHL20(2)                         ==============                             --------->HSFB2a(2)       ----------->GT1                 <------ZmHOX2a(2)      ---------->DOF2        <---------HSFB2a(2)   --------->ZAT6                     <---------ARR14(2) -->YAB1            <---------AHL20(2)      <---------AHL20(2)                        --------->ARR14(2) --->TOE1(2)        --------->AHL20(2)     --------->YAB1                        --------->ALFIN1   aagagagaaaaagaaacattgtttaatttgtctagatggaacctataaaaataagactagttaataagagatagagagagagagtggggatcaggtggta  547500                                                   ------>MYB83                                                --------->HSFB2a(1)                                                --------->HSFC1(2)                                                <---------HSFC1(2)                                               <-----------ARR10                                               ------->TEIL                                            --------->ANAC58                                            --------->MYB46(3)                                   ----                                            <---------MYB52(2)                                  <----                                        --------->ANAC58                                       ------                                        <---------MYB52(2)                                     <-----                           <----------DOF2  --------->ANAC58                                 --------                       ---------->ID1   --------->MYB46(3)   ------------>CBF              ------>ZmHOX2a(1)                   <----------DOF2      --------->ANAC58     *TSS<---------ATHB12         <---------ALFIN1 --->GT1    ------>ZmHOX2a(1)      --------->ANAC46------>MYB46(1)                   --------->AtMYB61 ==================HOX2a_HOX2a  --------->ANAC46<---------HSFB2a(1)               <---------ALFIN1   tctagttcaggctccttctctctttttctctttcactcagccacgaacgaaccttccccttaatccaatcttcttcttacataaacacctctcctccccc  547600       ---------->DOF2     --------->HSFB2a(2)     <---------HSFB2a(2)    ----------------->AG      --------->ZAT6    ----------------->AGL1<---------MYB52(2)                                         <---------ZAT6 -->NtERF2              --------->ZAT6                                             ----------->GT1 -----ALFIN1       <----------DOF2                                                 <---------ANAC46 --->MYB46(3)    <---------HSFC1(2)                                       --------->YAB1            < ----MYB55(2)    --------->HSFC1(2)                 >>>>>>>>>TBF1        <---------YAB1    --------->ALFIN1 ->ANAC46       --------->GLK1(2)            <----------DOF2   --------->ATHB12  <---------ZAT14  <--   accgtttccaaaagagagaagctttctcactaacaccaaaaacaagtctttgaagaagaataaaaagattggattttgataagtttagtgaaaatggggg  547700                                 <-------TEIL                         <-----------HVH21                         <-----------TGA1                        --------->ANAC58                        --------->ANAC46                        --------->ANAC58                <---------RVE1(1)                        --------->bZIP60(2)            <---------ARR11(3)                        --------->ANAC55(1)            --------->ARR11(3)                    --------->ARR14(2)    <---------ANAC58                                         --                    --------->TCP20  <-----------RAV1(1)<---------CCA1(1)           <-------TEIL   <-           <---------ZAT14   <---------YAB1           ----------->GT1              <-----------ARR10           --------->ZAT14----------->HVH21          --------->DAG2                --------->ARR14(2) ----------DOF2     <---------ARR14(2)    <---------ANAC58    <---------LBD16      <---------ARR14(2) -------At4g35610   <---------PCF2--------->ATHB12 ---------->DOF2     <---------At4g35610     ------   agcttttgtgttcttcactgtggaacccgtcacgattcattgttgcttctctcaaaaggtattttctgggtttagcttcttagaggttcttcgttcttaa  547800                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   --                                               <---------RVE1(1)                                  ---             <---------TOE2(3)                <---------GLK1(2)                                  <---             --------->MYB59                  --------->ARR11(3)        <---------LBD16     ---------    <---------MYB52(1)                --------->DAG2               --------->ARR11(3)       <-------- ------->ARR11(3)        <----------DOF2    ----------->ARR10      <---------ARR11(3)       --------- --------ARR11(3)  <---------YAB1    ---------->DOF2              <---------CCA1(2)         <-------- ---->DOF2   <---------TOE1(3) ----------->GT1<---------ARR11(3) ------->TEIL             <------NtERF2   aggtctgtttttttttaggttgtgatactttgaatgtaaaaaagggaagatttttagtttcgatatgtatatctctcggatgggtttgagtcggagtttc  547900         <---------LBD16    <----------DOF2    <---------DAG2  ------>NtERF2 --------->RAP2.3(2) --------->DEAR3(1)            <---------ZAT6 -------->DEAR4(2)            <---------TOE1(3) ------NtERF2            --------->GLK1(2) -------->RAP2.3(1) --------->LBD16 ------->LBD16     --------->HSFB2a(2) ---->NtERF2       <---------HSFB2a(2)     --------->ARR11(3) ------>ANAC46    <---------ANAC46       <------MYB46(1)                        <---------ARR11(3) ------LBD16      <---------LBD16        <------MYB83                           --------->ARR11(3) >HSFC1(2)       <---------LBD16       <--------P                        <---------DAG2 -HSFB2a(1)    <---------GLK1(1)      <-------GAMYB                   <---------ALFIN1         <----- >HSFB2a(1)    --------->GLK1(1)    <---------TOE2(3)               ------>NtERF2--------->RVE1(1) -HSFC1(2)    <---------ARR14(2)    <---------TOE1(3)  ------>ZmHOX2a(1) <----------DOF2   <---------   ccgccgctttttgggggatttcgggaaattctagggttagggttggatattgtcttcctctagcagtctctgccacttttaaaatctcttcatctttctt  548000                                                                                                    <                                                              --------->YAB1                        <                                                              <---------ICU4                        -                                                             <---------ATHB12        <------ZmHOX2a(2)                                                        ------>ZmHOX2a(2)           <---------ARR14(3)                                                      <---------ARR14(2)            --------->ARR14(2)                                                      <---------AGP1                --------->AGP1  -                                                      <---------ARR11(3)            <---------AGP1  -                                                   --------->HSFB2a(2)              <---------ARR11(3)                                                <---------ARR14(2)                  --------->ARR14(3)                                                --------->GLK1(2)                   --------->ARR11(3)                                               <---------ARR14(2)                   <---------ARR14(2)                                               <---------GLK1(2)                   --------->GLK1(1)-                                               --------->ARR14(2)                  <---------GLK1(1)<                                     --------->LBD16  --------->ARR14(2)          ----------->ARR10--                                    --------->LBD16<---------HSFB2a(2)     --------->ATHB12--------->ARR14(2)                                    ===========================HOX2a_HOX2a --------->MYB52(2)      <-     ---------->DOF2               <---------LBD16<---------LBD16  <-----------RAV1(1)     <---------ARR14(2) -----DOF2        <---------AHL20(2)------>ZmHOX2a(1) --------->ARR11(3)<-------GAMYB--------->CCA1(2) -DOF2           <---------AHL20(2)--------->TOE1(2) <---------CCA1(2) ----------->GT1------>ZmHOX2a(2)   tgagagtgaaagaggtttttttatttgtttgtgtcttcctgggaatcgagattctggatcttaatcaatatgtgggttaattgggagatctgggatttgg  548100  Previous    Next  AGI:  At5g02480.1    Description:  similar to SLT1 (SODIUM- AND LITHIUM-TOLERANT 1) [Arabidopsis thaliana] (TAIR:AT2G37570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15631.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 547561    to: 549910    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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