Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   ---------->DOF2                    <---------ANAC58                                           <---------------AGL15                    <---------ANAC58                                           ------>ZmHOX2a(1)              --------->ARR11(3)                                              --------->TOE2(3)              <---------ARR11(3)           <---------YAB1                     --------->TOE1(3)         <---------ZAT2                    --------->ICU4                  ---------->ID1         --------->ZAT2  --------->HSFB2a(2)      <---------ZAT14       --------------->AtSPL8     -- -----------GT1 ------>ZmHOX2a(2)  ----------->RAV1(2)<---------ZAT6<---------MYB52(1)----------->GT1   ttttatcttccagcttgatcttgggtactggaataccatctggtgatgatggtatagtgttgtttacttcgttttttgttccttaaagcagaaaatagaa  511300                                                   <---------ZAT2                                                   --------->At4g35610                                           <---------YAB1                              <---------At4g35610  --------->ZAT2                   <---------ICU4         --------->AHL20(2)                   --------->YAB1         <---------AHL20(2)                  --------->ICU4        <---------YAB1        --------->AHL20(2)           --------->CCA1(2)  --------->At4g35610<------ZmHOX2a(1)         ----------->GT1      ---------->DOF2<---------YAB1 <----------DOF2<---------At4g35610  <-----------RAV1(2) --------->GT1    <---------ATHB51 --------->TOE2(3)        --------->TOE2(3)                  <-----   aatgttacaaaagataaacaattatggtcatgagcttcctttattaatataggagctgagaacattaaacagaaccagggtataaacttatctattacta  511400                              --------->AtMYB61                           ------>MYB46(1)                           ------>MYB83                         <---------MYB59                                              <------ZmHOX2a(1)                        --------->MYB46(3)           <---------ZAT18              <---------TOE1(1)                       -------->P                    --------->ZAT18         --------->ANAC58                       ------>MYB46(1)              --------->ALFIN1         --------->ANAC46                       ------>MYB83               <---------ANAC46--------------->AtSPL3         --------->ANAC58------->GAMYB      --------->ICU4        <---------------AtSPL8   ----------         --------->ANAC58--------->AtMYB61  --------->GLK1(2)     --------------->AtSPL8<---------bZIP60(2) ----------AGL15 --------->GLK1(1)       <---------TOE2(3)   <----------DOF2 --------->ANAC58      <-   aacttggcttcaagcacatatatccaaccaaaccaaaacatttgagattatgaagtgtgctatcttttgaagtactaaaacggaacgaggacatggcaaa  511500            --------->CCA1(2)           <---------SPL7           --------->TOE1(2)         <---------TOE2(3)    ------>MYB46(1)    ------>MYB83  --------->AtMYB61                                      <---------ARR14(2)  <---------MYB111(2)                                  <---------MYB46(3)  <---------MYB46(2)                               <------ZmHOX2a(1) --------->ANAC58       --------->At4g35610     <-----------RAV1(2)                                <- --------->ANAC46    --------->At4g35610        <---------LBD16    --------->MYB52(1)         <------ --------->ANAC58    <---------At4g35610      -------->P --------->ARR14(2)<----------DOF2    <------ ->GT1   <---------TOE1(3)                 <---------ANAC58    <---------HSFB2a(2)         <---------MYB52(1) ---------ID1<-------TEIL                  <---------ANAC58    --------->HSFB2a(2)  <------ZmHOX2a(1)   aacaccaaactaaggtacgagagagcagaagaatcaacaaaactgtcttaccaggagcggttcttctacaaacgggtcttttgtgaggaagtcgtttctt  511600                                                                                        --------->ANAC58                                                        <---------MYB46(3)              --------->ANAC58                                                        <------MYB83                    <---------bZIP60(1)                                                       <---------AtMYB61             ----------->HVH21                                                  <---------LBD16                <----------DOF2    --------->ANAC58                    <---------ALFIN1<------MYB46(1)     <---------MYB52(2)    --------->ANAC58  <---------TOE2(3) ----------->RAV1(1)                ----------->GT1    <------ --------REM1(1)<---------ANAC46     --------->ANAC46  --------->ALFIN1    --------->ANAC58   ------- ---ANAC58 <---------MYB46(3)        --------->PCF2--------->LBD16         --------->ANAC58   <------ ---ANAC58<---------ATHB12----------->GT1      ------->TEIL       --------->ALFIN1   ----------->TGA1   gatgtaacgccaatggttgtgtttaagaatgtcaaatagaccccacatgaatccagggtggttttggattggggagcaagtaactttgtgacgcaagttc  511700           <---------ANAC58           <---------ANAC58                      <---------DAG2           <---------ANAC46                      <----------DOF2          --------->MYB52(2)            --------->ANAC58                                  -----------      <---------MYB46(3)                --------->ANAC58                          ---------->DOF2 ---ARR11(3)                        --------->ANAC58                        --------->ANAC46       -- -->ARR11(3)    ----------->GT1     --------->ANAC58       --------->TOE2(3)--------->ANAC58       -- -----ARR10<---------ANAC55(1)      --------->ANAC46       --------->TOE1(3)--------->ANAC58---------   ttccccattggttacttgtggtaaaaaaaaaaaaactcactcaagctataactttatcaaacctgaaaaacaaaacataagccataaaacacatcaatct  511800       <---------AHL20(2)                         --------->AHL20(2)           --------->WOX13(1) ->CBF --------->AHL20(2)                         <---------AHL20(2)         <------ZmHOX2a(2) ------->ANAC58                    --------->HSFB2a(2)                 <----------DOF2<-----------GT1 ------->ANAC58                    <---------HSFB2a(2)  <-----------HVH21    ------------>CBF     <-- >WOX13(1)               --------->YAB1 --------->At4g35610     <------------CBF   <----------DOF2<--   ccagcaaaatttataacgaaaacagaataagaattttgcagaagcagaacattttaatggtcagagaattgaactttggatcaatcttttacattaccca  511900                                                                                        --------->ANAC58                                                                                        --------->ANAC58                                                  --------->YAB1                        --------->ANAC55(2)                                                  <---------ICU4                        --------->ANAC46                                                 <---------ATHB51            --------------->AtSPL3                                                 <---------ATHB12            <---------------AtSPL3     <---------TOE2(3)             <---------ARR11(3)                        <---------------AtSPL8     <---------TOE1(3)            <---------CCA1(2)                          --------------->AtSPL8 -------GLK1(2)           <-----------HVH21      --------->ICU4         --------->TOE2(3) ----------CBF       <-----------GT1 >>>>>>>>>RAP2.2           ----------->GT1   ------->TEIL   gattgtgaaggttgaagagcatgaaaccgttcacatatatctaaatttcaaataatgaagacactaagtaataacataaaacgtacttatacgcattcta  512000                                                                             --------->ANAC55(1)                                             <---------YAB1                  --------->ANAC46                                      --------->At5g28300          --------->YAB1            <---------YAB1  --------->ARR14(2)                    <---------ATHB12                 --        <---------ARR11(3)  <---------ARR14(2)                  --------->WOX13(1)    <--------------    <---------TOE2(1)  ------>ZmHOX2a(2)   --------->YAB1    --------->ANAC46--------->ANAC58      --   <-------TEIL  --------->YAB1   --------->MYB52(1)       <-----------GT1   --------->ANAC58    ----   caacgtacaaggtcatcaatggtgatcccaaatccaaaacggtaatcgtgattttggcaatttacccaatcatatatacacgaaatggacacaatttgga  512100                  <----------DOF2                 --------->TOE2(3)                 --------------->AGL15                 <---------------AGL15                ----------------->AGL1            <-------GAMYB       <---------TOE2(3)    --------->DAG2     <---------AHL20(2)   ---------->DOF2         <---------ANAC58            <---------ARR14(2) ------->ANAC58 ----------------->AG--------->ICU4<---------ANAC58            --------->ARR14(2) ---AGL1   <---------MYB46(3)----------->GT1      <---------ANAC46           <---------CCA1(2)  ----- ------->ANAC58 <-----------------AGL1        <---------GLK1(1)       <-------GAMYB         --------- ----->MYB52(1)<-----------------AGL1     <---------TOE2(3)          <---------MYB46(3) ---------->DOF2   aacggaattaatgtggttacctttgtgggaaaggtgaaatgtttatggatttgtgtggaacatcgtcttctcggttgccatatccatggcgaaagaaaga  512200  Previous    Next  AGI:  At5g02390.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G07620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15645.1); contains domain PTHR21726:SF3 (PTHR21726:SF3); contains domain PTHR21726 (PTHR21726) Range:  from: 508635    to: 511708    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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