Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                          -----------                                                                                         -------->P                                                                                         ============                                                                                         --------->MYB52(1)                                                                                       <---------MYB59                                                                  <---------LBD16      <---------MYB111(2)                                                               <---------ICU4    --------->ZAT6      <------MYB83 <---------ANAC58                           <---------YAB1  --------->WRKY38(1)      <------MYB46(1)                                         --------->ICU4  --------->WRKY12     <---------TOE1(2) ---------->ARF1                 --------->LBD16 --------->ZAT2  <---------MYB111(1) -------MYB46(3)   <---------ANAC58                   <---------ANAC46 <---------ZAT2  <---------MYB46(2) ----ANAC58   <---------ICU4                          <---------ANAC55(1)   <-------GAMYB------>MYB83 ----ANAC58   ------>ZmHOX2a(2)         --------->TOE1(3)   --------->YAB1  ========================= ----ANAC46 --------->ARR11(3)      ---------->DOF2   <---------ANAC58--------->ARR14(2) ------>MYB46(1) ---MYB46(3)<---------ARR11(3)  --------->AHL20(2)    <---------ANAC58<---------ARR14(2)--------->MYB55(1)   tgtttgctaggtttgatcttgacttgtctgccattttaaaaagcttaaaccttcttccgtggtcataattcggaactgggttgactctacctacctgctc  370000           <---------ANAC46         --------->O2         --------->TGA1a         <---------O2         <---------TGA1a         =========================bZIP_DOF         ========================================bZIP_DOF    --------->ZAT18                                                                                --    <---------ZAT18                            ----------->GT1                           <---------YAB1 --------->ANAC58                            ---------->DOF2                           <---------AHL20(2) --------->ANAC58      <----------DOF2  ----------->GT1                               --------->ICU4 ->At4g35610 --------->ALFIN1          --------->DAG2                          <---------ANAC58   --- >RAV1(2)===============================================bZIP_DOF   <----------DOF2    --------->AHL20(2) ==================MYC_MYB            ---------->DOF2        <---------GLK1(1) <---------ANAC58   <-- ==================MYC_MYB         --------->YAB1       ---------->DOF2    <---------MYB52(1)    ----   cacaagtaccctcgtgtgtgtgagcctttttgaccaatagtaaagtagaaagtagaaagaaagaaacccctttagccattagcctgcatttattagtatc  370100                <---------ANAC58               <------NtERF2              <---------RAP2.3(1)              ------>NtERF2             <---------RAP2.6(2)             <---------RAP2.3(2)             <---------DEAR3(1)          --------->WRKY12          ----------->HVH21     ----------->RAV1(1)     ------>MYB46(1)     ------>MYB83   ------->GAMYB<---------ANAC58   --------->MYB46(3)  --------->ANAC58  --------->ANAC58                                              <----------DOF2 -------->P --------->RAP2.6(3)                          <---------WRKY12 --------->ANAC58                                     --------->WOX13(1) --------->ANAC58                       ====================bZIP_DOF ------->MYB46(3)                       <----------DOF2  <---------WRKY38(1) ------>At4g35610     <---------HSFB2a(2)          <-----------HVH21          <-----------HVH21 -------At4g35610     --------->HSFB2a(2)         --------->TGA1a   <----------DOF2<---------GLK1(2) ----->ANAC46<---------RAP2.3(3)    ---------->ID1=========================bZIP_DOF*TSS   agcaacccaacattgacggcgtttcgagacgcgctcttgtccctttcttctcatgtcagtcaacttctttctttcttctcagtcagagtctcagagagag  370200                                         --------->ANAC58                  ------------>CBF<---------ZAT14               ------>ZmHOX2a(1)  --------->ZAT14           <-----------GT1     --------->At4g35610        <---------AHL20(2)    ------>NtERF2 ------->TEIL                       <---------TOE2(3)        --------->AHL20(2)   <---------RAP2.3(3)  <---------YAB1        <-----------------AG    <---------RVE1(1)     --------->ALFIN1  <---------TOE2(2)           =============================    <---------CCA1(1)    <---------ANAC46--------->ANAC55(2)        ---------->DOF2   --------->ARR11(3)    <---------ANAC58<---------ANAC55(2)<---------ANAC58   --------->MYB59   <---------ARR11(3)    <---------ANAC58--------->ANAC58   <---------ANAC58   <---------TOE1(3)    -   agagagatattttattcctccccaatggctgggggctgtagtcacgcatgttattttagtaggcttgcattaaagcccatttaggttataaggcccataa  