Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <-----------GT1                                                                    <-------TEIL                                                                   --------->CCA1(2)                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                              <---------LBD16                                                             xxxxxxxxxxxxxxxx>smallRNA(s)                                                             xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                       <---------ATHB12                      XXXXXXXXXXXXXXXXXXXX>MIR2111B*          ----------->GT1                                    XXXXXXXXXXXXXXXXXXXX>MIR2111A*         <---------TOE2(3)       <-------TEIL                ------>ZmHOX2a(1)      ------>ZmHOX2a(1)     ----------->RAV1(2)       --------->ARR14(2)            xxxxxxxxxxxxxxxx>smallRNA(i)  --------->ANAC58 ------>At4g35610    --------->WOX13(1)                      <---------LBD16       --------->TOE2(3) -->GT1------>ZmHOX2a(1)       <---------ARR14(2)          <XXXXXXXXXXXXXXXXXXXXMIR2111A/B --------->ANAC58   atctgcatcctgaggtttaaaaccaattaagcatatacatatgcgaatgtatagtttttaatcctcgggatacagtttacctcttccttactcaagaaaa  400500                                                                                                   <-                                                                                              <------                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                           --------->YAB1                                        <---------AHL20(2)                                 <---------ICU4                                       <---------AHL20(2)                                 <---------ATHB12        <-----------GT1 <XXXXXXXXXXXXXXXXXXXXMIR870                                     --------->WOX13(1)        --------->MYB52(1)    <---------HSFB2a(1)                 --------->TOE2(3)   <---------ATHB12        <---------DOF5.7(2)   <---------HSFC1(2)                 <---------YAB1     --------->WOX13(1)      --------->DOF5.7(2)     --------->HSFC1(2)            --------->MYB52(2) <---------ARR11(3)  <-     <----------DOF2 ---------->DOF2   --------->AHL20(2) <--------P           --------->ARR11(3) ---   cacttagctttaacggttttggagaaagaagaagcatcgaattaaatccatttgaaacaggttagttatcttagtgaagaatatatccatcaatcataat  400600                                                                                              -------                                                                                              <------                                                                                          <---------- -----MYB46(1)                                                     --------->ARR11(3)   -------->P ---ICU4                --------->ATHB12                           --------->AHL20(1)   ------>MYB83 -->ATHB51             <---------YAB1                              <---------AHL20(2)   ------>MYB46(1) ->ICU4              --------->CCA1(2)                             <---------AHL20(1)  <---------ALFIN1 --YAB1             <---------ARR14(2)                            --------->ICU4 <-----------HVH21 -----MYB83         --------->ARR14(2)                <---------AHL20(2)    <-----------GT1  <------- ------>MYB59   --------->ALFIN1<-------TEIL     <---------YAB1 --------->YAB1----------->RAV1(2)   ttggtctagtcattcgaagtgggatatgatttgatacatatagtctaaaatatgattttatgccagtaatattttgttttccctgtcccctacctatatc  400700         <------ZmHOX2a(2)        <---------ARR14(2)        --------->AGP1        <---------GLK1(2)        --------->ARR11(3)        --------->ARR14(2)        <---------ARR11(3)       <---------GLK1(1)                                                                     <-------      ----------->ARR10                                                           ------>ZmHOX2a(2)  <---------ANAC58                 <---------AHL20(2)                           <---------AGP1  <---------ANAC58                <---------YAB1                                --------->ARR14(2) -->ARR11(3)            <----------DOF2     <-----------GT1                <---------ATHB12  <------- ---ARR11(3)   <----------DOF2  --------->ATHB12                <----------DOF2 <---------ARR14(2) -------AGL3------>ZmHOX2a(1)  <---------YAB1      --------->YAB1  <---------ANAC58          <------- --CCA1(2)------>ZmHOX2a(2)  <---------At4g35610  <---------ATHB12 <---------ANAC58         <-------TEIL   tagagcttgagatcctccttttaaaacttttagatgattaatcgttttacaaatcatagtcccagactttcgttccaatctagatcggtttagatgcgtt  400800                                                                                          <---------TOE1(3)                                                     --------->LBD16                      <---------TOE2(3)                                                   <---------LBD16                       --------->MYB52(1)                                            <-------TEIL                    <------ZmHOX2a(1)                                           --------->ARR14(1)            <---------HSFB2a(2)                                           --------->CCA1(2)     <---------ARR14(2)      <---------DOF5.7(2)                                          <---------ARR14(2)     --------->GLK1(2)     --------->DOF5.7(2)        <-----------TBP                   --------->ARR14(2)     --------->ARR11(3)  <---------MYB46(3) --ANAC46                                 <---------GLK1(2)<---------ANAC55(2)    <----------DOF2 --ANAC58             >>>>>>>>>MYB2       --------->ARR11(1)  --------->AHL20(2)  <---------MYB52(1) --ANAC58         ------->GAMYB <---------TOE2(3) --------->MYB52(1)     --------->HSFB2a(2)    *TSS   ttgttttggaatttatacaacgaaaaccaaagtttagattaaaagattcgaaaaccggattacataaaatctggtccaggacccctttggttaacgaaaa  400900                             ---------->DOF2                     <---------At4g35610                 <-----------HVH21                 <-----------TGA1                --------->ANAC58                --------->ANAC58                                                                    <                --------->bZIP60(2)              ------>ZmHOX2a(1)             <---------YAB1       -             <---------ARR14(2)       <---------YAB1   <----------DOF2    --------->DAG2            =             --------->ARR14(2)     <------ZmHOX2a(1)------>ZmHOX2a(1)   ---------->DOF2           --    ---------->DOF2  --------->At4g35610<---------GLK1(2)          ---------->DOF2     <----------DOF2   ccagactaaagggcagaaacgtcatttgacaaaaagaaggatgattctctccttcctctttccccaatgcaaagaaaaagcattatagacttttcaagtt  401000           --------->ANAC58                 --------->YAB1                             ------->TEIL           --------->ANAC58              <----------DOF2                             <---------ZAT18           --------->ANAC46            --------->HSFC1(2)                           <---------ANAC58 ---------------AGL15                  <---------HSFC1(2)                           <---------ANAC58 -------------->AGL15                 ------->TEIL          <---------ATHB12       --------------->AtSPL8 ==================================================================================================== --------------->AGL1              --------->ANAC46    ------>ZmHOX2a(2)       --------->GLK1(2) ----   ttccgatataagcacgaaatcgctgtttctctcttcgacgaagctttgataatttgatctcaatcgatcgattctattgagaatttgtgtacctgttttc  401100                                                                      --------->ANAC58              <------ZmHOX2a(1)                                       --------->ANAC46            <---------TOE1(3)                                         --------->ANAC58            <---------TOE2(3)                                         <---------ANAC55(2)           --------->MYB52(1)                                         --------->ANAC55(1)     --------->DOF5.7(2)                                       <---------LBD16    --------->TOE1(3)                                         --------->ALFIN1      <---------ARR11(3)   ----------->GT1                                       <---------TOE2(3)          --------->ARR11(3)  <---------TOE1(3)                 <---------ANAC46  --------->ICU4  --------->ANAC55(2)  <---------TOE2(3)               <---------ANAC46    --------->GLK1(2)  --------->MYB52(1) ============MADS_MADS         --------->ALFIN1 ------>ZmHOX2a(2)  <---------ARR14(2) ------>ZmHOX2a(2) ----------->AGL15       --------->YAB1     <---------YAB1 --------->ATHB12    <---------MYB46(3)   ttataaggttaactaaggattgtggaatcagaagtgttgtgtttttgtgatcggagattatggattggggaaacgtaacggttgatgatctcttcgatgc  401200                                 ------>ZmHOX2a(1)                             <-----------HVH21                           ------>NtERF2                           --------->LBD16                           <------NtERF2                           <---------ATERF1(1)                          --------->DEAR3(1)                        --------->LBD16                        ------>NtERF2                                       --------------->AGL15                        <---------ATERF1(1)                                 <---------------AGL15                       --------->DEAR3(1)                                   ----------------->AGL1                       --------->ANAC46                                     ----------------->AGL2                      <---------LBD16                                       ----------------->AG                    --------->ARR14(2)                                     <-----------------AGL1                    <---------ARR14(2)                                     <-----------------AGL2                   --------->ATERF1(1)                                     ----------------->AGL2         --------->WRKY12--------->ATERF1(1)                               <-----------------AG         --------->WRKY38(1)--------->bZIP60(2)           <---------At5g28300<---------------AGL15  --------->LBD16 <---------ATERF1(1)                   <-------TEIL<---------CCA1(2)  --------->HSFB2a(2) --------->ATERF1(1)  <---------ARR11(3)     ------>ZmHOX2a(1)          <------NtERF2  <---------HSFB2a(2)<---------ATERF1(1)   --------->ARR11(3)    --------->TOE2(3)     <----------TaMYB80   tctccgagaagttgactggtcgtctccgccgcgtcctccgtctgagttcttctcaaggttcaccgttcctaaatctgtccctaaatgggatagtcgcctc  401300                                                                 ------>ZmHOX2a(2)                                                                <---------At4g35610                                                                <------ZmHOX2a(2)                                                               <---------AGP1                                                               <---------ARR14(2)                                   <---------ANAC58            --------->ARR14(2)                                <----------DOF2                <-----------ARR10                     ------>ZmHOX2a(2)                        <---------CCA1(2)            <---------------AtSPL3 <---------ANAC58  <-----------ARR10 --------->ZAT18    <------ZmHOX2a(2)                <---------ARR11(1)                         <---- --------->ZAT14   <---------ARR11(3)               <---------CCA1(2)          --------->WOX13(1)   - <---------ZAT18   --------->ARR11(3)           --------->AHL20(2)        <---------YAB1     <-------   aagtgcaatctctactagtacgatctctctctctctttcttgttcgccaatttcatatctattcggatctgatgttgtgatcaatctctcgttgagaatt  401400  Previous    Next  AGI:  At5g02040.1    Description:  prenylated rab acceptor (PRA1) family protein. similar to prenylated rab acceptor (PRA1) family protein [Arabidopsis thaliana] (TAIR:AT5G05987.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72272.1); contains InterPro domain Prenylated rab acceptor PRA1 (InterPro:IPR004895) Range:  from: 400896    to: 402948    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version