Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 ----                                                                                        --------->LBD16                                                                                     --------->ARR14(1)                                                                                     <------ZmHOX2a(2)                                                                                     --------->CCA1(2)                                                                                    --------->ARR14(2)                                                                                    <---------GLK1(2)      --------->YAB1                                         <-------TEIL           <---------ARR14(2)    ------>MYB83                                         <---------TOE1(2)          --------->AGP1    --------->MYB52(1)                                  <---------AtLEC2           <---------At4g35610    ------>MYB46(1)    <-----------GT1            --------->ATHB12                 --------->At4g35610  <---------MYB59     <---------YAB1         --------->ARR14(2)                   ----------->ARR10-- --->ANAC58      ----------->GT1             <---------ARR11(3)                <-----------HVH21 ---- --->ANAC58     <---------TOE2(3)            --------->ARR11(3)           <-------PIF5------>ZmHOX2a(2) --->ANAC46     <---------TOE1(3)            <---------ARR14(2)           ------->PIF5<---------LBD16   caaacctaacataacattagggttattacagacttagggtttatgaagttcttcatttgcaggtacaagggttgcacttgcagtcagatccgcatttgca  506800                                                                                                  ---                                                                                          --------->ZAT14                                                                                        <------NtERF2                                                                                      <---------DREB2C(2)                                   --------->TOE1(1)                                  <---------DEAR3(1)                               --------->HSFB2a(1)                                   <---------ABI4(1)          <------NtERF2        --------->HSFC1(2)                --------->DEAR3(1)  --------->ATERF1(1)         --------->ANAC46      <---------HSFB2a(1)            <---------ALFIN1       <------NtERF2---        <---------LBD16    --------->LBD16              <------NtERF2               ------>NtERF2 ---       <---------LBD16   <---------LBD16--------------------->WRI1                 <---------DEAR3(1) <---------YAB1 ---------->DOF2<---------HSFC1(2)      --------->LBD16             --------->ALFIN1<- ----->ANAC58  ------->GAMYB<------NtERF2             --------->DEAR3(1)           ----------->HVH21 ----->ANAC46 --------->ANAC58--------->ANAC58     --------->DEAR3(1)      <---------GLK1(2)  <------ ------->YAB1 --------->ANAC58--------->ANAC58 <-------TEIL ----------->RAV1(1)    <xxxxxxxxxxxxxxxxx ----->ANAC58 <---------MYB52(2)   --------->TOE2(1) <---------LBD16 <------ZmHOX2a(1)<---------ANAC46   agcatcattctcggcaacgaaagtctcgccggaagcctcgtactgagagttcatcgccggagcaacaccgaggacaagagtctcggtggcggtgttctcc  506900                                                                       --------->YAB1                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                                    --------->ATHB51                                                                    <---------ICU4                                                             --------->YAB1          <----------DOF2                                   --------->ICU4         <---------DAG2                             ----------->GT1 <--------HAHB4           <------- ------>ANAC46                                     ----------->GT1  --------->YAB1          --------- ------>ANAC58                                <------ZmHOX2a(2)    --------->ICU4           <-------- ------>ANAC58                               <---------ARR11(3)    --------->AHL20(2)--------->CCA1(2) ----------HVH21                             --------->ARR11(3)<---------YAB1       <---------ARR11(3) ---HSFB2a(2)                       --------->AHL20(2)    --------->YAB1            --------->ARR11(1) xxxsmallRNA(le3)       ---------->DOF2  ---------->DOF2  <---------ICU4        ---------->DOF2  ----   aagtcagggtaccttttgcaactgtacaaagccccaaaaaaaataaagatcatgggttaaaaatgatgaataattaaaaccagaaagatttgattaaaat  507000                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                               ------                                                                                            ------->TEIL                                                                                            ---------    <---------YAB1                                                                          ---------   <---------AHL20(2)                                                                       <--------   --------->AHL20(2)                                                            --------->HSFB2a(2)  --------->YAB1                                                      <---------ICU4     <---------ANAC55(2) <---------YAB1               <---------YAB1         ----------->RAV1(1)<---------YAB1  <------------ --YAB1                <---------TOE1(3)       --------->ANAC46       --------->YAB1 --------->CCA1(2) >AHL20(2)             <---------TOE2(3)       --------->ANAC58      --------->ICU4 --------->ARR14(2) -AHL20(2)    <---------HSFB2a(2)              --------->ANAC58 --------->YAB1   <---------HSFB2a(2) ------->GT1  --------->HSFB2a(2)          --------->YAB1     --------->GLK1(2)<------ZmHOX2a(2) <---   tgtattataatctcatcgagaaattagggtttttgattcagaaaatcacaagaaacaccagaagaatcagaattatgagagatcgagaaacgcgtaccct  507100                                      <---------ZAT2                                      <---------At4g35610                                      --------->At4g35610                                  <---------ALFIN1                         --------->AGP1                         <---------ARR14(2)                                         --------->CCA1(2)    <---------ICU4       --------->ARR14(2)                                         <------ZmHOX2a(2)    --------->ATHB12     --------->ARR11(3)                                        --------->ARR11(3)   <---------ATHB12      <---------ARR11(3)                                        <---------AGP1   --------->MYB46(3)   --------->GLK1(1)                                          <---------ARR11(3) ------->LBD16          <---------At4g35610   --------->AtMYB61                    --------->AGP1 ------>ANAC58     <---------ATERF1(2)--------->ZAT2                               <---------ARR14(2) ------>ANAC58 ------->PIF5       --------->AtMYB61                                --------->ARR14(2) ------>ANAC46 <-------PIF5       ------->GAMYB                                   --------->GLK1(1) --->ANAC46------>NtERF2--------->At4g35610   <---------ALFIN1     <---------HSFB2a(2) >ARR14(2) <---------ZAT18<------ZmHOX2a(2)   ----------->RAV1(1)  <---------HSFC1(1)        <------- >SPL7     --------->LBD16--------->CCA1(2)  --------->ANAC46      --------->HSFC1(1)------>ZmHOX2a(2) -ARR14(2)--------->RAP2.6(2)    --------->MYB46(3)  --------->ANAC58             <---------GLK1(1) -----------TaNAC69(2) ----------->ARR10     --------->MYB46(3)    --------->HSFB2a(2)       -------- ------LBD16<---------ALFIN1  --------->MYB46(3)     --------->ANAC58            ----------->ARR10   ccgcaaccattgccgcacttgcaggcagatccacaaccacagcttccaccacagcaagacatgttttttctagaaaattggaagagatctgagaagattt  507200                  --------->TOE2(3)        --------->YAB1                                         --------->YAB1        ------>ZmHOX2a(2)     <---------YAB1                <----------DOF2                        <-      <---------ARR11(3)    --------->YAB1              <------ZmHOX2a(1)        --------->YAB1   <--      --------->ARR11(3) --------->TOE2(3)           <---------LBD16 <---------AHL20(2)          <--- --ARR11(3)       --------->TOE1(3)       *TSS --------->ANAC55(2) <-----------TBP         --------->ETT(2) ->ARR11(3)      ----------------->AGL1  ------->TEIL<-----------RAV1(2) --------->ANAC46  <---------ETT(2)   atgaagatgatcttaatttgccttaaacgataatcagtgaatgaaacttacatattcaggagctttgatatttataggcaaaattagaatttgtagaccg  507300            <------ZmHOX2a(2)           --------->ARR11(3)           <---------ARR11(3)          ------->GAMYB       <---------DOF5.7(2)      <---------WRKY12    <-----------HVH21  <-------MYC2  ------->MYC3  ------->MYC2  <-------PIF5  ------->MYC4  <-------MYC4  ------->PIF5  <-------MYC3 ========================bZIP_DOF <---------TGA1a                                                                                   -- =================MYC_MYB                                                                          -- --------->TGA1a                                         --------->AHL20(2)                        <- <---------O2      <---------ZAT18                      <---------AHL20(2)                      ----- --------->ANAC55(2)                                --------->AHL20(2)           --------------->AGL15 --------->ANAC46  --------->ZAT18                --------->ANAC58         <----------DOF2      <---- --------->O2------>ZmHOX2a(2)                 ------>ZmHOX2a(1)    <---------At5g28300 ----------->GT1 --------ALFIN1    --------->ZAT14   <---------AHL20(2) --------->AHL20(2) <---------DAG2       ----- -------WRKY12<----------DOF2   --------->TOE2(3) --------->ANAC58 <-----------GT1 <---------ATHB12<- -------------PIF3(2)          <---------ANAC55(2)----------->GT1 <---------ZAT14<---------------AGL15   tccacgtgtcaacgatctttgtccactcttatcacctaaataatcgttcctcaagtaaataattttagtttacagcccttttccaataaacagaaaaata  507400             <---------ZAT6       <------ZmHOX2a(1)     <---------TOE2(3) ------->ARR11(3)                                          ---------->DOF2 ------->AHL20(1)                                    --------->ANAC58 --------AHL20(1)                                    --------->ANAC46               <-----------GT1 ---->AHL20(2)                                 --------->CCA1(2)           --------->YAB1 -----AHL20(2)                   <-----------GT1     --------->ANAC58     <---------YAB1  <----------DOF2 ---->AHL20(1)               <----------DOF2  --------->ARR11(3)         <---------ARR11(3) --------AHL20(2)       ---------->DOF2       <---------ARR11(3)----------->GT1   <----------DOF2   aaatattgaggattagagttggaaacaaaagctttttacatgtataaagatttacaagaaaaaaagaagtaacaaaatcatagactttacttctttataa  507500                                                                            <-----------GT1                                                                        <---------AHL20(2)                                                                   --------->AHL20(2)                                                                 --------->TOE2(3)                  <---------AHL20(2)                            --------->YAB1       <-----------GT1                  --------->AHL20(2)                        --------->AHL20(2)    --------->AHL20(1)              --------->ICU4          ----------->GT1      --------->AHL20(2)     <---------ARR11(3)         ----------->GT1            ---------->DOF2  <-----------GT1   <---------AHL20(2)       ---------->DOF2       ---------->DOF2 <-----------GT1<---------AHL20(2)    <---------AHL20(1) <------ZmHOX2a(1)<---------ICU4 ----------->GT1    ----------->HVH21  --------->AHL20(2)   ctaggagagcaaagtaacaattaatacaaataaaagtgtaaagtatatttccatttgacaatttaaacataaattttttttcaatattttctatgttcta  507600                                                                             <---------ARR14(2)                                                                <---------ANAC55(2)                                                                <---------ANAC58                                                                <---------ANAC46                   <-                                          --------->TOE1(3)     --------->ANAC55(2)            <-----                                          --------->TOE2(3)     <---------ANAC58     --------->ANAC55(2)                                 ----------->GT1     <---------DAG2          --------->ARR14(2)<-----                                 <----------ID1      <----------DOF2   <-----------GT1         <-----                              ---------->DOF2     <-----------GT1    --------->ICU4  <---------ANAC55(2)                   ---------->DOF2       ----------->GT1        ----------->GT1 ----------->HVH21  --   acatgttaacatgttagcgaataaagcttatcgaaaggaaaaatcgttaaattcactttttcagtttcgtaattttcagtatatgacacataattttgct  507700  Previous    Next  AGI:  At5g02370.1    Description:  kinesin motor protein-related. similar to microtubule motor [Arabidopsis thaliana] (TAIR:AT5G23910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15647.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Helix-hairpin-helix DNA-binding, class 1; (InterPro:IPR003583) Range:  from: 503406    to: 507242    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g02380.1    Description:  MT2B (METALLOTHIONEIN 2B). Identical to Metallothionein-like protein 2B (MT2B) [Arabidopsis Thaliana] (GB:Q38805); similar to MT2A (METALLOTHIONEIN 2A) [Arabidopsis thaliana] (TAIR:AT3G09390.1); similar to Metallothionein-like protein type 2, MT2-4/MT2-25 (GB:P56168); similar to metallothionein-like protein type 2 [Pringlea antiscorbutica] (GB:AAP94016.1); contains InterPro domain Plant metallothionein, family 15; (InterPro:IPR000347) Range:  from: 506496    to: 507242    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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