Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               =========================HOX2a_HOX2a                        --------->At4g35610                        <---------At4g35610                        <---------GLK1(1)                        --------->GLK1(1)                  <---------ANAC46           <------ZmHOX2a(1) ------>ZmHOX2a(1)           --------->GLK1(1) <---------At4g35610<------NtERF2               <---------ETT(2) --------->At4g35610--------->ALFIN1            --------->ETT(2)                     <---------LBD16 ------>At4g35610 <---------ANAC58             <------ZmHOX2a(2)  <----------DOF2 ------>ZmHOX2a(1) -------At4g35610 <---------ANAC58   ---------->DOF2     <---------GLK1(1)        ===================   tgctgcttacagaggaataggcgtggagctccttcaatcgaaagaggcgatcgacctggatttcaaggcttttctgtgtctctcctctctggagaagatg  358400                      <---------At4g35610                      <---------CCA1(2)                    --------->REM1(1)           <-------TEIL          <------ZmHOX2a(2)                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         <---------ARR14(2)                     <---------ZAT14         --------->ARR11(3)                     <---------ZAT18         --------->AGP1                         --------->ZAT14         --------->ARR14(2)            <---------GLK1(2)         <---------ARR11(3)           --------->HSFC1(2)        <---------At4g35610           <---------At4g35610    ------>ZmHOX2a(1)        --------->At4g35610           --------->At4g35610 <------ZmHOX2a(2)                       <--   <-------MYC3  <---------ANAC58     <---------HSFC1(2) <---------ARR14(2)                --------->ZAT18   ------->MYC3  <---------ANAC58  <---------At4g35610   --------->ARR14(2)          --------->HSFB2a(2) ================HOX2a_HOX2a   <----------DOF2  --------->ZAT18                      <---------HSFB2a(2)   gctcatgtgcagatccatggcttcatctctctcctttagcagcttctcagtgctctctcgatcctctctcagcctctcgagtttcttcttgaaggcacta  358500               <---------HSFB2a(1)               <---------HSFC1(2)               --------->HSFC1(2)              --------->ANAC58              --------->ANAC58      --------->LBD16                                                       --------->ANAC46     --------->ANAC58                        <---------YAB1      --------------------->WRI1     --------->ANAC46                     --------->GLK1(2)      <----------DOF2     --------->ANAC58                    <---------GLK1(2)     --------->At4g35610           <-------    <---------LBD16                      <---------ARR14(2)    <---------ZAT2      --------->ANAC58   ------>ZmHOX2a(1)                 <-------TEIL   <---------At4g35610 <----------DOF2   ------>ZmHOX2a(1)  <---------ALFIN1    <---------WOX13(1) --------->ARR14(2)    <---------At4g35610 --------->ANAC58 -------At4g35610   --------->ATHB12--------->CCA1(2)       <---------At4g35610  ---------->DOF2   agctcctccgcaagagaagcatcgattgatgtctcaagattcagattctccttgagcttctctgcagctttgggcttcacgaagaaagcatcctcctttg  358600                            <----------DOF2                            <---------DAG2                           <---------ANAC58                     <---------At4g35610                     <------NtERF2                     --------->At4g35610                     --------->ZAT14                                                              ---                     <---------ZAT14                                                            -----                  --------->At4g35610                                                        --------                  --------->ZAT2                                                <---------TOE2(3) ---                  <---------At4g35610                                      --------->ATHB12  --------     <--------P<---------LBD16                                           ------->TEIL       --------- ---DOF2<---------ARR11(3) <---------ANAC58         <----------DOF2   <---------YAB1       ----------   gggtctggtagatgtttctcggctgcagtgcttttcgacctgaacatttcatttctttttgtgttttggatgatgaatgtttgagattgagagaaaagca  358700        <---------ZAT2   --------->ANAC58   --------->ANAC58 ---------->DOF2 ------>ANAC58 ----->DOF2 ->ANAC58                                                               ---------->DOF2 ------>ANAC58                       <---------HSFB2a(2)          <---------YAB1 ->ANAC58             --------->TOE2(3)                        <---------YAB1 >DAG2 --------->ANAC58              --------->HSFB2a(2)       <---------TOE2(3)                *TSS >DOF2 --------->ANAC58         <----------DOF2--------->YAB1 --------->YAB1                   ------   aagcaaagcaagcagagcaacttatctcaaaatgcttttttagaaccaaaaatgatgttcacaataagattatagaaaggagaggccatttcacacagaa  358800                                                                        ------------>CBF                       --------->ANAC58                               --------->ARR14(2)                  <----------ID1                                      <---------ARR14(2)                  --------->ANAC58                                    --------->GLK1(2)                  --------->ANAC58                                 --------->DEAR3(1)                  --------->ANAC46           ---------->DOF2      <------NtERF2            ------------>CBF           ----------->GT1            --------->RAP2.3(1)          <-----           --------->ANAC58        ---------->DOF2          ---------->DOF2                 ---------           --------->ANAC58    ---------->DOF2             <---------MYB52(1)               <--------       --------->YAB1  --------->ANAC58<----------ID1     <---------RAP2.6(3)             <---------AHL20(2) ---->DOF2 --------->ANAC46   ------------------------>ANAC81   <----------ID1           --------->AHL20(2)   agagaagaatcataagcaatacgacaagacaaaaaaagaaagagaaaaaaagaaactagccgttaagcgccgaatccaattcaaattcaaaataaatctt  358900                                                                                              -------                                                                                             <-------                               <------MYB46(1)            <-----------RAV1(2)       --------->ATHB12                               <------MYB83 --------->ANAC58                       <---------AHL20(2)                              <---------MYB46(3)        --------->TOE2(3)    <---------TOE2(3)-------                           --------->MYB111(1)  ----------->GT1             <-----------GT1  -------- -----DOF2                 --------->MYB111(2)---------->DOF2     <-------GAMYB    <---------YAB1  <- >ARR11(3)            <------ZmHOX2a(1)     --------->ANAC58     ----------->GT1  --------->AHL20(2) -ARR11(3)          --------->MYB59       --------->MYB52(1)     <---------ZAT6   <---------AHL20(2)   ttttttttgttttttgtatagttaggaagtagttggtgaacaaaaaacgaaagtaaaacctcagggactgttacaaattaacattttaattggacataat  359000                                                                                 <---------ETT(2)                                                                                 --------->ETT(2)                                                                                 --------->bZIP60(1)                                                                                 <---------TGA2(1)    <------------CBF                                                             --------->TGA2(1)   --------->ATHB12                         <------------CBF                     <---------bZIP60(1)  <---------YAB1                   <---------WOX13(1)                       <---------bZIP60(1)  --------->ICU4                  <------------CBF                      <---------WOX13(1) -->ATHB51                       --------->ATHB12          <-----------HVH21--------->bZIP60(1) --YAB1                         --------->ICU4            <---------bZIP60(1) ----------->TGA1 -->ATHB12    <------------CBF  <---------YAB1       --------->O2--------->YAB1 --------->RAP2.6(3) ->ICU4    <----------DOF2    <---------At4g35610  <---------ALFIN1  <---------YAB1 --------TOE2(3)         <------------CBF<----------DOF2  --------->bZIP60(1) ----------->HVH21------   tgagattattgggctatattgggccactattgagatgattgggctatattgggccacttgatgtcactcatatgaatgacatgacgacatttggacataa  359100                                                                                           --------->RAP2.6(2)                                                                                           --------->DEAR3(1)                                                                                           --------->RAP2.3(2)                                                                                           --------->RRTF1(2)                                                                                         ------>NtERF2                                                                                     --------->AtMYB61                                                                                ------>NtERF2                                                                                --------->ABI4(1)                                                                                <---------ATERF1(1)                                                                                <-----------HVH21                                                                               ------->GAMYB------>NtERF2                                                                               --------->ANAC58                                                                               --------->ANAC46                                                                               --------->DREB2C(2)                                                                               --------->DEAR4(1)                                                                               --------->DEAR3(1)                                                                               --------->RAP2.6(2)                                                                               --------->ANAC58            ------->GAMYB                                                     --------->MYB46(3)           --------->MYB46(3)                                                 --------->DEAR3(2)          ------>MYB83                                                       <---------ATERF1(1)          -------->P                                                         ------>NtERF2 --------->RAP2.3(3)          ------>MYB46(1)                                                   --------->AtMYB61        --------->MYB46(3)                                                  --------->ANAC46<------NtERF2        ------->GAMYB                                                       <---------ALFIN1---------        --------->AtMYB61                                                  --------->MYB46(3)       <---------MYB52(2)                                                  <---------MYB55(2)       <---------MYB55(2)                                                --------->DEAR3(1)--------->RRTF1(3)       <---------ATHB12                                                 <---------ALFIN1 <---------ATERF1(1)       --------->MYB46(3)                                              <---------ATERF1(1)--------->RAP2.3(1)       --------->DEAR3(2)                                              ------>NtERF2 --------->DEAR3(1)      ------>MYB46(1)                                                  --------->ABI4(1) --------->At4g35610      -------->P                                                      --------->AtMYB61  --------->LBD16      ------>MYB83                                                    <---------ALFIN1  --------->DEAR3(1)      --------->ANAC58                                                --------->DEAR3(1)<---------ALFIN1      --------->ANAC58                                              ------>NtERF2 --------->DEAR3(1)    *TSS<---------MYB111(1)                                         <---------ATERF1(1) --------->ANAC46    --------->AtMYB61                      --------->CCA1(2)        --------->LBD16 <---------ZAT2    <---------MYB111(1)        --------->At4g35610                  <-----------HVH21<---------ALFIN1   --------->MYB46(3)         <---------ARR11(3)                   --------->ANAC58 --------->ZAT2   --------->DEAR3(2)         --------->ARR11(3)                   --------->ANAC58------>NtERF2  ------->TEIL        ---------->DOF2    --------->CCA1(2)         --------->ANAC46<---------ATERF1(1) --->AHL20(2)     ---------->DOF2   ---------->DOF2               <---------LBD16 <---------ALFIN1   aatgaaccaaccaaccaaaaaaaagaaagggagagcttcaaagagataagatggcctctcttctctctcccgccacccccaccgccacctccgccgcatt  359200                                                                              <------NtERF2                                                                             --------->LBD16                                                                           <------NtERF2                                                                           --------->ATERF1(1)                                                                           <---------LBD16                                                                          ------>NtERF2                                                                          <---------ATERF1(1)                                                                         --------->RAP2.3(3)                                                                         ------->GAMYB                                                                         --------->RAP2.3(2)                        <---------ALFIN1                                 --------->ATERF1(2)                  <---------ARR14(2)                                     <---------ATERF1(2)                  --------->ARR14(2)                                     --------->DEAR3(1)                  <---------GLK1(2)                                     --------->DEAR3(2)                --------->LBD16                                         --------->RAP2.3(1)              <---------LBD16                                           --------->ATERF1(1)             --------->ABI4(1)                                         --------->ZAT2             ------>NtERF2                                             --------->At4g35610            --------->DREB2C(2)                             <-----------HVH21------>NtERF2            ------->GAMYB                                ----------->RAV1(2)--------->DEAR3(1)            --------->DEAR3(1)                       <---------At4g35610--------->MYB46(3)            <---------ALFIN1                         --------->At4g35610--------->ERF1           --------->DEAR3(2)                        --------->ZAT2    <---------At4g35610           --------->MYB46(3)                     ---------->DOF2      <---------ATERF1(1)          <---------ATERF1(1)                  --------->LBD16  <---------ALFIN1<-------GAMYB  <-----    ------>ZmHOX2a(1)<-----------GT1          --------->HSFB2a(2)      <---------ZAT2       --------- >LBD16  <---------ALFIN1     <---------ALFIN1<---------HSFB2a(2)   ------>ZmHOX2a(1)  --------->YAB1   tcattcctgctccaccgccggattctccactcccactcacatttcatcccagaacagcagcctgtccctcctcagccgccggggttgtatgatgagatgc  359300  Previous    Next  AGI:  At5g01910.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO48882.1) Range:  from: 357792    to: 358796    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g01920.1    Description:  STN8 (state transition 8); kinase. similar to STN7 (STT7 HOMOLOG STN7), kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT1G68830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48887.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 359104    to: 362901    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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