Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         ------>ZmHOX2a(2)                                                    <---------ICU4                                                   <---------YAB1                                                 --------->YAB1                                                 <---------ICU4                <---------HSFB2a(2)                                                --------->ICU4                 <---------LBD16   ----                                                <---------YAB1                 --------->HSFB2a(2)                                              --------->YAB1                --------->GLK1(2)   <----                                              <---------ICU4    --------->ARR11(3)              <----                                             <---------ATHB12   <---------ARR11(3)              -----                                   ---------->DOF2 --------->ICU4<------ZmHOX2a(2)             <-----       ----------->GT1       >>>>>>>>>>WRKY63--------->ICU4 ---------->DOF2<---------GLK1(2)   <-----   atacttatatagttatatcatacattttcaagtcaacaaaagatgtaatcatcatgatcgcaaaaagatcagttatagattctcggaatcaacttcgtag  409400                                --------->ANAC55(2)                       <--------P                       <---------WOX13(1)                      <---------ANAC58                      <-------GAMYB                      <---------ANAC58                     <------MYB83                     <------MYB46(1)                     --------->MYB55(2)          --------->ZAT18       <---------ANAC55(2) ------->GT1         <---------MYB46(3)           --------->ARR11(3) --MYB46(1)          --------->MYB52(2)           <---------ARR11(3) --MYB83------->TEIL<---------AtMYB61     <----------ID1 ------>GT1        <--------P --------->ZAT6  ---------->DOF2                   <-----------------AGL1 ----TOE2(2)     --------->ALFIN1 ----------->HVH21                  ---------->DOF2--------->GLK1(2) ----TOE1(2)     <-----------RAV1(1)    ---------->DOF2       ----------->HVH21 --------->ANAC46   --   gttaaaaatgaatgcacaagtgttggttgataacacttgacaaaaagaaaaagataatgcataagtgacacaaaagacatcgacacaatctggcaaaaca  409500                            <---------ANAC58                            <---------ANAC58                         <----------DOF2                   --------->ALFIN1                       <-------TEIL                 --------->ZAT18                     <---------MYB52(1)            <---------ANAC58                   <---------TOE1(2)               <---------ANAC58 ------->WOX13(1) <-----------RAV1(2)          ---------->DOF2        --------->YAB1   gcaatccaaaactcactatctcaggtactttcttgatacaaataaaactaaaagcgtacaagtgtgagtttatcagaaacaaatgtccatagttgcaaga  409600             --------->AHL20(2)                <---------ANAC58                                  ----            <---------YAB1             --------->YAB1     ---------->DOF2             ------>ZmHOX2a(1)         <---------YAB1           ------------>CBF   --------->YAB1             <<<<<<<<<TBF1  <-----     <----------DOF2    <---------MYB52(1)     <---------ANAC58             ---------->ID1     ------   atataaactttgtgattatatgggccgtttctaaggcccaattagaatagcttgatcatcaaaagcccaacaagttttgttcttcttcctcgctctcaca  409700                                                                                                 ----                                                                                               <-----                 ------------>CBF                                                           ---------                --------->TOE2(3)                                                           ---------           <---------HSFB2a(1)                                                              ---------           <---------ZAT2                                                                   ---------           <---------HSFC1(2)                                                               <--------           --------->ZAT2                             <---------TOE2(3)                     ---------          --------->ANAC58                            --------->HSFB2a(2)                  ------>NtERF2      --------->ANAC58                  <---------ARR14(2)                                --------->ANAC46      --------->ANAC58                  --------->ARR14(2)                                <---------ALFIN1 ----------->RAV1(2)                <-----------------AG                            <---------ICU4 --------->At4g35610  --------->YAB1<---------LBD16   <---------HSFB2a(2)           --------->YAB1 ------>ZmHOX2a(1) --------->WOX13(1)--------------->AGL15                         --------->HSFB2a(1) ----->ANAC46 <-------TEIL          <-----------------AGL1 --------->At4g35610     <---------ATHB12 ----ALFIN1--------->HSFC1(2)  <---------DAG2   --------->DAG2                     --------->HSFC1(2) --->ZAT6 --------->ANAC58     <----------DOF2 ---------->DOF2                    <-----------ARR10   ctcctctgaagcaagcttcgtcaatctgaatcactttctctggatttggaaaagttatggaagatgaaattagttcgtttttcgaatcatccccacctca  409800                         --------->YAB1                         --------->TOE2(3)                       <-----------ARR10                                                        -----                       --------->GLK1(2)                                                        -----                       <---------ARR11(3)                                                      ------                       <---------ARR14(2)                                                 -----------                       --------->ARR14(2)                           <------ZmHOX2a(2)   <---------ANAC58 ----->At4g35610      <---------ARR14(1)                            <---------YAB1      --------->ANAC55(2) ------RAV1(2)        <---------GLK1(2)                            --------->ARR11(3)   <---------ANAC55(2) >ZAT2           <---------HSFB2a(2)                               <---------ARR11(3)   --------->ANAC46 >TGA1a          --------->HSFB2a(2)                        --------->ANAC46            <---------ANAC58 >O2          --------->GLK1(2)                             --------->ANAC58           <-------TEIL >ANAC46     <---------GLK1(2)                              --------->ANAC58          <-----------GT1 -ZAT2    <------ZmHOX2a(1)                           <-----------HVH21           --------->AHL20(2)< >bZIP60(2)----------->ARR10       <-------TEIL       <-----------TGA1     <---------MYB46(3)  <-----   gaagaacatggaggagattctagagaatcttaatgagttcatcaaactgaattcatcgtcacaaggcaagatcatagctgttgattatatacgtgacatt  409900    --------->ATHB12    --------->ATHB51    -------->ATHB1   --------->ICU4   <---------ATHB51                  <---------LBD16                             --------->ARR14(2) ---->ATHB12           ----------->GT1        <------ZmHOX2a(1)             --------->MYB52(1) ---->ATHB51  --------->ATHB12      <---------LBD16                        --------->MYB46(3) --->ICU4     -------->HAHB4  <---------AHL20(2)                 <---------ZAT14 <---------ARR14(2) >HVH21      --------->ICU4  --------->AHL20(2)                <---------bZIP60(1) ---------AHL20(2) ---------->DOF2  <-----------RAV1(2)        --------->bZIP60(1) ----YAB1    <---------YAB1  <---------AHL20(2)  <------ZmHOX2a(1)<-----------RAV1(2)   attgaattattgaaaatgattcaaagggtttttaaatttcagggggaaggaggattgtatgtgtgacttcagggggaacaacggttccattggagcaacg  410000                <---------ICU4          --------->At4g35610            ----------->GT1   <---------ARR14(2)     <------MYB83             --------->ARR14(2)     <---------ANAC46       --------->LBD16     ----------->GT1       <---------HSFB2a(2)     <------MYB46(1)       --------->HSFB2a(2)     <---------ANAC55(2)  <---------LBD16                                              --------->DAG2    --------->MYB111(1) <---------ARR14(2)                                            ---------->DOF2    --------->MYB46(2) <---------At4g35610                                      --------->TOE2(3)    --------->MYB59    <---------ZAT2   <---------At4g35610                     --------->TOE1(3)   <---------MYB55(1)  --------->ZAT2  --------->ALFIN1                  <---------HSFB2a(2)  <---------MYB52(1)   --------->At4g35610 <---------At4g35610           --------->HSFB2a(2) <-------   atgtgttaggtatatcgataatttcagctccggaaacagaggtgctgcttctactgagtaagttttgtttctcttatagaaaccctaataaagttgtggt  410100                                                       <------ZmHOX2a(1)                                                     --------->ANAC58                                                <-------TEIL                                             <------MYB83                                             <---------ANAC58                                             <------MYB46(1)              --------->CCA1(2)                                             <---------ANAC58             <---------GLK1(1)                     <----------DOF2    --------->ATHB12      <-----------HVH21----------->GT1             --------->YAB1------>ZmHOX2a(2)--------->MYB111(1)           --------->GLK1(1) <-----------GT1   <---------DAG2      <---------YAB1--------->ANAC58    --------->ARR14(2) --AtMYB61  <---------YAB1 ===================================HOX2a_HOX2a<---------ARR14(2)      <---   ttttctctgtttttatgatcactctttgatctaaattggttttgatttggtgcataaggaatttcgtcaaggctggatatgctgtgatatttctgtatag  410200                                                                                  <-----------RAV1(1)                                                                                  <---------AtMYB61                  --------->ANAC55(2)                                  <------MYB46(1)       --------->WRKY12             <---------ZAT14                    <------MYB83  <---------DOF5.7(2)            <---------ANAC46                  <-----------RAV1(1)<---------MYB46(3)  --------->MYB52(1)             <---------ANAC58       <---------ARR11(3)        <---------YAB1 ---ZmHOX2a(1)<-----------HVH21  <---------ANAC58       --------->ARR11(3)  --------->ICU4   gaggtaacgttggccttgtcatgtgtttctcaattgtgtgtagttgaaagataagtgagatttttgtttttgttggtaatggttatggtggtttttaata  410300  Previous    Next  AGI:  At5g02080.1    Description:  DNA/panthothenate metabolism flavoprotein family protein. similar to ATCOAB (4-PHOSPHO-PANTO-THENOYLCYSTEINE SYNTHETASE), catalytic/ phosphopantothenate--cysteine ligase [Arabidopsis thaliana] (TAIR:AT1G12350.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76608.1); contains InterPro domain DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085) Range:  from: 409808    to: 411554    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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