370300                                                       ------>MYB83                                                       ------>MYB46(1)                                                     --------->AtMYB61                                                     ------->GAMYB                                  <------NtERF2      --------->MYB46(3)                                <---------ANAC58     <---------MYB111(1)                                <---------O2        --------->MYB46(3)               --------------->AGL15                <---------MYB52(2)               <---------------AGL15                <---------MYB55(2)              ----------------->AGL2              --------->WOX13(1)              ----------------->AGL3      <----------DOF2             ----------------->AGL1 <---------DEAR3(2) -------->P         --------->At4g35610    <---------ANAC58 <---------WRKY12 --------->AHL20(2)   <---------AHL20(2)           --------->bZIP60(1)--------->ANAC58  --------->AHL20(2)            <---------bZIP60(1)--------->ANAC58 ==============================MADS_MADS --------->TOE2(3) <----------DOF2    ------------>CBF ------>TEIL------>NtERF2     <-----------HVH21 --------->WRKY18(1)      ------------>CBF        *TSS   tgtatttaataggctgcccatttagagaagactgtcgtcgcttcctttaagtcaaccaaccctttggattaaatccacaatgcaattcgtccaactaaaa  370400                                                                                   --------->GLK1(1)                                                                                   <------ZmHOX2a(2)                                                                                  <---------ARR11(3)                                                                                  --------->ARR14(2)                                                                                  <---------AGP1                                                                                  --------->ARR14(3)                                                                                  <---------ARR14(3)                                                                                  <-----------ARR10                                                                                  <---------ARR14(2)                                                                                  --------->ARR11(3)                                                                                  <---------ARR11(1)                                                                                 <---------CCA1(2)                                                                                 <---------ARR14(1)                                                                               <---------TOE1(2)                                                                              <---------LBD16                                                    <---------ALFIN1     --------->ZAT2                                                 --------->SPL7          --------->At4g35610                                               <---------SPL7            <---------ZAT2                                               <-----------HVH21         <---------At4g35610                                              <---------ANAC58        --------->LBD16                                     --------->ANAC58                 <---------At4g35610   ---------                                     --------->ANAC58                --------->ANAC46   <----------DOF2           --------->ATHB12   <---------O2    <---------ANAC58   <----------DOF2--------->LBD16         <---------MYB52(1)   ==============================================bZIP_DOF------>ZmHOX2a(2)      --------->MYB46(3)      <---------TGA1a--------------->AtSPL8 <---------LBD16<---------GLK1(1)   aactctcaaccgttgatttgattcacacacagacgagacaagacaattccgtcccctctctctctctctttccgcagctcgccggatctcctttgtcttc  370500                                  ---------->DOF2                                 <------ZmHOX2a(1)                        <-----------------AG                        ----------------->AGL2                        <-----------------AGL3                        ----------------->AG                        <---------------AGL15                        ----------------->AGL1                        ----------------->AGL3                --------->At4g35610        --------->LBD16            <---------MYB52(1)   ==========================HOX2a_HOX2a          <---------ANAC58     <---------TOE2(3)          <---------ANAC46<---------DAG2  <---------ANAC46          <---------ANAC58<----------DOF2 <---------ANAC58          ------>ZmHOX2a(2)       --------->ARR14(2)--------------->AGL15         ------>ZmHOX2a(1)       <----------DOF2   --------->LBD16      <-----------------AGL2         ====================HOX2a_HOX2a  <---------LBD16       --------------->AGL15          ===================HOX2a_HOX2a ----------->RAV1(2)    <-----------------AGL1      <------ZmHOX2a(2)          <---------DAG2     <<< <---------LBD16<---------At4g35610       <---------ANAC58         <------ZmHOX2a(2)<-----------GT1 ->ID1 <---------ARR14(2)<---------------AGL15     --------->ARR14(2)     <---------ALFIN1     <<<<<<   ttcccctgggttccgtttagctcaatccctttttaggaaagactccgtggctcgatcctagtcttggcgatcgcctctaccctttttgactctattcttc  370600                                                   --------->CCA1(2)                                                --------->ANAC46                                    <---------TOE2(3)   --------->At4g35610                                    <---------TOE1(3)   ----------->GT1                                <----------DOF2 --------->ANAC58 <<<<<<<<<TBF1                 <----------DOF2  --------->ANAC58                                  <-- <<<<<<TBF1              --------->ATHB12 <---------ANAC58                  <-----------GT1       <-- <<<TBF1                 <---------ICU4   <---------ANAC58            <---------YAB1  <----------DOF2   ttcttcttcattcatttcccctcttattcattgcctttagggtttcttacacgatatgagctaaatacgattttgatttcaccctaagctttcttctatt  370700                                                                        <---------ICU4                                                                        --------->YAB1                                                                  --------->At4g35610            --------------->AtSPL8                                <---------At4g35610            <---------TOE1(2)                                  <---------MYB52(1)                  <-           <-----------RAV1(2)                                <-----------HVH21                   ---           <---------ANAC46                                  <---------ZAT6                       <--       <-------GAMYB<----------DOF2                       <---------ALFIN1                  <--------      <---------MYB46(3)                                  --------->AtMYB61                 <--------      <---------DEAR3(1)                                 --------->MYB46(3)      <---------ARR14(2)-- -------ANAC58<---------ARR14(2)                        >>>>>>>>>>>>>>>>>LFY     --------->ARR14(2)-- -------ANAC58--------->ARR14(2)                       --------->ANAC46<---------ATHB12<----------DOF2   gcttctcgtcgttgcaggtactctttttttttgttttttggaaaacgcgttttctttccaccactgttagctaatcatcttcatatatgcttttagggtt  370800                   ----------->RAV1(1)                   ------>NtERF2                  --------->RAP2.3(2)                  --------->RAP2.3(3)                  --------->DEAR3(1)                 --------->ATERF1(1)                 --------->RAP2.6(1)                 <------NtERF2                 --------->RRTF1(1)                 --------->RAP2.3(1)                 --------->ERF1                <---------ATERF1(1)               <---------DEAR3(1)               --------->ANAC46              <---------LBD16        --------->ARR14(2)  --------->ATHB12 --------------AGL15     --------->YAB1 -------------->AGL3    <---------ATHB12 ---------------AGL1<------NtERF2 -TOE1(3)  --------->ANAC58<---------YAB1        --------->TOE1(1) -TOE2(3)  --------->ANAC58--------->ICU4 <---------ARR14(2)                  --------->YAB1       <- ------->TOE2(3)--------->LBD16<-------TEIL     ------>ZmHOX2a(1)     <---------At4g35610  <------NtERF2 ------------->AGL15--------->ATERF1(1)   --------->ARR14(2)     ------>ZmHOX2a(1)     --------->ANAC46   ttcttaaatggaaacgcccggcgccagtcatgattcatttaggggttctcctcgtagaaactccatcctctctgcttctaacatcatccaggcccctatt  370900  Previous    Next  AGI:  At5g01950.1    Description:  ATP binding / kinase/ protein serine/threonine kinase. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G53590.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G06840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45378.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21294.1); similar to hypothetical protein OsJ_018183 [Oryza sativa (japonica cultivar-group)] (GB:EAZ34700.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (In Range:  from: 364899    to: 370183    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g01960.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G65040.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65040.3); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G65040.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO45368.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 370397    to: 372966    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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