Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <------NtERF2                                              ------>NtERF2                                             <---------ALFIN1                                             --------->DEAR3(1)            --------->WRKY18(1)                                          --------->ANAC58                <-----------HVH21                                          --------->ANAC46       ----------------->AGL1      --------->ANAC46             --------->ANAC58           <------ZmHOX2a(2)                   ---    ----------->RAV1(1)            --------->ANAC46          --------->ARR11(3)        --------->YAB1 ------>YAB1                 <-------TEIL --------->ANAC58   <---------ARR11(3)       <-------------- ------ATHB12         ----------->GT1 ------->TEIL          --------->GLK1(1)--------->WOX13(1)  ---- --->WOX13(1)  ---------->DOF2     --------->ANAC58   --------->MYB52(1) ----------->GT1 <---------YAB1   tcacatccacagaaacacaaagaattgaaaattcatcacgaacctcgccaccgagataacagagatcaccagaagaggtcaatccagtatcatgaaacgc  468700                            <---------ATERF1(1)                            ------>NtERF2                           <---------TCP20                           <---------TCP16(1)                           --------->ARR14(2)                          <---------At4g35610                          --------->At4g35610                        <---------RAP2.3(2)                        <---------RAP2.6(2)                       <---------LBD16                      <-----------RAV1(1)                 <-----------------AGL3                      --------->ARR14(2)                 ----------------->AGL3                      --------->GLK1(2)                 ----------------->AGL2             <---------ARR14(3)         --------->ARR14(2)<---------ARR14(2)       --------->ARR11(3)      --------->HSFB2a(2)<---------RAP2.3(1)        --------->ARR14(3)      <---------HSFB2a(2)<---------ATERF1(1)        <---------ARR11(3) ----------->HVH21   <-------MYC3   <-------MYC3    --------->ARR14(2) --->NtERF2 --------->TOE1(3) <---------ALFIN1      <---------ARR14(2)                 <---------ATHB12 ---------TaNAC69(2) ------->MYC3   ------->MYC3   <---------CCA1(2)     <---------LBD16            - ----->DEAR3(1)  ----------------->AG   <-----------GT1     <---------GLK1(2) <---------YAB1       <-   cgagcgacccagaaccctaaccatatgcggctccaccatgtgtttccctcccaatatcttcagaatcgtcgttttccctgatgattcaaatcactcatct  468800                                                                         ----------->HVH21                                                                         --------->TOE1(2)                                                                        --------->DEAR3(2)                                                                        ===============HOX2a_HOX2a                                                                        ------>ZmHOX2a(2)                                                                       --------->CCA1(2)                                                                       <------ZmHOX2a(2)                                                                       ================HOX2a_HOX2a                                                                      --------->ARR14(2)                                                                      --------->AGP1                                                                      <---------ARR14(2)           ------>ZmHOX2a(2)                                        ----------->ARR10          <------ZmHOX2a(2)                                   ------>NtERF2                ------>ZmHOX2a(2)         <---------ARR11(3)               --------->MYB52(1)  ----------->RAV1(1)         <------ZmHOX2a(2)         --------->ARR11(3)               <---------DOF5.7(2)--------->DEAR3(1) <------ZmHOX2a(1) -------->YAB1              <---------ANAC58            --------->MYB52(1)      ==================HOX2a_HOX2a --------ATHB12             <---------ANAC58   ------->TEIL --------->At4g35610 =================HOX2a_HOX2a   aatcaaattgagatctcatacagacacatttcgagctaaatagataacgaatttcaaataccagcgccattagatccgacgaggagacaccgatcgctgg  468900                                                                             --------->ANAC58                                                                             --------->ANAC58                                                                             --------->ANAC55(2)                                                                             --------->ANAC55(1)                                                                        ----------->HVH21                                                                      <---------ANAC55(1)                                                                      <---------ANAC58                                                                      --------->ANAC55(2)                                                                      <---------ANAC58     ------>ZmHOX2a(2)                                                                      <---------ANAC55(2)  ==========                                                   <---------WRKY18(1)----------->GT1     ===========                                                  ----------->HVH21   <---------ANAC46    <------ZmHOX2a(2)                                               <---------MYB46(3)    <-------TEIL        <---------ARR14(3)                                              <---------ANAC46      --------->CCA1(2)    --------->ARR11(3)                                            <---------MYB46(3)     --------->ARR14(2)    --------->ARR14(2)                                            --------->MYB55(2)     <---------ARR14(2)    <---------ARR11(3)                --------->ARR11(3)         --------->ALFIN1       ===============================HOX2a_HOX2a                <---------ARR11(3)         <---------DEAR3(1)     ================================HOX2a_HOX2a               --------->GLK1(1)           <---------AtMYB61      <------ZmHOX2a(1)      <---------ARR14(2)               <---------GLK1(1)          <---------MYB52(1)    --------->LBD16          --------->ARR14(3)         <---------WOX13(1)              --------->LBD16       --------->HSFB2a(2)      --------->GLK1(1)       --------->ATHB12                 --------->LBD16        <---------HSFB2a(2)      <---------GLK1(1)      <---------YAB1                   <---------LBD16         <---------LBD16     <---------LBD16 <-    <---------ANAC58                 ====================================HOX2a_HOX2a --------->LBD16    <---------ANAC58                 <------ZmHOX2a(2)    <---------DEAR3(2) <---------ANAC55(2)-----   aattaagcgtgattgagaaatcttcaataagtggtttcgatcccggtggtggatgaccgtcgattccaggatacgtgaaacgtaatccggagatctcaac  469000                                   --------->ICU4                                 <---------------AGL15                                 --------------->AGL15                                ----------------->AGL3                                <-----------------AGL3                                ----------------->AGL2                               ------>NtERF2                              --------->DEAR3(1)                              --------->DREB2C(2)                              --------->ANAC46                             --------->MYB46(3)                            <---------ATERF1(1)                            <---------At5g28300                          ----------->HVH21                         <-----------HVH21          <----------DOF2<-----------TGA1        <---------At4g35610<---------ALFIN1   <---------GLK1(1)    --------->ANAC46                                       <---------DAG2 =========================HOX2a_HOX2a     <-----------GT1                      <----------DOF2 =========================HOX2a_HOX2a  --------------->AtSPL3                 *TSS --------MYB52(1)     ------>ZmHOX2a(1)--------------->AtSPL8       <----------DOF2    <<<<<<<<<TBF1 ---->MYB46(3)     ------>ZmHOX2a(1)   <---------------AtSPL3       <---------DAG2 <-----------GT1   cgttgaattccgcttcttctcctcctccgtcaccgccatttttagtacctctcccttgctcttctctctgctttacttatacttttttcttcttcagacg  469100                                                                             <---------DAG2                                                                          <---------ANAC46                                                                       --------->ALFIN1                                                                      <-------MYC2                                                                      <-------MYC3                                                                      ------->MYC3                                                                      ------->MYC2                                                                      ------->PIF5                                                                      <-------PIF5                                                                     <---------O2                                                                     <---------TGA1a                                                                     --------->TGA1a                                                                     ----------->RAV1(2)                                                                     ================================                                                                     ===================bZIP_DOF                                                                     <---------bZIP60(2)                  --------->DAG2                                     <---------ANAC58         <------MYB83                                                ================================         <------MYB46(1)            <---------------AGL15            --------->O2        <---------MYB46(3)          --------------->AGL15            --------->ANAC55(2)      <-------GAMYB  --------->ARR11(3)                              <---------ANAC55(2)           --     --------->MYB111(2)           <-----------------AGL3            <---------ANAC58              ==     --------->MYB111(1)           ----------------->AGL3           ------------>OsbHLH66      <-----     <---------MYB46(3)       --------->ANAC58                    ----------->HVH21            ======     --------->MYB46(2)       --------->ANAC58                  <---------At4g35610   --------->ANAC58     --------->MYB55(2)       --------->ANAC46                  --------->At4g35610 --------->CCA1(2)     --------->MYB52(2)<------------CBF                     --------->TOE2(3)<----------DOF2<--------    <--------P   ---------->DOF2  ------>NtERF2            <---------ICU4<------NtERF2--------->ANAC58   tttttggtagttggtgaagaaaagttattgaaacgacaccatttttggtgaagttttttaaacattagctcacgtggcgctttaagagacgctagttctt  469200                                  <---------ANAC46                                  <---------ANAC58                                  <---------ANAC58                               --------->ALFIN1                             <---------ANAC58                             <---------TGA1a                             <---------bZIP60(2)                                                   <-                             <---------ANAC58                                                      --                             <---------ANAC46                                                     ---                             <---------O2                                                         ---                             --------->O2                                                         <--                  <---------AHL20(2)                                                              ---                  --------->AHL20(1)                                                              <--       <---------O2          --------->TGA1a                      <------NtERF2             ---------       <---------bZIP60(1)  <-----------------------TaNAC69(2)   ------>NtERF2            <---------YAB1       --------->bZIP60(1)  <------NtERF2                       --------->DEAR3(1)       --------->TOE2(3)       --------->O2        ------>NtERF2                        <---------DEAR3(1)      <---------ICU4 =====bZIP_DOF   --------->AHL20(2)    --------->REM1(2)        --------->ANAC46        --------->ATHB12 =========bZIP_DOF--------->AHL20(2)<------NtERF2          <---------ICU4               --------->YAB1 -------->DOF2   <---------AHL20(2)------>NtERF2           --------->MYB52(1)          <---------ATHB12 ======================================bZIP_DOF            <-----------GT1      ----------->GT1   <-- -----DOF2    --------->AHL20(2) <------NtERF2          --------->YAB1          <----------ID1  *TSS- ======================================bZIP_DOF        <---------YAB1<---------MYB52(1)--------->ICU4 -ARR11(3)----------->GT1 ----------->HVH21           --------->AHL20(2)      ---------->DOF2   -----   taaaagacgacgtcgttaaattaattaggcgacgtggcgcgagtagagaccatcgatataataacgacgccgttttgagaaaaagaaaaatcattaataa  469300                                              ------>ZmHOX2a(2)  <---------ZAT14                           --------->ARR14(2)  --------->ZAT14                           <---------AGP1 -----ZmHOX2a(2)                            <---------ARR14(2) ------->CCA1(2)                            <---------ARR11(3) ------>AGP1                                --------->ARR11(3) ------>ARR14(2)                           <---------CCA1(2) -------AGP1                          <---------ARR14(2) ------>ARR11(3)                      --------->ARR14(2)            --------->AHL20(2)        ------- -------ARR14(2)                  <---------HSFB2a(2)        --------->LBD16        <---------At5g28300 >YAB1<-----------RAV1(1)         <---------LBD16           <---------LBD16        <-----------GT1 -------ARR11(3)                  --------->HSFB2a(2)      <---------LBD16   <---------At4g35610 ----->ZmHOX2a(2)             <---------GLK1(1)       <---------GLK1(2)      <------NtERF2<----------DOF2 ------>ARR10                 --------->GLK1(1)<----------DOF2 ----------->GT1   <----------DOF2 <---   gatctgtactgttgttcttcatcgtctcgctgatttctcggatttggatctttgaagattatcgggggaaaaaaatggcagcgatttacagtctttacat  469400                                      ====================HOX2a_HOX2a                                      ------>ZmHOX2a(2)                                      XXXXXXXXXXXXXXXXXXXXX>MIR831                                     =====================HOX2a_HOX2a       --------->ZAT18                                     <------ZmHOX2a(2)                      <---------ZAT18                                    --------->ARR11(3)                 <---------ANAC58                                    <---------ARR11(3)                 <---------ANAC46             <---------MYB46(3)  <-------TEIL                          <---------ANAC58            <---------AtMYB61    --------->SPL7                       <---------ZAT2         <-----------RAV1(1) <---------------AtSPL8                   <---------At4g35610      <---------ARR14(2)     <---------------AtSPL3                   --------->ZAT2      --------->GLK1(2)      --------->ANAC46                   ------>ZmHOX2a(2)      --------->ARR14(2)  <---------REM1(2)                --------->HSFB2a(2) <-----------GT1         <---------HSFB2a(2)               <---------HSFB2a(2)  <----------DOF2 -->ANAC55(2)--------->MYB55(2)<---------SPL7      ------>ZmHOX2a(1) <---------TOE1(2) ------ICU4<---------MYB52(1)--------------->AtSPL8====================HOX2a_HOX2a  <---------AtLEC2   aattaacaaatctggtggtttgatattctacaaggtacgatctctccatcttcctcttgttctcgatctcgcagcttgtggactttccatgtctagagaa  469500                                                      <------ZmHOX2a(2)                      <---------LBD16                 ==========================HOX2a_HOX2a            ----------->GT1                          <---------ARR11(3)           <---------TOE2(3)       ---------->DOF2   --------->ARR11(3)                             -        <---------WOX13(1)       --------->AtMYB61  <---------At4g35610  <------ZmHOX2a(1)         --   tgacgagctaattgatgttaatttcgagggatagaccaaaagatgaaatttttgagatcactaggtttagtagaaggagtgttttcggtattaatctagg  469600  Previous    Next  AGI:  At5g02270.1    Description:  ATNAP9 (Non-intrinsic ABC protein 9). Identical to Non-intrinsic ABC protein 9 (NAP9) [Arabidopsis Thaliana] (GB:Q9LZ98); similar to POP1 [Arabidopsis thaliana] (TAIR:AT5G44110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17385.1); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 467106    to: 469078    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g02280.1    Description:  synbindin, putative. similar to synbindin, putative [Arabidopsis thaliana] (TAIR:AT1G51160.1); similar to synbindin, putative [Arabidopsis thaliana] (TAIR:AT1G51160.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN66318.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Sybindin-like protein; (InterPro:IPR007233) Range:  from: 469296    to: 470283    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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