Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->LBD16                     <---------ANAC55(2)                     <---------ANAC58                     <---------ANAC46                     --------->ANAC55(2)                     <---------ANAC58                                                      <---------                    <---------LBD16                                                       <---------ARR14(2)                 <-------GAMYB                                                            --------->ARR14(2)                --------->MYB111(2)                                                       ---------->TaMYB80                --------->MYB52(2)                                                        ------->TEIL                <-----------RAV1(1)                                  <------MYB46(1)   <---------ANAC55(2)                --------->MYB55(2)                                   <------MYB83      --------->ANAC55(2)                <---------MYB46(3)                                 <---------WOX13(1)  <---------ANAC46               <--------P                                        --------->ATHB12     <-------TEIL ---->ICU4     <---------MYB55(1)                               <---------YAB1    <---------ICU4  <-- -----YAB1    <-------GAMYB                                    <---------MYB59    <---------------AtSPL8 --YAB1      <---------MYB46(3)   <---------At4g35610      ----------->HVH21      <---------------AtSPL3   aatcggcattgtaagcggttgttgcgggacttattctgctatcgccagattaatcggcgaaatgacctgattggttttgcagaataagtacgtatattcg  430500                                               <---------ATHB12            ---------->TaMYB80               --------->MYB52(1)          <---------MYB52(1)              <<<<<<<<<<<<<<<<<LFY                  <---------AHL20(2)  -  <---------KAN4(2)                       >>>>>>>>>>>>>>>>>LFY  --------->ARR11(3)             <----- -TaMYB80----------->GT1       <---------MYB52(1)               <---------ARR11(3)             ------ -------TOE1(2)<---------AHL20(2)   <---------YAB1       <---------ANAC46   <------------------------ANAC81   aaggaataaaccggtatatacttgaataaaaccggtttttgataaaccaatggttttttgtgtgaagataatccaatttgatttttttttttggtatttt  430600                                                                                   <---------AHL20(1)                                                                           --------->MYB52(1)                                                                       --------->AHL20(2)                                                                      <---------AHL20(2)                                                                      --------->AHL20(2)                                                                   --------->AHL20(2)                               <---------ZAT6                     --------->AHL20(2)                      <---------------AGL15                       <---------AHL20(2) -------->YAB1        --------------->AGL15                     --------->YAB1     --------->AHL20(1) ----AHL20(2)      <-----------GT1     <---------AHL20(2)   --------->AHL20(2)     --------->ARR11(3) --->AHL20(2)<-------TEIL  --------->ZAT14                  <---------AHL20(2)  <---------GLK1(2)   attcatagttttaagtccattttactcaatgtagtcttcatttttttttttcatttgctcatttaaaaataaataaataacagaatattttggaaaatgg  430700                                                                                  <------------CBF                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                              ---------->DOF2   --------->AHL20(1)                                                   ------->GAMYB               --------->AHL20(2)                                                 --------->At4g35610    --------->YAB1              -                                                 <---------At4g35610    <---------ICU4            ---                                                ----------->RAV1(1)    --------->ICU4          <-----              <---------AtLEC2      --------->HSFB2a(2)    <----------ID1  --------->YAB1  <-------TEIL        --------->ZAT6              <---------HSFB2a(2)   <---------------------WRI1     --------->ARR14(2) <---------ZAT14    <---------WOX13(1)         <---------WRKY38(1)   --------->YAB1      <---------ARR14(2)   gactggagtaacacttgcattgatggatttacacagttttggaagttagtcaacagagaagacgaaaagaacaataatcaaaaaaattgcaaattcgtag  430800                                      <---------AHL20(2)                                      --------->AHL20(2)                                ------------>CBF                                --------->LBD16                                                     <         --------->ARR11(3)    --------->ANAC46                                                     <         <---------ARR11(3)   --------->ANAC46                                                      <        --------->RVE1(1)   --------->REM1(1)                                                       <        --------->CCA1(1)   --------->ANAC46                           <---------AHL20(2)           -  ------>ZmHOX2a(1)    --------->ARR14(2)                             --------->AHL20(2)           -- --------->TOE2(3)     <-----------ARR10       ----------->GT1      --------->TOE2(3)              -- ---------->GT1 <---------At4g35610  --------->YAB1          <---------TOE2(3)                     <- ------>GLK1(2) --------->At4g35610  --------->AHL20(2)   <---------YAB1                           -- ----TOE1(2)<-----------TGA1<---------ALFIN1---------->DOF2 ---------->DOF2*TSS                  <---   aatcctaaaaatatcgtcagcatcaaatctacaccgcaattaaaataaaaggaaacaaatattaaagaaacattaaatagttttctctccattgatatgt  430900             <---------GLK1(1)   <---------ARR14(2)   --------->ARR14(2) --------->LBD16 ---------ANAC46 ---------ANAC58 ---------ANAC58   <----------DOF2 ---------------AGL15 -------------->AGL15 --------------->AGL3 --------------->AGL1          <------NtERF2 ----------------AGL2        --------->LBD16                                   --------->ZAT14     <- --------------->AGL2       <---------LBD16   <---------MYB52(1)               <---------ZAT18 <----- --------GT1 --------->GLK1(1)--------->LBD16<-------GAMYB<---------CCA1(2)    <---------ZAT14<------   ttccgtatatagaagaaatctctttgactcgccggaaaacaaaaccccgttgttctccgtctatctctccctctctctctctgcacatttcttctacctt  431000                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                        <------ZmHOX2a(1)                                                                                       ----------->GT1                                                                                    <---------bZIP60(2)                                                                                    <---------ANAC46      --------->CCA1(2)                                ----------->RAV1(1)       ----------->HVH21   <---------TOE2(3)                                  --------->ANAC58           ----------->TGA1 ---------DOF2                                        ----------->HVH21        <---------At4g35610 -----DOF2                      ------->TEIL          --------->ANAC46         --------->At4g35610 ---DAG2             <------ZmHOX2a(1)                --------->ANAC58    ----------->HVH21   -------   tctttgagatttgagaaaacagaggaagaagatgaaactcgacgaagaattcttacacgacagagaccattcgtttctgacagatgacgaggaaaatcaa  431100                                                       <------NtERF2                                                      ----------->GT1                                                      --------->LBD16                                                     <---------DEAR3(1)                                                  --------->ALFIN1       <---------ANAC46                        <------NtERF2                           <---------O2       <---------ANAC58                      <---------DEAR3(1)                        --------->ANAC46       <---------ANAC58                   <---------SPL7                               --------->O2    <-------PIF5                       ------>NtERF2<-----------------------TaNAC69(2) --------->ANAC55(2)    ------->PIF5                      --------->DEAR3(1)                         <---------MYB52(1) <---------ALFIN1                 --------->ATERF1(1)<---------ANAC46           <-------GAMYB      -- ---->ANAC58                     <---------ATERF1(1)<---------LBD16        ------>ZmHOX2a(1)      <-- ---->ANAC46               --------->MYB52(1)--------->ETT(1)             <---------ALFIN1     <----- ---->ANAC58              ----------->HVH21<-----------HVH21            ------>ZmHOX2a(1)----------->HVH21 --->WOX13(1)             --------->ANAC46<---------DEAR3(2)       <---------GLK1(2)   <---------ANAC55(2) --->DOF2       <---------------------WRI1<---------MYB46(3)      <---------At4g35610<-----------GT1   gcagcacttgcttgttccgacgatgaacacgacggagacgacgacggtcggagaggcggagaaaattcagattcctcctctccgttatcacgagaccgtt  431200                                                              <---------ICU4                                                             <---------YAB1                                                     --------->MYB46(3)                                                     <---------MYB52(2)                                                     <------------MYB.PH3(2)           <---------LBD16                      ----------->GT1       ------>ZmHOX2a(1)  --------->ARR14(2) ------->YAB1                          ---------->DOF2       --------->ICU4   <-----------GT1 -------YAB1                        ----------->RAV1(1)    --------->YAB1 <---------MYB52(1) ----MYB52(1)              --------->ANAC46  --------->MYB52(1)   <-----------GT1        <---------ARR14(2)   ctgataacaatctctcggatgtctcaaaccctccatggccacaaagctatcggtaacaaactcataattttcctctgttttttcaatctcgaattctcta  431300                               <---------AHL20(2)        <---------WRKY18(1)                              <---------AHL20(2)        --------->WRKY12                              --------->AHL20(1)        --------->WRKY38(1)                              <---------AHL20(1)        ----------->HVH21                              --------->AHL20(2)        --------->ETT(2)                            ------->TEIL             <---------MYB46(3)                <---------ANAC58               <---------RVE1(1)           <---------ATHB12                           <-------TEIL               <---------CCA1(1)          --------->ANAC58                   <---------DEAR3(1)              --------->ARR11(3)          --------->ANAC58             <---------ALFIN1<---------ANAC58              <---------ARR11(3)         --------->WOX13(1)<---------LBD16--------->AtMYB61    ------   aaattacaagagttcagatatttttagatgaatttatttcagacaatcaatggatttgttgaccggaatgactccaccttcggtgagtttcatgcctcaa  431400  Previous    Next  AGI:  At5g02170.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT5G02180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68912.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 427831    to: 430693    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g02180.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT3G09330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68912.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 430875    to: 433739    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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