Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->MYB55(2)            <--------P                                <---------MYB46(3)         <---------MYB46(3)            <---------WOX13(1)                       <--------P     <---------ANAC46                 <-------GAMYB                           <------MYB46(1)     <---------ANAC58                 <---------ANAC58                        <---------MYB46(3)     <---------ANAC58                 <---------ANAC58              --------->MYB55(2)     <---------DEAR3(1)              <------MYB83                   <---------MYB46(3)    <---------LBD16                  <------MYB46(1)  --------->LBD16     --------->ATHB12 <-------GAMYB                       <---------MYB46(3)            <---------AtMYB61 -----------RAV1(1)                  --------->MYB55(2)          ------->GAMYB<------MYB83 --GAMYB--------->ALFIN1 <------ZmHOX2a(1)<---------TOE2(3)   --------->MYB52(1)<---------WOX13(1) -----RAV1(1)      <------MYB46(1)   --------->MYB52(2)   <---------ARR14(2)<---------WOX13(1) ---MYB46(3)       <------MYB83  <-----------RAV1(1)<---------LBD16--------->ALFIN1 -->MYB52(2)      --------->ALFIN1  <---------AtMYB61--------->LBD16--------->MYB52(2) -->MYB55(2)      <---------AtMYB61<---------MYB52(1)<---------ANAC46<-------GAMYB              <---- -MYB52(1)  --------->ALFIN1  --------->GLK1(2)    <---------At5g28300   <---------YAB1 ---------->DOF2   tgctgttgcggtgggaggggatggtgaggaagaaactgttggttgatgttatttcccgtgaatccaacggtggttgtgattggttgatgctaaagagagg  540700                                                                                    --------->ARR14(2)                                                                                    <---------KAN4(2)                                                                                    <---------ARR14(2)                                                                            <---------AHL20(2)    -------->HAHB4                                                         <---------AHL20(2)    --------->ATHB12                                                    <---------AHL20(2)   --------->ICU4                                                      --------->AHL20(2)          --   <---------YAB1      --------->DAG2                       ---------->DOF2--------->AHL20(2)      --   <---------ATHB12   ---------->DOF2           <---------YAB1  ---------->DOF2<---------YAB1      -- --ZmHOX2a(1)  ----------->RAV1(1)   ----------->GT1---------->DOF2    <---------AHL20(2)         ---   aagaaatgattcaaaaacaacacaaaaagtttttagaatatgtgaaaattttgataaagaaggaaagaaagaattaattttatgagtatattcaaattca  540800     --------->CCA1(2)                                   <---------ANAC58     --------->GLK1(1)                                 <-----------GT1    <---------ARR11(3)                             <----------DOF2    --------->ARR11(3)                             ------>ZmHOX2a(1)    --------->ARR14(2)                          <---------YAB1    <---------ARR14(2)                         <-----------GT1                                      < ----->GAMYB--------->ICU4     <----------ID1<---------YAB1                                         - ------->AtMYB61           ---------->DOF2<---------AHL20(2)       <---------AHL20(2)             <-- --------->RAV1(1)    <----------ID1      <---------YAB1 <---------ANAC58   <----------DOF2  <<<<<<<< ------>MYB46(3)  ---------->DOF2     --------->YAB1  <------------------------ANAC81    <-----------GT1   accacagatatacaaagattaaaagtgacaaaaggaacaagaatattattatccttttttcttgtttgtttaatctctctttatgtttttttttcttctt  540900                                                       --------------->AGL15                                                      ----------------->AGL2                                                      ----------------->AGL3                                                    --------->ANAC58                                                  ---------->DOF2                                   <                                        ---------->DOF2<---------------AGL15                        < <---------AHL20(2)          <---------YAB1     --------->MYB46(3)                   --------->YAB1 < ---------AHL20(2)         --------->AHL20(2) ----------->RAV1(1)          --------->ARR11(3)  <----- -------->AHL20(2)         --------->YAB1 --------->ANAC58        ---------->DOF2   <------ZmHOX2a(2) --------DOF2          --------->AHL20(2) --------->ANAC58    <---------ZAT6  --------->GLK1(2)<----- <TBF1              --------->YAB1  ---------->DOF2 --------->ANAC58     ----------->GT1  ------->TEIL   ctttaaattggttcttgagtactcataaattataaaaccaaagaaagccaacaaaagccatttagagtaaaagaagagataatcggatcatgaacttact  541000                                                                           <---------ARR11(3)                                                                         <---------YAB1                                                             <----------DOF2 --------->ARR11(3)                                                            ------>ZmHOX2a(2)<---------ARR11(3)                                                          <---------ARR11(3)<---------GLK1(1) -----------RAV1(1)                                    xxxxxxxxxxxxxxxx>smallRNA(i) ---------MYB46(3)                       ----------->GT1  --------->ARR11(3)--------->GLK1(1) ---------REM1(1)        <------ZmHOX2a(1)     <-----------GT1      <----------DOF2 ----ANAC58        --------->YAB1 =================================HOX2a_HOX2a                     <- ----ANAC58   <---------YAB1      <------ZmHOX2a(1)   <----------DOF2  --------->YAB1  <----------DOF2   tgttgttgccagtttgatgaatgatcaggataagtaggaaatgaagaaaaaaccatctttgatctttcttctttgatgatatcttctctctttagttttc  541100                                                                                         --------->MYB52(1)                                                                                        ---------->DOF2                            <---------At4g35610                                   --------->YAB1                         ---------->DOF2                                     ------------>CBF                    <------ZmHOX2a(1)                                        <---------------------WRI1                --------->MYB52(1)                                          --------->TOE2(3)    ----          *TSS  ---------->DOF2              <---------REM1(1)    ----------->GT1 --------->AHL20(2)< --------MYB52(1) <---------TOE2(3)<---------AHL20(2)            --------->ALFIN1----------->TBP <---   tgtttttttttgagcaaataaaggatttaaagctgattttttttttggtgaaggcttatatgaagaagtggagaattacatcaataaaaacaaagggaag  541200                                                                           <----------DOF2                                                                          --------->TOE2(3)            ---------->DOF2                                            <---------ARR14(2)           <------ZmHOX2a(1)  <---------At4g35610                <---------TOE2(3)                 <- ----->ARR11(3)               --------->At4g35610          <---------TOE2(3)              <-------TEIL ----------DOF2        --------->At4g35610 --------->CCA1(2)   ---------->DOF2       --------->AHL20(2) ------ARR11(3)      <------ZmHOX2a(1)---------->DOF2    ---------->DOF2------->TEIL <---------AHL20(2)   agctttagagagaggaaagaagaggagatgagagcttagcgaaagatagagagagaaggcaaaggtaaaggaagaacctttattcatttatatacatacc  541300                                                        <---------AHL20(2)                     <---------AHL20(2)             <---------AHL20(2)                     --------->AHL20(2)             --------->YAB1                   --------->AHL20(2)               --------->AHL20(2)                           <---                   <---------AHL20(2)            <---------ICU4                                <-----                 <---------AHL20(2)              --------->YAB1                     --------->ALFIN1                 --------->AHL20(2)             <---------AHL20(2)                <---------ANAC58               --------->AHL20(2)          --------->YAB1                         <---------ANAC58             --------->AHL20(2)           <---------YAB1--------->AHL20(2)        <---------ANAC46    <---------ARR14(2)                   --------->ARR11(3)               --------->YAB1 <---------ZAT14    --------->ARR14(2)          <---------YAB1  --------->AHL20(2)   <---------AHL20(2)  --------->ZAT18 --------ALFIN1<---------AHL20(2)        <---------ARR11(3)          --------->AHL20(2)  --------->ETT(2)   cacacatatacacatatatatatatatatagaatatgtttgaatatcatattaattatatatatagatgaataaaataagaattgagtgtgtccacagtg  541400                                                                       <---------ANAC58                                    <---------ARR14(2)          <------ZmHOX2a(1)                                    --------->ARR14(2)        <---------ANAC46       <---------ANAC58   <---------ANAC58             <-------TEIL               --------->ALFIN1          <---------ANAC58   <---------ANAC58    <---------AHL20(1)<---------ANAC58<------MYB46(1)         <---------MYB52(1) ------YAB1            --------->AHL20(1)<---------ANAC58<------MYB83  <---------ANAC58 ----ZAT6  <----------DOF2 --------->AHL20(2)           <---------AtMYB61--------->ALFIN1   ttattgcgaggctctttttgttttatatattatatacatatttgcttagggttttgggaaggtggaggagagtgagtgtgtccgattgcttaacccataa  541500                <----------DOF2              <---------------AGL15                                                        --------->DAG2              --------------->AGL15                                       --------->HSFB2a(2)             <-----------------AGL1                               --------->ANAC46        ---------->DOF2        <---------GLK1(2)                                      --------->ARR14(2)  ---------->DOF2      <---------YAB1<---------HSFB2a(2)<---------ZAT14         <---------ARR14(2) --------->AHL20(2)  <----------DOF2   --------->HSFB2a(2)--------->ZAT14  --------->AHL20(2)<---------HSFB2a(2)   gtttctttctgattctctctttctggcaatactgctacttctgtactatgtgtgcaaattatacatatacacagttttagaaaataaaagaaaaaagcac  541600  Previous    Next  AGI:  At5g02460.1    Description:  Dof-type zinc finger domain-containing protein. Identical to Dof zinc finger protein DOF5.1 (DOF5.1) [Arabidopsis Thaliana] (GB:Q9LZ56); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G37590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15635.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 539247    to: 541110    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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