Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->ANAC55(2)                                          <---------ANAC55(2)                                          --------->ANAC46                                          --------->ANAC58                                          --------->ANAC58                                          ----------->GT1                                         ------->TEIL                                     <---------------AtSPL8                                     <---------------AtSPL3                                    <---------ANAC58                                       <---------                                    <---------ANAC46                                      <---------ANAC58                                    <---------ANAC58                                <---------DAG2                            ------>NtERF2<-------TEIL                       <---------ARR11(3)                            <---------RAP2.6(3)                             --------->ARR11(3)                ----------->GT1<----------DOF2                       <----------DOF2<----------DOF2      --------->ANAC55(2)  --------->RAP2.6(2)                <----------DOF2    <-----------GT1  ---    <-----------GT1<-----------GT1  <---------AtLEC2  <---------TOE2(3)    <<<<<<<<<RAP2.2<---------ANAC58   ctatttttacctattgtttagttactaggccgacttttgcatgtacgtaaatttttgatgtattctttattctttttagatattcactttttgctttaga  462800                                                           --------->YAB1                                                         <-----------GT1                            -                                                        <-----------GT1                             <                                                        --------->YAB1                              <                                   <---------ICU4   <---------RVE1(1)                 <---------ANAC58                                  --------->ICU4    <---------CCA1(1)                 <---------ANAC46 -DOF2               <---------AHL20(2)      --------->ATHB12                --------->YAB1    <----- ------->DOF2<---------ZAT6 <---------LBD16 <---------ATHB12          --------->YAB1  <---------ANAC58   gaaagtttgaaacaagtgttcatttttttttggggaataagtaccaaagattggatatttatcatcttatactcataaaacataattttcgtattttttg  462900                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)         <---------AHL20(2)                                                          --------->AHL20(2)        --------->AHL20(2)                                                        --------->AHL20(1)        <---------AHL20(2)            <---------WOX13(1)                          <---------AHL20(1)<        --------->AHL20(1)  --------->AHL20(2)                                    --------->AHL20(2)- ---------->GT1             <---------AHL20(2)                            <---------ANAC46     ------ ---------PCF2             --------->AHL20(2) <----------DOF2         --------->ARR14(2)       ------ ---------ANAC46<---------AHL20(2)  --------->ATHB12                  <---------ARR14(2)       <----- ------RAV1(1)  --------->AHL20(2) <---------YAB1  <--------P    <---------ANAC46 <---------AHL20(2)-   tggggtcaaatttaatatttaaaaaacaatttaaatagtgattgaacactttggtaagtatgcattctcgtgaattcggtggaataaatttatattagat  463000                                                                                      --------->AHL20(2)    ----------->GT1                                                                <---------ICU4 --ZmHOX2a(2)                                                                     <---------ATHB51 -- ---->CCA1(2)       --------->YAB1                         ---------->DOF2        --------->ICU4<---- ----ARR11(3) --------->ANAC58                            --------->AHL20(2)      <---------AHL20(2) --->ARR11(3) --------->ANAC58                       <---------YAB1               --------->AHL20(2)- ---------O2  --------->ANAC55(1)                 <---------AHL20(2)       ----------->GT1      ----- -------->O2  --------->ANAC46                    <---------YAB1    --------------->AGL15       <---- --->ARR14(2) <---------ANAC55(2)               <---------ICU4      <---------------AGL15    -------- --->AGP1     --------->ANAC55(2)              --------->ICU4      <---------ANAC55(2)<---------AHL20(2) ----ARR14(2)<---------LBD16         <---------AHL20(2)   <---------AHL20(2)    --------->YAB1  <---- -------->ANAC46    <-----------GT1 <---------AHL20(2) --------->YAB1 --------->AHL20(2)   ----------   ccacgagggaaaaaatacggaattacaatatagttttttttatttgataatttttattaataaaagaatacttaaattagaaaaataattaaaaaaaggc  463100 -------->DOF2 -----ANAC58 -------->DAG2                           <---------ALFIN1 ------>GT1                        <---------ANAC58 -----ANAC46                       <---------ANAC58 ->DAG2                           --------->ZAT2                                                  <-- -----ANAC58                     <---------TOE1(2)         ------>ZmHOX2a(1)           --------->AtMYB61 >DOF2                          ------>ZmHOX2a(1)       *TSS              <----------DOF2    --------   gtaaagtcatttgaagcctccataagtagccttcctagcttcccctctccctctcacattcctctcttctctctctcttttcccaaaaaccaaaaccttt  463200                           ---------->DOF2                        <------NtERF2                        --------->RAP2.3(1)                       ------>NtERF2                       <---------ORA47(2)                       <---------RAP2.3(1)                       <---------ERF1                       <---------ATERF1(1)                      <---------ANAC46                   <-------GAMYB                   --------->ANAC46                      <---------RAP2.3(3)               <---------MYB46(3)              --------->LBD16                      <---------DREB2C(2)               --------->MYB55(2)             <---------LBD16                      <---------RRTF1(3)            <-----------RAV1(1)       ------->GAMYB            <---------WRKY38(1)                     <---------AtMYB61        --------->ANAC58            <---------WRKY12 ----------->GT1     --------->ARR14(2)          --------->ANAC58    --------->SPL7    <---------RRTF1(2)         <---------MYB52(1)          --------->ANAC46  <---------SPL7      <---------DEAR3(1)        <-------GAMYB              <---------ATERF1(1)  --------->LBD16     <---------RAP2.6(2)      <---------MYB46(3)         <---------WRKY12--------->LBD16 --------->ANAC55(2)  <---------ATERF1(2)     <---------ANAC46            <---------WRKY38(1) <---------ANAC58     <---------RAP2.3(2)     <---------DEAR3(1)      <---------RAP2.6(2)--------->LBD16 <---------ANAC58     --------->ATERF1(2)     <---------RAP2.6(2)<----------DOF2    <---------ARR14(2) ---------GT1  --------->MYB46(3)  <-----------GT1  <---------YAB1<----------DOF2   --------->ARR14(2) ->TOE2(3) --------->WRKY18(1) --------->AHL20(2)<---------ARR14(2)  --------->RAP2.6(3)<---------LBD16   tttccgtaccaaggtcaacaaatggcggcgaaagtaattacatttatggcggttatggtggttactgcctttacggccaacgccaaaatccccggagttt  463300                             ------>NtERF2              --------->LBD16                         --------->O2                  --------->HSFB2a(2)                         ===========================bZIP_DOF                         <---------bZIP60(1)           --------->ANAC46                         --------->bZIP60(1)           <---------ATERF1(2)                         <---------TGA1a               <---------HSFB2a(2)                         --------->TGA1a               --------->ATERF1(2)               <------ZmHOX2a(2)    <---------LBD16   <---------LBD16                       ---------           <---------TOE1(2)<---------ALFIN1  ----------->HVH21                <---------ALFIN1          ------>ZmHOX2a(1) --------->DEAR3(1)----------->TGA1               --------->ANAC58     --------->ABI4(2)   --------->ANAC58   <---------At4g35610              --------->ANAC58       <     <---------MYB46(3)  <---------O2       --------->At4g35610     --------->ZAT14         <--------    <---------AtMYB61    --------->ANAC55(1)--------->ZAT2          <---------ZAT14        <---------ZAT2    --------->ALFIN1     --------->ANAC58   <---------ZAT2          <-------TEIL         <---------ALFIN1   <---------MYB52(1)    --------->ANAC46---------->DOF2------>NtERF2        <---------ALFIN1   -----   acaccggtggtccttggatcaatgctcacgccaccttctacggtgaagctgacgcttccggcactatgggtacacacacacacactctctcccacctcct  463400                                                                           <---------ANAC55(2)                                                                           <---------ANAC46                                                                        <---------ARR14(2)                                                                        <---------SPL7                                                                        <---------PCF2                                                                      <---------MYB46(3)                                                                      <---------------AtSPL8                                                                     --------->ALFIN1                                                                 <---------ANAC46                                                                 <---------ANAC58                                                                 <---------ANAC58                                                                 <---------ANAC55(1)                                                             <---------MYB46(3)                                                    <----------DOF2--------->ALFIN1                                             --------->ARR11(1) <-------TEIL                       --                                            --------->YAB1<------MYB83<---------------AtSPL3       <-                                            -------->HAHB4<------MYB46(1) --------->SPL7           <-       <-----------GT1                     <---------YAB1<---------AtMYB61<-------TEIL            <-- >AtMYB61  <---------YAB1                  <---------ATHB12 <---------DEAR3(1)                   ---- ---------MYB52(1)                        <---------TOE2(3) --------->ALFIN1                    <---- -ALFIN1 --------->YAB1                  --------->YAB1  --------->MYB111(1)                 <------- ->ZmHOX2a(1)                   <---------YAB1--------->CCA1(2)<---------ANAC46              <-------   ctgtttttttttcattatagacataaatgtttctattattcactaatgatacgactttgtaggtggtgcgtgtgggtacgggaatttgtatagccaaggt  463500              <---------RAP2.3(1)             <---------RAP2.3(2)             <---------RAP2.3(3)             <---------DEAR3(1)            --------->RAP2.6(3)       <---------REM1(2)     <---------ZAT14     --------->ZAT14                                                                          <------MYB83     --------->ZAT18                                                                          <------MYB46(1)     <---------ZAT18                                                                         <-------  <---------ANAC46                                                                         <------ZmHOX2a(1) ------->ANAC55(2)                                                                      <---------LBD16 --------ANAC46  <----------DOF2                                                        <-----------RAV1(2) --------ANAC55(2)                                                       <---------ANAC46--------->LBD16 -------LBD16<---------RAP2.6(2)                                    --------->At4g35610============== ----->MYB52(1)<------NtERF2                                   <----------DOF2       --------->ARR11(3) -----ARR14(2)------>NtERF2  <---------DAG2                   <---------ANAC58      --------->YAB1 --TOE2(3) <---------ATERF1(1)      <<<<<<<<<<<<<<<<<LFY      <---------ANAC58     <---------ATHB12 --TOE1(3)--------->ANAC46   --------->TOE2(3)     --------->ALFIN1 <---------At4g35610------>ZmHOX2a(2)   tacggagtgaacacggcggctttaagcactgccttattcaacaatggtttgagttgtggctcttgctttgagcttaagtgtatcaatgatccaggatggt  463600                                                                                 <------MYB46(1)                                                                                 ----------->GT1                                                                                 <------MYB83                                                                                --------->MYB111(1)                                                                                <---------MYB46(3)                                                                                <---------DEAR3(1)                                                                                <---------AtMYB61                                                                                --------->MYB111(2)                                                                                --------->MYB55(2)        <---------GLK1(1)                                     <---------STY1(2) --------->MYB46(2)        --------->GLK1(1)    --------->ABI4(1)                --------->STY1(2)<---------MYB55(1)   <    --------->HSFB2a(2)      ------>NtERF2                   --------->ANAC58  <--------P     =======    ------>ZmHOX2a(1)       --------->DREB2C(2)              --------->ANAC58 <-------GAMYB------>ZmHOX2a(1)    --------->LBD16         --------->ANAC46         <----------DOF2         <---------MYB46(3)     -    <---------HSFB2a(2)     --------->DEAR3(1)       --------->TOE2(3)       --------->MYB55(2)------   <---------LBD16        <---------At5g28300        --------->TOE1(3)       --------->MYB111(2)    < --AtMYB61    <---------ATHB12                   ------>ZmHOX2a(1)  <<<<<<<<<<<<<<<<<LFY   ========== ==========HOX2a_HOX2a   <-----------GT1  <---------ZAT18 <---------ATHB12  <---------AtMYB61 ------>ZmHOX2a(1)   gtcttcctggaaacccatcaattcttatcaccgccactaatttctgccctcctaactttaatcaagctagcgacaatggtggttggtgtaatcctcctcg  463700  Previous    Next  AGI:  At5g02260.1    Description:  ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9). Identical to Expansin-A9 precursor (EXPA9) [Arabidopsis Thaliana] (GB:Q9LZ99); similar to ATEXPA3 (ARABIDOPSIS THALIANA EXPANSIN A3) [Arabidopsis thaliana] (TAIR:AT2G37640.1); similar to expansin [Litchi chinensis] (GB:ABO32367.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro:IPR007117); contains InterPro domai Range:  from: 463156    to: 465244    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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