Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <----------DOF2                                                ------->TEIL                                            --------------->AtSPL3                       <---------WOX13(1)                          <---------ARR11(3)--------->DAG2                        ------>NtERF2                          --------->ARR11(3)--------------->AtSPL8               <---------RAP2.6(2)<                      ---------->DOF2       <---------------AtSPL3              <---------LBD16    -- -ZmHOX2a(2)   --------->YAB1              ---------->DOF2       --------->GLK1(2)--------->LBD16  --   acaaatgagaaccagtagcataactaaagaactctaattttagcgaaaagtacctctttgtagccataatctggctcaaatttccggctagattgacagt  364400                                                                          <-----------GT1                                                                     <---------YAB1                                                                    --------->SPL7                                                                 <---------ANAC58                                                                 <---------ANAC58                                                                <---------------AtSPL8                                                                --------------->AtSPL8                                                                <---------------AtSPL3     --------->ANAC46                               ---------->DOF2              --------->ARR11(1)             --------->ANAC58 <--------P------>ZmHOX2a(1)  <---------ATHB12            ----------->ARR10                --------->ANAC58 ---------MYB52(1)       --------->TOE2(3)        --------->ANAC46<---------SPL7  <---------ARR11(3) --------->GT1    <---------YAB1          --------->At4g35610--------->CCA1(2)    --------->ARR11(3) ------->LBD16 <---------MYB52(1)  <------ZmHOX2a(1) ----------->RAV1(1)  --------->MYB52(1)------->GAMYB   ccggtaagttatcctctgttacgataacatcaataaaggacagtagcttcagacacaacatagatttgggtacgattaactgattatcttccaacgcaat  364500                                                               <---------ARR14(2)                                                               <-----------HVH21                            <---------ZAT18                   <---------CCA1(2)                        --------->DAG2              <---------ANAC58                       ---------->DOF2              <---------ANAC46                      <---------MYB52(1)        --------->ARR11(3)       <---------At4g35610                     --------->LBD16   <---------HSFB2a(2)  <---------ANAC58         <<<<<<<<<TBF1                    --------->ANAC46   <---------HSFC1(1)   <---------ANAC58<---------At4g35610             <---------ICU4 --------->ZAT18     <---------ARR11(3)    --------->HSFC1(2)   <<<<<<<<<TBF1            <---------AHL20(2)  ------>ZmHOX2a(1)   <---------ANAC58  <---------HSFC1(2)<<<<<<<<<TBF1   ---------->DOF2 <---------LBD16     --------->HSFB2a(2)  --------->ANAC55(2)   <<<<<<<<<TBF1   tctttgaaagctaattcattacccgtaaagtgtcctccattctggaagaagatgtcgtcttcgcgtatcagaggcttctgcttcttcttcttcttcttct  364600                                                          --------->MYB52(1)                                                         --------->ARR14(2)                                                         <---------ARR14(2)                                                <---------ARR14(2)                                             --------->ANAC58                     ------>MYB83            --------->ANAC58                     <---------At4g35610                   <---------MYB59 <----------DOF2   --------->LBD16       --------->ALFIN1            <-----------GT1--------->At4g35610  --------->ARR14(2)--------->CCA1(2)     <------ZmHOX2a(2)--------->REM1(1)      --------->ANAC46 --------->At5g28300 --------->At4g35610   <------ZmHOX2a(1) ------>MYB46(1)       --------->MYB52(1)----------->GT1     --------->GLK1(2)   tagaaggatcaaatttactgacctacatcagcataagctttagcaaaacggaacccgaagaaacggtgatataagaggtggagaagctgaagcataccca  364700                                                                             --------->ETT(2)                                                                             <---------ETT(2)                                                                             <----------ARF1                                                                          <------NtERF2                                                                         ------>NtERF2                                                                         <---------MYB46(3)                                                                         <---------DEAR3(2)                                                                         --------->MYB55(2)                                                                        <---------DEAR3(1)                                                                       --------->ATERF1(1)                                                                       <---------LBD16                                                                       <---------MYB52(1)                                                                       <------NtERF2                                                                      <---------ATERF1(1)                                                                      <---------RAP2.3(1)                                                                      ------>NtERF2                                                                      <---------DEAR4(2)                                                                      <---------ERF1                                                                     --------->ATERF1(2)                                                                     <---------ATERF1(2)                                                                     --------->DEAR3(1)                                                                     <---------DEAR3(1)                                                                     <---------RAP2.3(2)                                                                    --------->ATERF1(1)                                                                    <------NtERF2                                                                    --------->RAP2.3(1)                                                                    <---------LBD16                                                    ----------->GT1<---------RAP2.3(1)                                              <----------DOF2      <---------ATERF1(1)                                         ----------->RAV1(2)       ------>NtERF2       --------->DOF5.7(2)             --------->ANAC58           --------->DEAR3(1)       <---------MYB52(1)              --------->ANAC46           <---------DEAR3(1)             ----     --------->YAB1                    --------->ANAC58         <-----------HVH21            --------   --------->GLK1(2)                 <---------ALFIN1--------->At5g28300<---------ANAC46     --------   tgaagaatcgttatctataacctcgagttcaagtttccaacacgcctgcttttgctgtaaatccatcgtcgccggcgggtcgacaagtttcagcgttgat  364800        --------->AHL20(2)        <---------AHL20(2)   <---------YAB1                            <-----------GT1  <------ZmHOX2a(1) --------->TOE1(2)                             <------MYB83 ----------->GT1    <---------LBD16       <------------CBF        <------MYB46(1) -->ZmHOX2a(2)--------->ANAC58  <---------WOX13(1)            <-----------RAV1(1) ->WRKY38(1)  --------->ANAC58 <------------CBF              <---------TOE2(3) <---------AHL20(2) ->WRKY12     --------->ANAC46--------->ATHB12           <------------CBF   ------->TEIL      <------   cggaggaaaattaaaaacgaaaccagggactgtgattgggcctgtattgggccttcagacattgatgttggtataacgaattttttttttttttttttga  364900                                                                      --------->DAG2                                                                     ---------->DOF2                                                               ----------->GT1                                                             <---------WOX13(1)                                                       <---------ARR11(3)                                                       --------->ARR11(3)                                     <---------At5g28300    <------------CBF                                    <-----------GT1   --------->GLK1(1)              <---------TOE2(3) --------->AHL20(2)    --------->RVE1(1)       <------MYB46(1)          --------->AHL20(1)    <---------RVE1(1)       ----------->GT1          --------->ARR11(3)    <---------CCA1(1)       <------MYB83             <---------AHL20(1)    <---------GLK1(1)           --------->ALFIN1      --------->MYB59           <---------ARR11(3)    --------->CCA1(1)        --------->DAG2      --------->MYB46(2) ---------->DOF2             <---------ARR11(3)      ---------->DOF2 ---YAB1     <-----------GT1    <---------AHL20(2)   --------->ARR11(3)----------->GT1   ---------->DOF2   ttcgaagtttggtattaacgatttttgaaaagaatatattacagtgtaactggaagatatctaattggttaaaaagtaagaaaggtggagtcaaagtata  365000                                                                                 ------>ZmHOX2a(1)                                  <---------WRKY38(1)                            <---------HSFC1(1)                                  <---------WRKY12                               --------->HSFC1(1)                             <------MYB46(1)                              ------>ZmHOX2a(2)                             <------MYB83                                 ==============HOX2a_HOX2a                           <--------P                                    ===============HOX2a_HOX2a                         --------->ATHB12                         --------->At4g35610                         <---------MYB46(3)     <---------ZAT2    --------->ZAT2 --------->HSFB2a(2)                        <---------ATHB12        --------->ZAT2    <---------ZAT2 <---------HSFB2a(2)                        --------->ICU4   <------ZmHOX2a(1)        <---------At4g35610                    ------------>CBF<------NtERF2              --------->At4g35610                    <-------TEIL --------->ATERF1(1)           <---------At4g35610    <---------HSFB2a(1)        <---------------AtSPL8  <-----------HVH21        ---------->DOF2 <------ZmHOX2a(2)    ------>NtERF2   tgtatagagatttgtacatagatgcaatggttggagtcagcgaggagcgatgctgggaacaaagccgctgctgagatcgcttcctagaaggctcgacgac  365100                                                      ------>NtERF2                                                     <---------bZIP60(1)                <---------ANAC58                                                     --------->ANAC58                   <---------ANAC58                                                   <---------TGA2(2)             --------->LBD16                                                  ----------->TGA1              <---------LBD16                                                --------->At4g35610            <---------LBD16<------                                         ----------->HVH21                   --------->ARR14(2)                                     --------->ZAT14 --------->ANAC58        <---------ARR14(2)            <-----------HVH21        <---------ZAT14 --------->ANAC46        <-----------HVH21<------     <---------ARR11(3)         --------->ETT(2)<---------At4g35610   ---------->ARF1   <---------ANAC46     --------->ARR11(3) ------>NtERF2--------->ZAT18 --------->bZIP60(1)     --------->MYB52(1) ---------->DOF2       --------->DEAR3(1)----------->TGA1             ---------->ID1   --------->ATHB12   tcgtaaaggtctcttgtcacattcgacgacgatgttgacagcactgacgaagatgacgccaattccactcttgtctccctatcgggggatgcttggagca  365200                       --------->LBD16                       ------>NtERF2                      --------->DEAR3(1)                      --------->ANAC46                   --------->AtMYB61                   --------->DEAR3(1)                   <---------ALFIN1                  --------->ZAT2                              --------->TOE2(3)                --------->AtMYB61                            --------->ANAC46                --------->DEAR3(1)                         --------->REM1(1)                <---------ALFIN1                   ===============================bZIP_DOF               --------->MYB46(3)                  <---------ANAC58      <---------ZAT2  --------->ANAC58             <---------ANAC46          --------->LBD16      --------->At4g35610                          <---------O2<---------ZAT14               <-------      --------->ZAT2  --------->ANAC58 <---------CCA1(2)   <---------ALFIN1 --------->RAP2.6(2)     -      <---------At4g35610           <------NtERF2  <---------TGA1a          --------->RAP2.3(2)     < ---At4g35610--------->REM1(1) ------>ZmHOX2a(1)   --------->O2--------->ZAT14               -------- ---ZAT14  ------>ZmHOX2a(1) ----------->RAV1(2)   <---------ANAC58    ---------->DOF2    <---------ALFIN1   gtgactccagctccttcaccacctccgccattcctggcctcatctctggtgagtcgtggctacacctcagtgccaaagccgcaaacttttcaacactttc  365300  Previous    Next  AGI:  At5g01940.1    Description:  eukaryotic translation initiation factor 2B family protein / eIF-2B family protein. similar to EIF2 BETA (EMBRYO DEFECTIVE 1401) [Arabidopsis thaliana] (TAIR:AT5G20920.3); similar to EIF2 BETA (EMBRYO DEFECTIVE 1401) [Arabidopsis thaliana] (TAIR:AT5G20920.1); similar to EIF2 BETA (EMBRYO DEFECTIVE 1401) [Arabidopsis thaliana] (TAIR:AT5G20920.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21302.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ67799.1); contains InterPro domain Translation initiation factor IF2/IF5, N-terminal; (InterPro:IPR016189); contains InterPro domain Translation initiation fac Range:  from: 363591    to: 364766    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g01950.1    Description:  ATP binding / kinase/ protein serine/threonine kinase. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G53590.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G06840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45378.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21294.1); similar to hypothetical protein OsJ_018183 [Oryza sativa (japonica cultivar-group)] (GB:EAZ34700.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (In Range:  from: 364899    to: 370183    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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