Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <------NtERF2                        --------->ANAC58                        --------->ANAC58                <-----------RAV1(2)     ------->TEIL                             --------->ARR11(3)            <---------ANAC58        <---------TOE2(3)                      --------->At5g28300            <---------RAP2.6(2)     --------------->AtSPL3                ----------->GT1            <---------ANAC58        <---------TOE1(3)                   <-------MYC3           <---------LBD16         <---------DOF5.7(2)                  ------->MYC3           --------->At4g35610   --------->DOF5.7(2)                    ------->MYC2             ---- ---At5g28300 ------>NtERF2   <---------ARR11(3)                        <-------MYC2           ------ ----GT1   <---------At4g35610--------->ARR11(3)                 ---------->DOF2 <---------ARR11(3)   ccgttcaagagtttgcggccagagggaggcaagatgttaacgtacttggaggccatgagaagacccaagaagcacatggtgaatacctttgcaattggca  379500                                              --------->DREB2C(2)                                              --------->DEAR3(1)                                             <------NtERF2                                            <---------ATERF1(1)                                            --------->MYB52(1)                                            ------>NtERF2                                           --------->DEAR3(1)                                           <---------ALFIN1                                          <---------ABI4(2)                                          --------->ATERF1(1)                                          <---------MYB55(2)                                          --------->MYB46(3)                                         <------NtERF2                                         --------->At4g35610                                         <---------At4g35610                                         <---------ATERF1(1)                                        --------->RAP2.6(2)                                --------->YAB1                                      <---------MYB52(1)                             --------->ANAC58                                    <---------ATERF1(2)                              --------->ANAC58                                    --------->ATERF1(2)                              --------->ANAC46                                   <---------LBD16                                ------>ZmHOX2a(2)                                 --------->AtMYB61                               <------ZmHOX2a(2)                                 --------->DEAR3(1)                             <---------ARR14(2)                                 <---------ALFIN1                            --------->ANAC58                                <---------MYB55(2)                           --------->ANAC58                                --------->MYB46(3) --------->GLK1(1)      <------NtERF2    <---------ICU4                     <---------ZAT14--------->DREB2C(2)                  ------>NtERF2  --------->WOX13(1)                     --------->ZAT14--------->DEAR3(1)       --------->ARR14(2) --------->ARR14(2)            <---------------AtSPL8--------->MYB52(1)   <---------AtLEC2 <---------DEAR3(1)--------->ICU4         <---------YAB1      --------->MYB46(3)    --------->At4g35610  <---------RAP2.6(2)-------->ATHB1 ------->HVH21   <-----------------------TaNAC69(2)<---------At4g35610 --------->RAP2.6(3)<---------ATHB12 --->bZIP60(1)<---------SPL7 ------>ZmHOX2a(2)--------->ATERF1(2)    --------->DAG2 --------->LBD16   tcacagcgattttgatggtaccgagcactgatccaccaccggcagccaccggcatctccatggaatcggctaaggcggcaaggatccgagcaatcattct  379600                                                                         --------->ATHB12                          --------->DAG2                                <---------YAB1                         ---------->DOF2        <---------ARR14(2) <---------RVE1(1)            <---------ZAT18                     --------->GLK1(2)  <---------CCA1(1)           ======            --------->ZAT18     <---------ANAC46--------->ARR14(2)--------->ARR11(3)           ------           --------->ALFIN1  --------->ALFIN1  <---------GLK1(2)  <---------ARR11(3)           ====== --------->GLK1(2)  <-------GAMYB <------ZmHOX2a(1)           <---------At4g35610           ---------   gagaattttgagggtggacttgggttgaaaagtggaggagaaacagagagaatcggagtctctgagatgatattttgatttgatgagagaagagaatcaa  379700                                               <---------At4g35610                                               ------>NtERF2                                              --------->DEAR3(1)                                              --------->RAP2.3(2)                                             --------->ORA47(2)                                             --------->DEAR4(2)                                             --------->ATERF1(1)                                             <------NtERF2                                             --------->RAP2.3(1)                                            <---------ATERF1(1)                                            <---------RAP2.3(1)                                          --------->SPL7                                         --------->ALFIN1                                        <-------MYC3                                        ------->MYC4                                        ------->MYC3                                        ------->PIF4                                        <-------PIF5                                        ------->PIF5                                        ------->MYC2                                        <-------MYC2                                        <-------MYC4                                        <-------PIF4                                       =========================================bZIP_DOF                                       --------->O2                                       <---------TGA1a                                       --------->TGA1a                                       ============================bZIP_DOF                                       ====================================bZIP_DOF                                       <---------PIF3(3)                          ----------->HVH21<---------DEAR3(1)                        <---------TGA1a--------->PIF3(3)                        --------->TGA1a<---------O2                        <---------O2 <---------ALFIN1                        ===========================================bZIP_DOF                        ===========================================bZIP_DOF                        --------->O2 <------------OsbHLH66                        =========================bZIP_bZIP               --------->TGA1a     <-----------HVH21               <---------O2        <----------------PIF3(2)               --------->O2     <---------ANAC58                     <----------DOF2 ========================bZIP_DOF --------->ANAC46              <----------DOF2 ---->DOF2     <---------TGA1a  <---------ANAC58        <----------DOF2             --------->ANAC58 =================================bZIP_DOF--------->ZAT18<---------MYB52(1)         --------->ANAC58 >GLK1(2)  ------>ZmHOX2a(2)    ----------->RAV1(2)    --------->TOE2(3)          ---------->DOF2   agacttctctcgatctctcgtgactctcgtgactgcctgccacgtgcgccgcttcttcctttacttctttccttttctaagcccaaaagccccttcaaaa  379800                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                                                                   --------->AHL20(2)                                   <---------YAB1                         <---------YAB1                                 --------->YAB1                 <---------TOE2(3)  <---------AHL20(2)                  <---------AHL20(2)                            <---------TOE1(3)  --------->YAB1           <----------DOF2       <---------ICU4           --------->AHL20(2)   <---------AHL20(2)          <---------DAG2        <---------YAB1            <---------AHL20(2)   --------->AHL20(2)   <---------ALFIN1          <---------YAB1              --------->AHL20(2)   --------->AHL20(2)   cttccccacatacctttttttttattctgtttttattattactcaagtttagaacttcatttatttatggtttattttcatttaattaaaatactcaagt  379900                                           --------->TOE2(3)                                        ------>MYB46(1)                --------->ARR14(2)                                        ------>MYB83             <---------ANAC58                                        --------->ANAC58         <---------ANAC46                                        --------->ANAC46         <---------TGA1a                                        --------->ANAC58         <---------O2                                  --------->WRKY38(1)            <---------ANAC58                                  --------->WRKY12            ----------->HVH21                                <---------At4g35610          <---------MYB59                                ----------->RAV1(2)         --------->At4g35610         <------ZmHOX2a(2)                   ----------->GT1----------->HVH21         <---------At4g35610       <------ZmHOX2a(1)              ------->GAMYB     --------->At4g35610       <---------WRKY18(1)      --------->YAB1             <---------MYB52(2) <---------ZAT2            <-----------GT1         --------->ICU4        *TSS --------->MYB46(3) --------->ZAT2           ----------->HVH21     --------->ICU4     ---        <-----------GT1    --------->RVE1(1)         <---------YAB1    <---------ARR14(2)      ------   ttacaagtttttacaacaaacttgtaaaaatatcagctgaccaagcctcaaaactatgtttgacctgacttgggatttgggataatgaggatcacaacta  380000               ----------->GT1        --------->TOE2(3)              <----------ID1   <---------AHL20(1)                  ----------->GT1   <---------AHL20(2)           ----------->GT1   --------->ARR11(3)          ----------->GT1   --------->AHL20(1)        ---------->DOF2   <---------ARR11(3)   --------->ANAC58   --------->AHL20(2)   ------------------------>ANAC81--------->ARR11(3)                   ---------  --------->AHL20(2)    --------->ANAC58               >>>>>>>>>>GT-1        <---------ARR14(2)     < ------>AHL20(2)      ---------->DOF2---------->DOF2  --------->YAB1         --------->ARR14(2)     - --->YAB1     --------->ANAC46------------------------>ANAC81               <------ZmHOX2a(1)       -   taaaatatattcttaaacggaaataaaagcaaaaagataaaaagaaaaaaaaacaatgatatagttgatgatgccctaggatttggacacatcaacaaat  380100                                              --------->YAB1                                              <---------ICU4                                           <---------ICU4                                           --------->YAB1                                        <---------ICU4    --------->MYB52(2)                  --------->YAB1    <---------DEAR3(2)                 <---------YAB1    <------MYB46(1)                    --------->ICU4    <------MYB83                     --------->YAB1    <---------MYB46(3)              <---------YAB1   --------->MYB111(1)             --------->AHL20(1)   <---------AtMYB61               <---------AHL20(1)                                              <-  <--------P                       <---------AHL20(2)                                              -- <---------ANAC58                  --------->AHL20(2)                                         ------- <---------ANAC58                 --------->YAB1                                              <------ >MYB46(3)    <---------YAB1 ----------->GT1 --------->ICU4                                   <------ ---------MYB46(3)          --------->DAG2<---------YAB1                         --------->ZAT14   <- -------->ATHB12<---------GLK1(2)<---------YAB1                       --------->CCA1(2)       ------- -------->MYB55(2)        ---------->DOF2 --------->ICU4    <---------ANAC46     <---------ZAT14 ----   attggttggttccaacatgattctgtagaaaaggtattataataataataatcaagtttgtagaggggagagagatgaggcattgcagtaagcgatagct  380200                  <---------DOF5.7(2)         <---------HSFC1(2)         --------->HSFC1(2)         --------->HSFB2a(1)         <---------HSFB2a(1)      <---------ICU4 --------ANAC58 <---------MYB52(1)--------->YAB1 ------------------->WRI1        <---------YAB1 -->At4g35610   --------->DOF5.7(2) <---------YAB1                                 ---------->ID1 ---At4g35610 <---------MYB46(3) --------->ICU4                                  <---------ANAC58 ---ZAT2<---------ARR14(2)    ------>ZmHOX2a(1)                      <---------RAP2.3(3) --------ANAC58<-------GAMYB  <---------YAB1                         <---------ZAT18 -->ZAT2--------->ARR14(2)    --------->ICU4                    <---------SPL7   <---------ANAC46 -->NtERF2   --------->SPL7  --------->TOE2(3) ------>NtERF2   <---------ANAC46  <---------ANAC58   gccttgagggaatcgtccgttaatgcttcatccttattattactcatgctgccttcgtagtagtatcgtagggggctcttgtttcgtcgtctctgtataa  380300                    <---------TOE2(2)                                                      <---------At4g35610                    <---------TOE1(2)                                                      <---------ZAT2          --------->O2                                                                 --------->ANAC46         ------>MYB83                                                    --------->YAB1--------->ANAC58         ------>MYB46(1)                                        <---------ALFIN1   <-----------TGA1        <---------ALFIN1                                     --------->ANAC58      <-----------HVH21       <---------MYB59<-------MYC3                           --------->ANAC46     --------->bZIP60(2)       --------->MYB46(3)                                    --------->ANAC58     --------->ANAC46<--     --------->ARR14(2)                                    <---------ALFIN1   ------->TEIL --------->ZAT2     --------->PCF2<---------ALFIN1                       --------->MYB46(3)  -------->P   --------->At4g35610     <---------TCP15(1)     <----------DOF2       --------->ZAT14        <---------ICU4--------->ANAC58     <---------ARR14(2)--------->DOF5.7(2)        <---------ZAT14  <----------DOF2--------->O2    ---    <------ZmHOX2a(1) ------->MYC3     <---------YAB1--------->ANAC46 --------->YAB1<---------REM1(2)   cttggaggacccacctctctcccacgtttactttctctcttatgactcccactatactcaaacaccccactttcatcatcaacctcgtcacgctgctgta  380400  Previous    Next  AGI:  At5g01990.1    Description:  auxin efflux carrier family protein. similar to auxin efflux carrier family protein [Arabidopsis thaliana] (TAIR:AT1G71090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45361.1); contains InterPro domain Auxin efflux carrier; (InterPro:IPR004776) Range:  from: 377228    to: 379908    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g02000.1    Description:  unknown protein Range:  from: 380152    to: 380592    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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