Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------AHL20(2)                                                         --------->AHL20(2)                                                 --------->YAB1                                                 <---------ICU4                                               --------->AHL20(1)                                   <      <-----------GT1                         --------->YAB1<---------YAB1                     <-----   ----------->GT1                          --------->AHL20(2)         <---------ZAT14     <--------- ---->GT1     ------->TEIL    --------->MYB52(1)--------->ICU4     <------ZmHOX2a(1)    <-----------GT1   atatcgagttactatgtatccatcgtttgaaatacccgttttaaaaaaaaataatgagatttatttttaggacttcagtatatatacgattaacttttaa  395200                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                                --------->ZAT18   <---------ANAC46                                                             <---------ZAT18   ---   <---------ANAC58                                                   --------->AHL20(2)          ---   <---------ANAC58         --------->YAB1                    <----------ID1   <------ZmHOX2a(1) <--- ---------MYB52(1) ----------->GT1                     ----------->GT1<---------AHL20(2)         ---- ------GT1    --------->ANAC58                       ----------->GT1  --------->AHL20(1) ----------->GT1 -DOF2        --------->ANAC58          <----------ID1 <---------ZAT6--------->AHL20(2)  <----------ID1   cagttgtgtgactaaaacgaaatgtaacaaaaataagagaaaactacaaaacaggtagtgaaaaatgacaaaaaaattgtaggacgctaagacgaaaaaa  395300      ---------->DOF2                              <---------TOE2(3)    --------->ANAC58                        ----------->GT1       --------->YAB1    --------->ANAC58                --------->ANAC58 --------->TOE2(3) ----->HAHB4                        --------->ANAC55(2)           <-----------GT1 ------>ATHB12                      --------->ANAC58<---------ANAC55(2)     --------->ANAC46 ------YAB1       <----------DOF2   --------->ANAC46----------->GT1       <-----------GT1 ----->ICU4--------->GLK1(2)      <-----------GT1 --------->MYB52(1)<---------YAB1     --------->AHL20(2)   tgattcaagaaagaatatgtcttttcaatttcagttttacgaaatcgtgtaataacgtaaatactaaatcacgatttcacagaaccatataaaatactaa  395400                 --------->TOE2(3)           --------->TOE2(3)          --------->YAB1          <---------ICU4          --------->ATHB12          <--------HAHB4          -------->ATHB1         --------->ICU4         <---------ATHB12       --------->WOX13(1)                                                --------->MYB46(3)        <-    --------->ANAC58                                                     <---------MYB52(2)     <----    --------->ANAC46                  ----------->HVH21          <----------DOF2             <-------    --------->ANAC58             <---------LBD16                <---------ANAC58           ------->TEIL    --------->ANAC55(1) <-----------GT1                         <---------ANAC58   ---------->DOF2---   aatcccacgcaatcattaaacttaattcaccattctacggatgacctatgagagagcattgaattggctttagtaacaaacaccaaaaagatgaatcttg  395500                                                     <---------AHL20(2) ------>MYB46(1)                                 <---------RVE1(1) ------>MYB83                                    <---------CCA1(1) --------MYB59                                  <---------ARR11(3) -----WRKY18(1)                            --------->TOE2(3)  <---------TOE1(3)       ----------->GT1 --ICU4   --------->ICU4                  <---------ICU4      <---------TOE2(3)     ---------->DOF2 -------------->AGL1       ------>ZmHOX2a(1)    --------->ARR11(3)           <-----------HVH21   accaaatttgtaatgctcatactaaattcctccaagtcttataaacattagatattttatattttaggttttcaaaatatgtcatataaagaaaaatttg  395600                                   --------->ARR11(3)                               ---------->DOF2           ------>ZmHOX2a(2)   *TSS<---------ARR11(3)                         --------->ZAT6      <--     <------------CBF        --------->AtMYB61                        <---------ARR11(3)  <---------- <-------TEIL        ---------->DOF2               <-----------GT1  --------->ICU4 <---------MYB52(1)   atatacatattgatcgtgcttcaaaaagacaccaaaagagcttctctctctcttaacctctcgtttcgccattatctcttacactgttactctctctctc  395700                                                                                           <------NtERF2                                                                                          ------>NtERF2                                                                                          --------->LBD16               <<<<<<<<<TBF1                                                              <---------DEAR4(2)            <<<<<<<<<TBF1                                                                 <---------ATERF1(1)         <<<<<<<<<TBF1                                                                   <---------ATERF1(2)      <<<<<<<<<TBF1                                  --------->At4g35610                 <---------DEAR3(1)   <<<<<<<<<TBF1        <---------At4g35610          <---------At4g35610                 --------->DEAR3(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             <---------ANAC46    --------->YAB1    --------->ATERF1(2) ----------------------ANAC81            <----------DOF2          <---------DAG2        <---------LBD16 --------------ANAC81  ------->TEIL      ------>ZmHOX2a(1)      ------->TEIL        ---------->DOF2   tcttcttcttcttcttcttcttctgcatctcatcgacatcatcctttcccatggctgatgcatacgagccttatcatgttcttcaacaaagccggcgaga  395800                                                                           <---------RAP2.6(2)                                                                           <---------ANAC46                                                                           <---------ANAC58                                                                         <---------ATERF1(1)                                                                        <---------DEAR3(1)                                                                        --------->ALFIN1                                                                      --------->ZAT2                                                                      <---------ZAT2                                                                     <---------DEAR3(1)                                                                     <---------AtMYB61                                                                     --------->ALFIN1                                                                  <---------ANAC46                                                                  <---------DEAR3(1)                                                                 <---------At4g35610                                                                 --------->At4g35610                                                                 --------->ATERF1(1)                                                                 <---------LBD16                                                                 <------NtERF2                                                                <---------RAP2.3(1)                                                                <---------ORA47(2)                                                                <---------RRTF1(1)                                                                <---------ERF1                                                                <---------DEAR4(2)                                                                ------>NtERF2                                                                <---------ATERF1(1)                                                                <---------RAP2.6(1)                                                               <---------RRTF1(2)                                                               --------->DEAR3(1)                                                               <---------RRTF1(3)                                                               <---------DEAR3(1)                                                               <---------RAP2.3(3)                                                               <---------RAP2.3(2)                                                               <---------ATERF1(2)                                                              <---------ABI4(1)                                                             ------>NtERF2--------->ATERF1(1)                                                             --------->LBD16 <------NtERF2                                                             <---------RAP2.3(1)                                                             <---------ATERF1(1)                                                           <---------LBD16<------NtERF2                                                   ------>ZmHOX2a(1)<------NtERF2                                                ------>ZmHOX2a(1)<---------ABI4(1)                                             ------>ZmHOX2a(1)--------->ATERF1(1)                                            <---------ALFIN1<---------DEAR3(1) <----------DOF2                                     <-----------GT1  ------>ZmHOX2a(1)--------->ATERF1(1)                                  <----------DOF2 <---------ALFIN1--------->ALFIN1                 <-                         <---------ALFIN1<---------ALFIN1 ------>ZmHOX2a(1)<---------ANAC58        --             <---------CCA1(2) <---------ALFIN1<---------ALFIN1--------->ATERF1(2)  ------>ZmHOX2a(1)   caaacttcgtattccatctctcgattcccacttccactttcaccctcctcctcctccttcctccggcggcggaggtggcgtctttcctctcgctgattcc  395900                  <----------DOF2                 <---------ANAC58                 <---------ANAC58               ------>NtERF2             --------->ATERF1(1)             <---------MYB52(1)            <---------ATERF1(1)           <---------DREB2C(2)           <---------MYB46(3)           <---------DEAR3(1)             ------->GAMYB         --------->ZAT2                   ----------->RAV1(1)         <---------ZAT2                  --------->MYB46(3)         <---------At4g35610            -------->P    --------->TOE1(3)         ------>NtERF2                --------->MYB46(3)                                <------NtERF2        --------->DEAR3(1)            <---------MYB55(2)                               --------->ABI4(2)     --------->ANAC46      ----------->RAV1(1)<---------CCA1(2)----------->GT1         ------>NtERF2    ------>ZmHOX2a(1)  --------->ANAC46------->GAMYB --------->ZAT6           <---------GLK1(1)    << --------GLK1(1) <---------ANAC46     <---------MYB111(2) --------->STY1(2)   --------->GLK1(1) <<<<< ------->GLK1(1)<------NtERF2--------->MYB46(3)<-----------ARR10--------->At5g28300   --------->ALFIN1   gatttcctcgcagccggtggctttcactccaacaacaacaacaaccacatatctaaccctagctacagtaatttcatgggatttctcggtggcccttctt  396000                                <---------KAN4(1)                              <---------ARR11(3)                        <------NtERF2                        <---------LBD16                       ------>NtERF2                      --------->DEAR3(1)                      <---------DEAR3(1)                     --------->ATERF1(1)                     <------NtERF2                    <---------ATERF1(1)                    <-----------HVH21                    ------>NtERF2                   <---------DEAR3(1)                   --------->DEAR3(1)                  --------->ATERF1(1)                  --------->RAP2.3(1)                  <------NtERF2 --------->KAN4(1)                 <---------ATERF1(1)                 <---------RAP2.3(1)                <---------DEAR3(1)     --------->DOF5.7(2)               --------->ATERF1(1)    <----------DOF2     <---------HSFB2a(2)              <---------ATERF1(1)--------->KAN4(2)        --------->HSFB2a(2)           --------->LBD16    --------->ARR11(3)          <---------ANAC46           <---------ZAT14   --------->GLK1(1)     <----------DOF2           --------->ZAT14 <------NtERF2 ---------->DOF2 <---------LBD16           <---------ZAT18--------->LBD16<---------DOF5.7(2)          --------->DEAR3(1) <---------GLK1(1) --------->LBD16       <---------ALFIN1<---------ATERF1(1)    --------->DEAR3(1)    <---------ANAC58      --------->MYB46(3)--------->ATERF1(1)  <---------LBD16        <---------ANAC58            <---- <<<<<<<TBF1 --------->DEAR3(1)<------ZmHOX2a(2)  --------->HSFB2a(1)                        -------- <<<<TBF1--------->ANAC46--------->DEAR3(1)--------->ANAC46--------->LBD16                <---------CCA1(2)   cttcttcatccaccgcagtcgccgtcgccggagatcattcctttaacgccggactttcttccggagacgttcttgtcttcaaacccgagcctctatctct  396100  Previous    Next  AGI:  At5g02030.1    Description:  LSN (LARSON); DNA binding / transcription factor. Identical to BEL1-like homeodomain protein 9 (BLH9) [Arabidopsis Thaliana] (GB:Q9LZM8;GB:Q8H147;GB:Q8LGJ2); similar to BLH8 (BEL1-LIKE HOMEODOMAIN 8), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G27990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15725.1); contains InterPro domain POX (InterPro:IPR006563); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Homeobox; (InterPro:IPR001356) Range:  from: 395631    to: 399038    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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