Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  ---                                                                                              <------                                                                                              <------                                                                                            <--------                                                                                            ---------                                                                                           <---------CCA1(2)                                                        <---------AHL20(2)                <---------ARR11(3)                                              <---------ANAC46                            --------->ARR11(3)               --------->At5g28300            <---------ANAC58                         ------>MYB83              ----------->GT1                 <---------ANAC58                         ------>MYB46(1)              --------->TOE1(3)   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                --------->ANAC58      --------->ICU4             <---------KAN4(2)      --------->AHL20(2)          --------->ANAC58     <---------YAB1    --------->DAG2   <---------TOE1(3)               --------->AHL20(2)--------->AHL20(1) ----------->GT1      ---------->DOF2   <---------TOE2(3)              <---------AHL20(2) <---------AHL20(1) ---->GT1     --------->TOE2(3)<------ZmHOX2a(1)        <---------YAB1--------->AHL20(2) --------->AHL20(2)   atatagtaatattgaaccgtaaaaaaaagtagaggaattttcaaggttgtgtgttaatataaatgaacaaaatttaaaatactgacaccaaatatatctt  382800     ----------->GT1                 --------->YAB1 -------HSFB2a(2)                    ----------->GT1                     <---------ANAC58 ------>HSFB2a(2)              --------->ANAC58                          <---------ANAC58 ---ANAC58                     --------->ANAC55(2)                    <---------MYB52(1) ---ANAC58                     <---------ANAC55(2)            <---------------AtSPL3 -ARR11(3)                     --------->ANAC58          <---------TOE2(3)                   <------- >ARR11(3)           <---------AHL20(2)            <---------YAB1    <-------GAMYB <---------CCA1(2)   gtggaagttgtaaaaatagacaataaatgggataagtaatagtaatacaaactgttatagaggtattgtaccgttgcatacttgcatatcatttgatgaa  382900                                                         --------->ANAC55(2)                                                         <---------ANAC55(2)                                                         <---------ANAC55(1)                                                         --------->ANAC55(1)                                                         --------->ANAC58                                                         <---------ANAC58                    <-------                                                         --------->ANAC58                   <--------                                                         <---------ANAC58                   ---------                <---------YAB1                           <---------ANAC46                   ---------               <---------AHL20(2)                  <---------YAB1                           ---------               --------->AHL20(2)                  <---------TOE2(3)              <---------YAB1             <---------YAB1                   <---------AHL20(2)                 --------->TOE2(3)           <---------AHL20(2)                --------->AHL20(2)              <---------AHL20(2)          <---------YAB1                     --------->AHL20(1)           <---------AHL20(1)---------         <---------AHL20(2)                  <---------AHL20(2)           --------->AHL20(1)<<<<<<<<<   <---------DAG2                            <---------AHL20(1)        --------->AHL20(2)   ---------   <----------DOF2 <-----------GT1       ------>ZmHOX2a(1)      ----------->GT1  --------->YAB1    <- --YAB1<---------YAB1    <----------DOF2<---------MYB59  ----------->GT1 --------->AHL20(2)<---------   tacgactttatttttatttttatacttctttagttccaaattcctaatttaatatggttacgtaatttgtaaaaaatatataatcttattgaatacgtca  383000  <---------YAB1                                        <---------------AGL15 ----TGA1                                         --------->ANAC46 -ANAC55(2)                                --------->WOX13(1) >ANAC46                                 <---------MYB52(1) --------->YAB1 ----------->GT1 >ANAC58                                <-----------HVH21<---------------AGL15               -------- >ANAC55(1)                             --------->LBD16 ----------------->AGL1        --------->ZAT14 >ANAC55(2)                           ------>ZmHOX2a(2) ----------------->AG     --------->ICU4 <HY5 --------->AHL20(2)            ------->TEIL<-----------GT1    ---------->DOF2    <---------ZAT14 >ANAC58            <-----------ARR10<------ZmHOX2a(2)  --------------->AGL15 <---------AHL20(2) --------AHL20(2)  <---------CCA1(2)--------->ARR14(2) ----------------->AGL3 --------->AHL20(2) --STF1<---------AHL20(2)           <---------ARR14(2) ----------------->AGL2<---------MYB52(1)    <-   ttttatgattttatagttatcaaatctcatcgtagatggatccgtcaattacacgattcccataatagaaaaagaaacagttaattagtaaactatagta  383100                    --------->ATHB12                --------->ATHB12               <---------YAB1              <-----------TGA1             --------->bZIP60(1)             --------->ETT(2)             <---------bZIP60(1)                                ----------->RAV1(2)               <--      --------->ARR11(3)                                --------->YAB1                            ---     <---------CCA1(2)                                <---------AHL20(2)                  <------MYB83   --------->AHL20(2)                             *TSS--------->AHL20(2)                  <------MYB46(1)   <---------AHL20(2)                           <---------MYB52(1)                   --------->DAG2 --->GT1    ---------->ID1                <-----------GT1  --------->YAB1           ---------->DOF2 --------AHL20(2)<------------CBF       --------->AHL20(2) <---------ICU4         --------->ARR11(3)<   taaatttaaatcttgtcgtcattgatttggattagtttagaattaaacccgttgattaaaataatcacctggttactgagagaagataaagttggtgttt  383200                                                                    ------>MYB46(1)       <-----------RAV1(1)                                          ------>MYB83 <---------ARR11(3)                                                <---------ALFIN1 --------->ARR11(3)                                               --------->MYB46(3) -------AHL20(2)                                              --------->DEAR3(1) ------>AHL20(2)          <------ZmHOX2a(2)           <---------ZAT14 ---------CCA1(2)<-------TEIL  <------ZmHOX2a(1)      --------->ZAT14 <---------ATHB12  <----------DOF2   ttaaatcttatgttgaagatgcagagagatcgaggaagacagagcaagagaacctcttcactcacagacccactcactgcattttctcttcttttctcag  383300                                                                                         --------->ARR14(2)                                                                                         <---------ARR11(3)                                                                                         <---------ARR14(2)                                                                                         --------->ARR11(3)               --------->LBD16          <------ZmHOX2a(2)                               --------->GLK1(1)              --------->LBD16     --------->GLK1(2)                                    <---------KAN4(2)             --------->LBD16     --------->YAB1             <---------YAB1             ---------->TaMYB80            <---------LBD16    --------->ANAC58           --------->YAB1          --------->ANAC58        <-----------GT1        --------->ANAC58          <---------------AGL15    --------->ANAC58    <----------DOF2        --------->HSFB2a(2)           <---------YAB1       --------->ANAC58    <---------DAG2         <---------HSFB2a(2)   --------->YAB1               --------->ANAC58   aaaatacttttttcccccgagaaaatgttccacaagaatcagatcgaacaataagggttctcataaatgtaatgcgattcaagcacgagaatatccacag  383400                                                                                     <---------ICU4                                                                                     --------->YAB1                                                                                     -------->HAHB4                                                                                    <---------ATHB51                                                                                  --------->YAB1-----                                                                               ----------->GT1 <-----                                                                              <------NtERF2 <--------                                                                            <---------ANAC46---------                         --------->ARR14(2)                                 <---------ANAC58<------MYB46(1)           <---------HSFB2a(1)                                          <-----------RAV1(2) <------MYB83           --------->HSFC1(2)                                          <-------TEIL --------->ICU4           --------->HSFB2a(1)         --------->HSFB2a(2)            --------->CCA1(2)     <--------     <-------TEIL<----------DOF2       <---------HSFB2a(2)            --------->GLK1(2)     ---------    --------->CCA1(2)    <---------ARR14(2)                  ---------->DOF2<---------ANAC58<--------   agagagatacagaaggctccttttgagtatttgagcaagtttcagaactcgaagactgtgtttgaaagagagattcaggcgtagtaataatggatggttc  383500           --------->HSFB2a(2)           <---------HSFB2a(2)                                                                   ----          <XXXXXXXXXXXXXXXXXXXXMIR838                                                            ----     <---------ARR14(2)    --------->DAG2                                                       -----     --------->ARR14(2)  ---------->DOF2                     -------->P                         <---- ---->MYB52(2)   --------->ALFIN1                          --------->MYB46(3)                  <----- --TEIL   ----------------->AGL2                  <---------At4g35610                       --------- -HSFB2a(1)<---------------AGL15                  <---------ZAT2                            --------- >HSFC1(2)<-----------------AGL1                  --------->ZAT2                            <-------- -HSFC1(2)----------------->AGL1               <---------At4g35610                 ---------->DOF2 >HSFB2a(1)--------------->AGL15            --------->At4g35610             <------ZmHOX2a(1) <------ -MYB46(3)<-----------------AGL2   ---------->DOF2--------->At4g35610    <------ZmHOX2a(1)  <--------   gtcggaaaatttgccagaagtggaagagaaaggtagagaaagcagttgctgcagctcggaaacaaccagacaagaggaggaagaacaaagccctagctgt  383600     --------->GLK1(1)                                                         --------->ARR14(2)     <---------GLK1(1)                                                 <-------TEIL   <------ZmHOX2a(1)                                                  --------->ARR14(1) ----->SPL7                                                          --------->ARR14(2) ----->SPL1(2)                                                       <---------ARR14(2) ---->SPL1(1)       --------->LBD16                                  <---------GLK1(2) -----SPL1(1) <----------DOF2                                        --------->ARR11(1) ----SPL7 --------->ANAC46               --------->REM1(2)          --------->HSFC1(2) >ZAT2   <---------At5g28300      <------MYB83                      <---------HSFC1(2) >At4g35610  <---------GLK1(2)    <------MYB46(1)                   --------->HSFB2a(1)         <---- -ZAT2  <-----------GT1          <---------TOE1(2)                  <---------HSFB2a(1)     <-------- ----DOF2<---------LBD16        <---------MYB52(1)                 ----------->ARR10       <--------- ----------SPL14  <---------LBD16<---------AtMYB61             >>>>>>>>>TBF1   <---------ARR14(2)   acggaggatttcacggcttctccggtttcatctcgttggtctgtgaagaacatcgatggagagaagaagaagattcgttcggattcaagagtttcaggtt  383700  Previous    Next  AGI:  At5g02010.1    Description:  ATROPGEF7/ROPGEF7 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor/. similar to ATROPGEF5/ROPGEF5 (KINASE PARTNER PROTEIN-LIKE), Rho guanyl-nucleotide exchange factor/ [Arabidopsis thaliana] (TAIR:AT5G05940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69097.1); contains InterPro domain Protein of unknown function DUF315, plant (InterPro:IPR005512) Range:  from: 383150    to: 385847    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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