Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------ANAC58                        <---------ANAC46               <---------ATHB12             --------->YAB1                  ------>ZmHOX2a(1)         --------->AHL20(2)  --------->YAB1<---------ICU4      --------->TOE2(3)                  --------->YAB1 ------->WOX13(1)       <---------ANAC58    --------->TOE2(3)         <---------ATHB12 ------>MYB46(3)--------->YAB1      --------->TOE1(3)          <-----------GT1   acaatcaaatcagattaatcatcgtttcgttttgaaaaccctaattcctcaaaaatcccaatttttatcccaattaaaaatcgatcgaaatcgaaatgga  387700                                                                                                =====                                                                                               ======                                                                                               ======                                                                                               <-----                                                                                              -------                                                                                     ================                                                                                     <------ZmHOX2a(1)                                                                                     ================                                                                                    ----------->GT1                                                                                  ===================                                                                       --------->TOE2(3)      -------                                                                       --------->TOE1(3)      <------                                                                <---------AHL20(2)<------ZmHOX2a(1)                                                                --------->AHL20(2)===================                                                       <------ZmHOX2a(2)        --------->ALFIN1=====                                                      <---------ARR11(3)       <------ZmHOX2a(1)-----                                                  ---------->DOF2   <-----------GT1----------->GT1                                            ---------->DOF2   <----------DOF2  ======================                                        ---------->DOF2=====================================HOX2a_HOX2a               ----------->GT1      --------->HSFB2a(2)==================================HOX2a_HOX2a         --------->YAB1             <---------HSFC1(1)--------->ARR11(3)       ======================        <---------YAB1              <---------HSFB2a(2)===============================HOX2a_HOX2a ---   aacagaggttatgaaaattgttaaaacaaaattgaattcgagaaaagaaagaaaaagatcgaagctttaattaccttagaaggaggaggaaaaatggatc  387800      <---------HSFB2a(2)      --------->HSFB2a(2)      --------------->AGL15     ----------------->AGL2     <-----------------AGL1     ----------------->AGL1 ========================HOX2a_HOX2a ====================HOX2a_HOX2a ========================HOX2a_HOX2a -ZmHOX2a(2) -->ARR14(2) =HOX2a_HOX2a ==HOX2a_HOX2a ==HOX2a_HOX2a >TEIL<---------------AGL15 ---ARR14(2) =HOX2a_HOX2a                                                                                 <------ ====================HOX2a_HOX2a              --------->DAG2                                <-------- ->ZmHOX2a(2)                                ---------->DOF2         >>>>>>>>>TBF1          --------- =HOX2a_HOX2a                       <---------HSFB2a(2)          <------ZmHOX2a(1)          --------- ==HOX2a_HOX2a    <------ZmHOX2a(1) --------->HSFB2a(2)    <---------DOF5.7(2)             ------->TEIL ------>LBD16 <------ZmHOX2a(1)    <---------LBD16       --------->DOF5.7(2)       <------ZmHOX2a(1)   cgagaataccagaagaggaaggagaagaagggttttctctggaaccaaaaagctcagaggttaacgaggaagaagaacaaggagaggaagacgaagcttt  387900                                                                  ------->TEIL                                                                  --------->ARR14(2)                                                               --------->ANAC55(2)                                                               <---------ANAC55(2) <----------DOF2                                           --------->YAB1                         --- ----DOF2                                                 <---------YAB1                       ------ -HSFC1(2)                                            <---------At4g35610                   --------- >HSFB2a(1)            <-----------HVH21          <-----------HVH21            ------->TEIL <-------- >HSFC1(2)         <---------GLK1(1)             <----------DOF2  <---------ARR14(2)       <-------TEIL   cttctttcttccttccattggaattcgtcgctcgctctaaaaaaaaacactctttcagctattatacgtatatgtatgatgtatgtgtctatatacgtat  388000                              <-----------RAV1(1)                          <---------AHL20(2)                        <---------AHL20(2)                        --------->AHL20(2)                    --------->AHL20(2)                  --------->AHL20(2)   <---------MYB46(3)     <---------LBD16<---------AHL20(2)--------->ALFIN1   <---------ARR14(2) <---------AHL20(2)   --------->ARR14(2) --------->AHL20(2)     ------->TEIL                                   --------- -------->GT1     <---------AHL20(2)--------->ALFIN1                                        <-------- ->TEIL       --------->CCA1(2)   <---------ANAC58                                          <-------- >ANAC55(2)  --------->ARR11(3)   <---------ANAC58          --------->ANAC46                --------- -ANAC55(2)  <---------ARR11(3) --------->ALFIN1 ------->TEIL    ----------->GT1     ----------->GT1   gtgtaaatacggagagatatatatatatatatatgtgggtgtgggtgtatgtatcggtttatacgaagggtgaagttatagagagaattgtgaaaatatt  388100        --------->DAG2                    <-----------TBP      ---------->DOF2                    --------->GLK1(2)              <-----------GT1     <------ZmHOX2a(1)         <------MYB83<---------AHL20(2)         <----------DOF2 >AHL20(1)                     <---------DEAR3(2)                  ------>MYB83 -AHL20(1)                     <------MYB46(1)                     ------>MYB46(1) -ARR11(3)          *TSS      --------->MYB59                    <---------MYB59 >ARR11(3)    ----------->GT1<---------ORA47(1)            <---------YAB1                  <---------   tgggagaggaaaggggaagtaaaatgtataggtcggtcttgagaatttatagagatggatgatgaaacctaactttactactctactacaaatttgttgg  388200                                                      --------->AHL20(2)                                                    ------->TEIL                                                 --------->ANAC58                                                 --------->ANAC58             --------->bZIP60(1)         <---------TOE2(3)             <---------bZIP60(1)         --------->DAG2                         ----------->GT1           <---------ICU4    ----------->RAV1(1) --------->ANAC46             >>>>>>>>>ARR2     <---------MYB59--------->AHL20(2) ---------->DOF2<---------AHL20(2)     --------->ATHB12  <-----------GT1   <---------AHL20(2) ------------>MYB.PH3(1)    <---------AHL20(2) --------->ICU4 --RAV1(1) --------->YAB1   <----------ID1----------->GT1   <-----------GT1 <---------YAB1   ctatttaccaaaatcatgtcatttttttagacaacaaaaaaaaaaggttacacgaattttttatacatttttttgtttttgattgtaaaaatttagacat  388300                                                                   <---------AHL20(2)                       <---------ANAC46                           --------->AHL20(2)                    --------->ALFIN1                             <---------YAB1                   <-------MYC3                                -------->ATHB1                   <----                   ------->MYC3                                <--------HAHB4                 <------             ----------->HVH21                                 <---------ICU4             <---------DAG2           --------->ANAC55(2)                                 --------->ATHB51        <-----------GT1           <---------ANAC55(2)             <---------ANAC46   <---------YAB1      <---------ANAC58      <---------bZIP60(1)               <----------DOF2       --------->ICU4      <---------ANAC58      --------->bZIP60(1)            <-----------GT1    ---------->DOF2   <-----------GT1 <----------DOF2   ttattgtgtcatcacttgacatgtggagtatgagttttttttcttttgtgtattatgcaaaagaattattaaaaattcacaatttcgttttactttttat  388400                           <---------ANAC46                        <---------MYB52(1)                     ---------->ID1           <---------AHL20(2)           --------->AHL20(2)                      ---------->DOF2   <---------ANAC58 <-----------GT1             --------->AHL20(2)        --------->ICU4   <---------ANAC58<-----------GT1          <---------YAB1     ------>ZmHOX2a(1) -----YAB1 <---------AHL20(1)              <---------TOE2(3) ------>ZmHOX2a(2) ---AHL20(2)<---------AHL20(2)     --------->TOE2(3)       <---------ARR11(3)                   -----   ttttggcttacaattttttttttatcgttttgtataaccaaaattgacgattaaaaagcttgatcctctctaggtaatatttgggatgatatcaattgaa  388500                                                                                                   <-                                                                                                   --                                                       <------ZmHOX2a(2)                           <-                                                      <---------ARR11(3)                  ---------->DOF2                                                      --------->ARR11(3)         ==================== --------->ICU4          <---------YAB1       --------->WOX13(1)                 ----------->RAV1(1) ------>GT1            <-----------GT1--------->AHL20(2)               <---------ANAC46 <---------YAB1   gtaatatttgagttttgggataattttaccataggttgaatcaaatatcaattagagatcatctaatggtttttcgtagacaacaacaatatcaaagact  388600  Previous    Next  AGI:  At5g02020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55646.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15731.1) Range:  from: 386015    to: 388120    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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