Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------YAB1                                                <-----------HVH21                                               ------->GAMYB                                              <------------AtMYB77                                              <<<<<<<<<TAC1                                             --------->ZAT2                                  <-------      --------->AHL20(2)                    ------>MYB46(1)            <-------TEIL          <-------      <---------AHL20(2)                    ------>MYB83             <-------MYC3            <-------    --------->ANAC55(2)                     --------->MYB52(1) <---------bZIP60(1)           <-------    --------->ANAC58               --------->AHL20(2)          --------->REM1(1)             --------    --------->ANAC58               <---------AHL20(2)   <---------ANAC58                     <------- ---->At4g35610                   <---------ATHB12      <---------ANAC58                     <------- -----At4g35610         <---------AHL20(2)--------->MYB46(3)   --------->bZIP60(1)      <---------ICU4 ------RAV1(1)         --------->AHL20(2) <---------MYB59    <-----------GT1           <---------YAB1 ---GT1            ------->TEIL --------->WOX13(1)--------->ATHB12   ------->MYC3    --------->YAB1   ctgcataagtaattagagatgaacatttaatggccaattaatgacccaactgtcattggcttcttacatcacatgcatatcaactaatcttcattacgtg  427400                                                               -------->ATHB1                                                            <---------ZAT6 --ANAC55(2)                                              ----------->GT1 --bZIP60(2)                  --------->ARR14(2)   --------->ANAC58                              <--- --ANAC58               --------->ANAC58           --------->ANAC58                            ------ --ANAC55(1)            --------->ANAC58           --------->ANAC46                           <------ ->ANAC55(2)            --------->ANAC46     <---------AHL20(2)--------->ATHB51   <---------AHL20(2) --ANAC46          <-----------GT1         <---------AHL20(2) <---------YAB1      --------->AHL20(2) --ANAC58     <---------YAB1  <---------ARR14(2)   --------->AtLEC2               --------->AHL20(1)   tctatttctgtgttttataaataacctcgccagaaacgtttttatattttttcaagcaaatagtattattgtataaaaactaaattttttgtaaatgaac  427500                  --------->GLK1(2)                 <---------ARR11(3)                 <---------ARR14(2)                 --------->ARR14(2)                                                    --------->TOE2(3)                --------->HSFB2a(1)                                                 <-----------GT1    <-----------HVH21                                                              <---------AHL20(2)   --------->ANAC46                                                            <---------AHL20(2) <---------ANAC58--------->ARR11(3)                                            --------->AHL20(2) <---------ANAC55(2)                                                          <---------AHL20(2) <---------ANAC58<---------GLK1(2)                                            --------->AHL20(2) --------->ANAC55(2)             <---------HSFB2a(2)                         <---------YAB1 ------DAG2     <---------HSFB2a(1)                      --------->ATHB12 <---------YAB1 ->TEIL         --------->HSFC1(2)                      <---------ZAT6    --------->ICU4            < -----GT1       <---------HSFC1(2)        <---------ANAC46    <------ZmHOX2a(1)<---------AHL20(1)   -   cttacgcgtcagagtagaagattctttgaattgttcttgaagtttcttagatttagtagtgataggataatgggacattattaaatttatcttattggtg  427600                                                                                                -----                                              ----------->GT1                      <------ZmHOX2a(1)                                        <---------ATHB51                 --------->ATHB12       =====            ----------->GT1             <---------AHL20(2)               --------->YAB1    <---------         XXXXXXXXXXXXXXXXXXXX>MIR417--------->AHL20(2)                  <---------YAB1     ----------     ----------->GT1                <---------AHL20(2)                --------->YAB1     <---------At4g35610 ---------ATHB51           <---------ICU4     <----------ID1<---------LBD16 <---------TOE1(2)  ------ -------->ICU4           --------->TOE2(3)  <---------LBD16<---------LBD16  <---------TOE2(2)  <-----   gaataatgggaaaatcgtgaatttgttcattaatacatttaaattatggggaaaaacaaattcagggagacatcatcataggtaaggagactgctaatta  427700                     <--------ATHB1                     --------->ATHB51                     <---------AHL20(2)                     --------->AHL20(2)                     <---------ICU4                    <---------ATHB51            --------->TGA1a                            <---------ANAC58            ----------->GT1                            <---------ANAC46            ===============================================MYC_MYB            <---------TGA1a                            <---------ANAC58            <---------ANAC55(2)                     <---------MYB52(1)     =================bZIP_DOF                     <-------GAMYB     ---------->DOF2--------->ICU4                --------->MYB52(2) ----->DOF2 --------->ANAC55(2)                   <---------ANAC58 =====================bZIP_DOF                    <---------ANAC58 ------AGL15--------->O2                      <-------MYC3                 ------------>CBF         - ----->AGL15<---------O2    --------->ARR11(3)------->MYC3          <---------ANAC46         <------- --->AHL20(2)       <---------ATHB12         <---------ANAC55(2)    <---------ANAC58    <<<<<<<<<TBF1 ----AHL20(2) ----------->HVH21              --------->ANAC55(1)    <---------ANAC58 <<<<<<<<<TBF1  <   aagaatataaagaaacgtgacaataatttagaacttgaaaacagaacacgtttcgttgcgtcccctagttgcttcttctcaatcttcttcttcttctttt  427800                                                                                          <---------ARR14(2)                                                                                          <---------ARR11(3)          <---------MYB46(3)                                                              --------->ARR14(2)          <------MYB83                                                                    --------->ARR11(3)      <---------MYB46(3)                                                                 <---------HSFB2a(1)      <-----------RAV1(1)                                                               ----------->ARR10   <----------DOF2             *TSS                                              ---------->DOF2  <---------DAG2           --------->ZAT18                                       ==================== -------->ARR11(3)         <---------ZAT14            <---------REM1(1)        --------->ANAC58 ---DOF2  <------MYB46(1)<---------ZAT14            --------->At4g35610        --------->ANAC58 ---------ARR11(3)       --------->ZAT14      ---------->DOF2               <------ZmHOX2a(2)   tagaccttttgttggtttttgaaacagagcacagtagaagaatacaaacaaagtagatgaagcaaaacgagacattcgatcaagaaagggaagatttgta  427900                                                                                                   <-                                                                                                   <-                                                                                                 <---                                                                                             --------                                      <---------GLK1(1)                   ------>ZmHOX2a(2) <--------             <------ZmHOX2a(1)        --------->GLK1(1)                  --------->CCA1(2)  <--------   <-------MYC3                       <---------ZAT2                     <------ZmHOX2a(2)  <--------   <-------MYC2                       --------->At4g35610               --------->AGP1   <---------MYB52(1)   ------->MYC2               --------->MYB52(1)                   --------->MYB52(1)    <---------ARR14(2)   ------->MYC3 --------->At4g35610   --------->ZAT2       <---------CCA1(2)--------->LBD16 <--------  ================================bZIP_DOF               <---------DAG2 --------->ARR14(2)  ---------  --------->TGA1a        --------->ANAC58       --------->ANAC46<---------ANAC55(2)      --------->ARR14(2) <---------TOE1(2)       --------->ANAC58   <---------MYB52(1)  --------->ANAC55(2)--------->DOF5.7(2) ===========bZIP_DOF   ---------->DOF2<---------At4g35610<----------DOF2<---------ARR14(2)  <--------   tcacacgttcgatgaggaagatgaagaaagccaaacagagagctccgttccctcaactcctttatctcgtaacagatccgaagacgttcccgttccgtgg  428000                                                              --------->ICU4                                                              <---------ATHB51                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2) -----NtERF2                                        --------->At4g35610 --------HSFB2a(2)                                  --------->CCA1(2) ------ANAC46                                      --------->ARR11(3) ->LBD16                                           <---------AGP1                                 <-- -ANAC55(1)                                        <---------ARR11(3)                             <-- -ANAC46                <----------DOF2            --------->AGP1<---------YAB1                  <--- -ANAC58         <---------ICU4                    --------->ARR14(2)                            ---- -ANAC55(2)     <---------ATHB12 --------->ZAT14   <---------ARR14(2)                            ---- >ANAC55(2)--------->At5g28300   <---------ZAT14  --------->GLK1(1)                              <--- -ANAC58  ----------->GT1        --------->ZAT18  <---------GLK1(1) <----------DOF2           <------   cctcgaagttatcggtaaatcattttctttttaagtgctctgtttttgtaagagatctgaagaaattattctttagagaataattttggtgttcttgggg  428100 -------CCA1(1) -------RVE1(1)                     --------->REM1(1) ------ARR14(2)                     <---------ALFIN1 ----->ARR14(2)          <---------WRKY18(1)                                        ---------->DOF2 ----->ARR11(3)         --------->WRKY38(1)------>NtERF2                        <----------ID1 ------ARR11(3)      <---------MYB46(3)--------->DEAR3(1)                       --------->ANAC58 ---ANAC46--------->GLK1(2)       <-----------GT1           ---------->ID1      --------->ANAC58    <   atattttcagacaatctatggatttgttgactggagttacacctccgactagtacaagttttgtctcttcatttcgccagagacgacaaagctctgtttt  428200                                                                 <---------MYB52(1)                                                                <-------GAMYB                                                        ---------->DOF2                                                     --------->CCA1(2)                   --------->AtLEC2                  <------ZmHOX2a(2)                   --------->ANAC58                  ===========================HOX2a_HOX2a                   ------>MYB46(1)                  --------->ARR14(2)                      <--------                   ------>MYB83                     --------->AGP1                      <---------ANAC58    --------->DOF5.7(2)                             <---------ARR11(3)             <---------ICU4  --------->MYB52(2)   --------->MYB52(1)           <---------ARR14(2)   ------>ZmHOX2a(1)  <-------- <-------TEIL      --------->ANAC46        ---------->DOF2     <-----------RAV1(1)<---------ATHB12 -- ---------MYB52(1) --------->ANAC58<---------YAB1  --------->GLK1(1) <---------ZAT18    <---------ANAC58   cggttcgtttacttcttcaccaagcaaacagcaacttctcatagacaaagacgagatccaaagctctgttgtgtcctccatcaaatcatttcttgcttct  428300  Previous    Next  AGI:  At5g02170.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT5G02180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68912.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 427831    to: 430693    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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