Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------TOE2(3)                             -------->HAHB4                             <--------ATHB1                             --------->ATHB51                             <---------ICU4                             --------->YAB1                            <---------AHL20(2)                             --------->ATHB12                          --------->YAB1                         <---------YAB1                                --------->AHL20(2)          ----------->RAV1(1)<--------HAHB4                      --------->ANAC55(2) ---------TOE2(3)      --------->YAB1                            --------->YAB1                    -- ---AHL20(2)<---------ALFIN1<---------ATHB51               --------->AHL20(2)                <------- --AHL20(1) --------->ANAC58<---------YAB1             <---------AHL20(2)---------->DOF2     -------- --ARR11(3) --------->ANAC58--------->AHL20(2)--------->YAB1     --------->ANAC46        --------->AHL20(2) ->AHL20(1) --------->ANAC46--------->ICU4<---------AHL20(2)    <-------TEIL             <---------AHL20(2) -CCA1(2) <---------ALFIN1--------->YAB1 --------->AHL20(2)<---------AHL20(2)  <----------DOF2<------   ttgagattagacccacaccaagtatttataataattagggatttttaatagtagtttttatttatatacataataaaaaggcttttgttaattttttaaa  526200                   --------->YAB1                --------->YAB1        <-----------GT1      <----------DOF2                    <---------AHL20(2) --------->GT1 <---------AHL20(2)        --------->AHL20(2) --AHL20(2)<---------DAG2              <----------DOF2                             <---------AHL20(2) ->AHL20(2)<----------DOF2   <-----------GT1   ----------->GT1                    --------->YAB1 ---AHL20(2)  --------->AHL20(2)       --------->TOE2(3)        --------->GLK1(1)<---------YAB1 <----   ttggtaaactttactttttaataaaaacttataactatatactttaattttgttaattgtgttcagatttcatatactacattataaaaatgttttctct  526300                                                                            --------->CCA1(2)                                                                           --------->ARR11(3)                                                                           <---------ARR11(3)                                                                       <---------ANAC46                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                      <------NtERF2                                                                    --------->ALFIN1                                                                   -------->ABF1                                                                   ------->MYC2                                                                   <-------MYC3                                                                   <-------MYC4                                                                   ------->MYC4                                                                   ------->PIF5                                                                   <-------PIF5                                                                   ------->MYC3                                                                  <---------ANAC55(2)                                                                  >>>>>>>>>>ABI5                                                                  --------->O2                                                                  <---------bZIP60(2)                                                                  >>>>>>>>>>AtMYC2                                                  <---------ZAT18 --------->ANAC55(2)                                               <------MYB83       >>>>>>>>>>HY5                                               <------MYB46(1)    ===========================MYC_MYB                                              --------->MYB59     ===================================   <------------CBF                   <---------WOX13(1)          <---------TGA1a                 <--  --------->ATHB12                 <---------TOE2(2)              --------->TGA1a    <---------MYB52(1) <---------YAB1                 --------->ANAC46  --------->ZAT18 <---------O2      <-----------HVH21 <---------AHL20(2)             <---------ANAC55(2)<---------ALFIN1<-------MYC2 ------------>MYB.PH3(1) ------DOF2        <---------AHL20(2)<------------CBF        ----------->HVH21  <-----------GT1   ---   ttttttattggtctacttgattttttttgttaacacgtagattgatatttggtccacttggatttgacacgtggcgagatataaaccgttagataatggg  526400                                        <-----------GT1                                    <---------MYB52(1)                                 ------>ZmHOX2a(2)          --------->ZAT6        <------ZmHOX2a(2)                                       --------->ANAC58   ---------->DOF2             <---------ARR14(2)       <---------ZAT14                 ----------->GT1 =============bZIP_DOF      <------NtERF2               --------->ZAT14                 --------->ANAC58 -------GLK1(1)           <---------ANAC46      <----------DOF2               --------->YAB1 ------>GLK1(1)--------->ATHB12--------->ARR14(2)   --------->ZAT6         --------->YAB1   atatcaaaagtaacacttgattagaatggcagggatcccttgtttctctcctttccactactctccctccaaaacaaaaatcacaacaacaagaaaaaac  526500                                                                           --------------->AGL15                                                                           <---------------AGL15                                                                      <---------HSFB2a(1)                                                                 --------->HSFB2a(2)                                                                 <---------HSFB2a(2)                                                                ------>ZmHOX2a(2)                                                               --------->CCA1(2)                                                               <------ZmHOX2a(2)                    <                                                              --------->AGP1                        <                                                              --------->ARR14(2)                    <                                                   ---------->DOF2    <---------HSFC1(2)            <                                             ----------->GT1  <---------AGP1                        <                                            <---------------------WRI1--------->HSFC1(2)            -                                           <---------LBD16    <---------ARR14(2)                   --                                        <------------CBF      --------->ARR11(3)             --------                                       --------->ATHB12       <---------ARR14(3)             --------                                      --------->AHL20(2)      --------->ARR14(3)             <-------                                      <---------AHL20(2)      --------->GLK1(2)              <-------                                      --------->AHL20(1)      <---------ARR11(3)          <---------ANAC58  <---------GLK1(1)    --------->LBD16<---------YAB1        ----------->ARR10    --------->ZAT6    <-  --------->GLK1(1)   --------->LBD16--------->AHL20(2)---------->DOF2--------->HSFB2a(1) <---------ANAC58   tttgaaatccaaaaaaaaaaaaacccgagaaaatttgaattttattggggaaaaaaagaaagaagatctggaagtttctatgaacagtaatggcgaatcg  526600      <---------ARR14(2)      --------->ARR14(2)   ----------------->AGL1  <------NtERF2  --------->RAP2.3(1) <---------DEAR4(2) ------>NtERF2 <---------ATERF1(1) <---------RAP2.3(1) <---------ERF1 <---------ORA47(2) ---------RAP2.3(3) ---------DEAR3(1) ---------RAP2.3(2) ---------RAP2.6(2) ---------ANAC46                                         --------->MYB46(2) -------->ATERF1(2)                                    <--------P ------->ATERF1(1)                                    <-----------HVH21 ->GLK1(2)                                            <-------GAMYB                     <-----------GT1 ->ARR14(2)           ------>ZmHOX2a(2)           <---------ANAC46                     <XXXXXXXXXXXXX --ARR14(2)         <---------ARR14(2)            <---------DEAR3(1)             <------ZmHOX2a(2) ----ARR10----------->GT1          ----------->TGA1 <------NtERF2           ------>NtERF2 --------ABI4(1)    --------->ARR14(2)           <---------LBD16           --------->DEAR3(1)   aggcggcgaaaacgggaaattggatcggaagaagacgatgacgatgaattgggcggggttaggcgagtttgaagacgacgacgatcattttttcgatagc  526700                                                                                =====================                                                                                =====================                                                                                ------>ZmHOX2a(2)                                                                               <---------GLK1(1)                                                                               --------->GLK1(1)                                                                               <------ZmHOX2a(2)                                                                               ======================                     --------->HSFC1(2)                                        ======================                     --------->HSFB2a(1)                                      <---------ARR14(2)                     <---------HSFC1(2)                                       <---------ARR14(3)                     <---------HSFB2a(1)                                      <---------AGP1                    ------->TEIL                                              --------->ARR11(3)                    --------->SPL7                                            --------->ARR14(3)              --------->DEAR3(1)                                              --------->ARR14(2)           <---------ALFIN1                                                   <---------ARR11(3)       --------->GLK1(1)                                                      <-----------ARR10      ------->TEIL  <---------TOE1(2)                                        <---------CCA1(2)      <---------ARR14(2)                                                     <---------ARR14(1)      --------->ARR14(2)                    ----------->HVH21               --------->LBD16      <---------ARR11(1)                    ----------->TGA1              <---------LBD16      <-----------ARR10     <---------ARR14(2)                         <---------WOX13(1)     <---------ARR14(1)     --------->ARR14(2)                       <---------ICU4     <---------CCA1(2)  <---------LBD16   --------->At4g35610        --------->ATHB12   --------->YAB1 <---------SPL7          ----------->RAV1(2)       --------->ICU4                  < XXXXXXXMIR2937<-----------HVH21  --------->YAB1    >>>>>>>>>TBF1   <---------YAB1                  <   tctaatcgtatctccaccgtcgtaccttcggatttagcatcatcttctgacgaagaagaaggtgagtttgatgattgccggatctcgttttcttctaatg  526800                                                                          <-----------HVH21                                                                        ------>ZmHOX2a(2)                                                                      --------->ARR11(3)                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)                                                                      <---------ARR11(3)                                                                    <------NtERF2                                                                   ------>NtERF2                                                                 <------NtERF2                                                                 --------->ATERF1(1)                                                                 <---------LBD16                                                                <---------ATERF1(1)                                                                ------>NtERF2                                                                <---------RAP2.6(1)                                                                <---------RAP2.3(1)                                                                <---------ERF1                                                                <---------DEAR4(2)                                                                <---------RRTF1(1)                                                               <---------RAP2.3(2)                                                               --------->DEAR3(1)                                      <---------LBD16         <------NtERF2                                      <------NtERF2           --------->ATERF1(1)                                     ------>NtERF2            --------->RAP2.3(1)                                     <---------RAP2.3(1)     <---------RRTF1(1)                                  <-----------HVH21          <---------ERF1                               --------->GLK1(1)             <---------DEAR3(2)                              --------->ARR14(2)             <---------ATERF1(1)                              <---------ARR14(2)             <---------ORA47(2)                            --------->LBD16                 <---------RAP2.3(2)                           <---------ANAC46                 <---------DREB2C(2)                          --------->ATERF1(1)               <---------DEAR3(1)                      <---------ATERF1(1)                   <---------RRTF1(2)                    ----------->RAV1(2)                     <---------DEAR4(1)<---------ANAC55(2)                    =========================RAV <---------YAB1<---------DEAR3(1)              <---------At4g35610<-----------RAV1(1)        --------->ETT(1)  --------->ANAC46        ------>ZmHOX2a(1)------>NtERF2--------->ATERF1(1)   <---------At1g77200     ------>ZmHOX2a(1)------>ZmHOX2a(1)         --------->ARR11(3) --------->LBD16 <---------SPL7  <---------At4g35610--------->ETT(2)        <---------RRTF1(3)--------->ANAC55(2) ==============HOX2a_HOX2a<------NtERF2 --------->LBD16   <-----------HVH21  <---------LBD16 ===========HOX2a_HOX2a  <---------RAP2.3(1)   --------->YAB1<---------RAP2.3(1)      --------->DEAR3(1) ==============HOX2a_HOX2a<---------LBD16     <---------YAB1<---------RAP2.3(3)       <---------ANAC46 ===========HOX2a_HOX2a <---------DEAR3(1)<---------GLK1(2)--------->DDF1--------->WOX13(1) ---------ANAC58 <---------ZAT2<---------GLK1(1)<---------ARR11(3)<---------ANAC46    <---------DEAR3(1) ---------ANAC58<---------ATERF1(1) <---------DEAR3(1) <---------AtLEC2<------ZmHOX2a(2)<------NtERF2   tgtcgtcctcctctcgcgctgctcctgcgccggatatgtcgccggattatgatatttggatgtcggcgccgggatctatcacggagcgtcgtcgaaggct  526900                                                                                      <---------ANAC58                                                                                     <---------MYB46(3)                                                                                   <-----------HVH21                                                                                 <---------MYB46(3)                                                                                <---------ANAC46                                                                                <---------O2                                                                                --------->O2                                                                                --------->TGA1a                                                                                =====================                                                                                <---------TGA1a                                                                               <------NtERF2                                                                               --------->ATERF1(1)                                                                              ------>NtERF2                                                                             <---------DEAR3(1)                                                                             ----------->HVH21                                                                             --------->DEAR3(1)                                                                            --------->RAP2.3(1)                                                                            --------->ATERF1(1)                                                                           ------>NtERF2                                                                           <---------DEAR4(2)                                                                           <---------ATERF1(1)                                                                           <---------RRTF1(1)                                                                           <---------ERF1                                                                           <---------ORA47(2)                                                                          <---------RAP2.3(2)                                                                          <---------DREB2C(2)                                                                          <---------RAP2.6(2)                                                                          <---------DEAR3(1)                                                                          --------->ATERF1(2)                                                                          <---------RRTF1(2)                                                                          <---------ATERF1(2)                                                                          <---------RAP2.3(3)                                                                          <---------RRTF1(3)                                                                          <---------ANAC46                                                                       --------->ALFIN1                                                                      <-----------HVH21                                                                     <-----------RAV1(1) --------->ZAT14                                                          <-----------HVH21<---------RAP2.3(1)                                                         >>>>>>>>CAMTA3----------->HVH21 <---------ZAT14                                                         <---------ANAC55(2)<------NtERF2--------->ZAT18                                                         <---------ANAC58<---------ABI4(1)     <-----                                                         <---------ANAC58--------->ATERF1(1)<--------                                        --------->At4g35610        ----------->RAV1(2)<---------ANAC58                  ------->TEIL          <---------At4g35610       ------->TEIL<---------ATERF1(1)   tcttaatggaatgggacttgaatctaagaagactaggctcggagctatctcgattcaacgcgtgagtgaacctgtggcggcgacgggtgagtgctcaggt  527000                                                                                          <---------SPL7                                                                                        <----------DOF2                                                                                        <------------        --------->LBD16                                                                 <------------       <---------ANAC55(2)                                                             <---------ANAC58       <---------ANAC46                                                           <---------ARR14(2)       <---------HSFB2a(2)                                                        --------->ARR14(2)       --------->HSFB2a(2)      <------ZmHOX2a(2)                               <---------DEAR3(2)<--       <---------ANAC58       --------->At4g35610                              <---------DREB2C(2)---       <---------ANAC58   <-----------HVH21                                   --------->DDF1---------      <---------LBD16   ===============HOX2a_HOX2a                     --------->LBD16 <---------AtLEC2   <----------DOF2 --------->ALFIN1         --------->LBD16       <---------GLK1(1)    <------------- =============bZIP_DOF  <------ZmHOX2a(1)   ----------->GT1      --------->ARR14(2)    <---------ANAC46 ----GLK1(2)    <---------AtMYB61         <---------LBD16        <---------ARR14(2)    <---------ANAC58 ---RAV1(2)  ----------->HVH21<---------At4g35610   ---------->DOF2------>ZmHOX2a(2) <---------YAB1--   tctcgcgttgcggaagtgaaggtggaggagtcagatcacaattctccggtgaatcaaagagttcgtcgatctccgtcgatgtcggttttgcttgtacggt  527100  Previous    Next  AGI:  At5g02430.1    Description:  WD-40 repeat family protein. similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT2G37670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15640.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 526590    to: 529837    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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