Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        ----------------->AGL1                                      <-----------------AGL1                       <---------GLK1(1)             --------->ATHB12     ----------->RAV1(2)            <---------AtMYB61           ----------->RAV1(1)    --------->ZAT2                 --------->ALFIN1          <---------ALFIN1        <---------ZAT2          --------->LBD16          --------->AtMYB61       --------->At4g35610   ------>ZmHOX2a(2)         --------->MYB46(3)       <---------At4g35610   <---------LBD16 <---------AHL20(2)    <---------At4g35610             <------ZmHOX2a(2) <---------YAB1        --------->GLK1(1)        --------->SPL7  <-------MYC3 ---------AHL20(1)     --------->At4g35610    --------->LBD16   ------->MYC3                        < -------->AHL20(1)     <---------ZAT2------>MYB46(1)  <---------ARR14(2)               <----------DOF2 -------->AHL20(2)     --------->ZAT2------>MYB83     --------->ARR14(2)    --------->TOE2(3)   -----   aatataattccaccaccattgggggagctctctctcacctgcctaaaccggactccgatccggacatgtggtcgtctacattagacgttcttttgaagta  331900                   <---------ANAC58           <---------TOE2(3)                   <---------ANAC46      --------->AHL20(2)                       ---------->DOF2                   <---------ANAC58   --------->AHL20(2)                   ------->MYC3              <---------ICU4         --------->AHL20(2)                    <-------MYC3              <--------ATHB1         <---------AHL20(2)          <---------AHL20(2)             <---------ATHB51    --------->AHL20(2)              --------->AHL20(2) <----------ID1 <-             <---------YAB1 --------->HSFB2a(2)         --------->AHL20(2) --------->TOE1(2)<-------- ---------YAB1--------->YAB1<---------HSFB2a(2)     <---------YAB1         <-------MYC2     --------- ------>GT1--------->YAB1 <---------ANAC46  ---------->DOF2  --------->YAB1------->MYC2 ---------->DOF2   gtataattttctacaataatagcttgttttgtagaaaaaataaataaaaaggttttgataaaatcatataaataaaacgtgctaaaaagaaaaagagaaa  332000                              --------->ZAT18                                  --------->ATHB12    --------->ANAC58       --------->ALFIN1                               <---------AHL20(2)    --------->ANAC58     <---------ANAC55(1)                          --------->At4g35610    --------->ANAC46   <---------AHL20(2)      <----------ID1       --------->YAB1             ------ ---------ID1    ----------->GT1             ---------->DOF2       <---------ATHB12            ------ --ID1       --------->ARR11(3)      ----------->GT1             --------->WOX13(1)  ---------->DOF2 -->GT1      <---------ARR11(3)    ---------->DOF2          <-------TEIL --------->AHL20(2) <------NtERF2   aacgacaaggaacaagaactagtaattaagtgtggacaaaagaaaaaaaaagacgaagaaaatgcatcaatcagataaaattgattcgaaaggaggcaag  332100                                                                                                   <-                                                                                                   ==                                                                                                   <-        ------>MYB83                                                                               --        ------>MYB46(1)                                                                            <-      <---------MYB59 ----------->RAV1(1)                                              <---------KAN4(2)      <---------MYB111(1)---------->DOF2                <-------TEIL               --------->YAB1 ---   ------>NtERF2   --------->ANAC58                  <---------ANAC58           ------>MYB83      <--  --------->DEAR3(1)  --------->RAP2.6(2)            <---------ANAC46           ------>MYB46(1)  <--- --->ANAC58        --------->ANAC46                  <---------ANAC58         <---------MYB59    <--- --->ANAC58        --------->ANAC58             --------->DEAR3(1)         <------ZmHOX2a(1)    -----   cacgacgacctactaaatagccagccacaaagcccatacttagccgagagccgagccgtgcatccattactcgagtaggacctaataagaatgtccaagt  332200            -------->ABF1            ------->MYC3            <-------MYC3            <-------MYC2            ------->MYC4           ====================================bZIP_DOF           <---------O2           <---------TGA1a   <------MYB46(1)           <--------ABF1<---------ICU4           --------->O2 --------->AHL20(2)           --------->ANAC55(2)                                    <---------AHL20(2)           --------->TGA1a   <------MYB83                         --------->AHL20(2)           <---------ANAC55(2)                                   <---------YAB1      ----------->HVH21 <--------ATHB1                         <---------ICU4 ------GAMYB<-------MYC4<---------AHL20(2)                     --------->ATHB51 ====================MYC_MYB--------->MYB59                    -------->ATHB1 --------At4g35610     --------->ICU4                          <--------HAHB4 ------->At4g35610   --------->YAB1                            --------->YAB1 -----NtERF2------->MYC2--------->ATHB51                       --------->AHL20(2)    --------->ANAC58 -------------------->TaNAC69(2)                              <---------ATHB12       --------->ANAC58 -------DEAR3(2)<---------ANAC58                              <---------ATHB51  <----------ID1 ------DEAR3(1) ----------->GT1                               --------->ICU4------------------------>ANAC81 ------RAP2.6(2)<---------ANAC46                          ------------>CBF ---------->DOF2 ---->RAP2.6(3) <---------ANAC58    ---------->DOF2 ------------>CBF    <---------TOE2(3)---------->DOF2   cggctgatttgacacgtgtcgtttaataatttggtatcgaaagacattactccctccaatttcaattattaattaagaaaagaagacaagaaaaagagag  332300                                                                           --------->HSFB2a(2)                                                                           <---------HSFB2a(2)     --                                                                       <----------DOF2       ------>ZmHOX2a(1)                                                               <-----------GT1     --------->AHL20(2)                            <---------DOF5.7(2)---------->ID1 <-----------GT1<---------At4g35610  <--               ---------->ID1     *TSS---------->ID1 <----------DOF2   <---------DAG2  <---------ICU4          <----------DOF2  <---------WRKY12    <---------CCA1(2)   <---------MYB52(1)<-----------GT1-   agagagaaactacttttgttttttttgggtaaacgtcttcgtcttcttcgtctctctttttttttttccattacttttcagaagattaaacattcctctc  332400                                                                                      <---------MYB52(1)                                                                                    --------->ANAC58                                                                                    --------->ANAC55(1)                                                                                 <-------TEIL                                                                                --------->CCA1(2)                                                                               --------->ARR14(2)        --------->MYB52(1)                       ------->GAMYB                 <---------ARR14(2)      <---------MYB52(2)                        <------------AtMYB77        --------->HSFB2a(2) <------NtERF2                             --------->YAB1           --------->At4g35610 --------->MYB52(2) ------->DEAR3(1)                     --------->ZAT18           --------->ARR14(2)  --------->ANAC58 -------LBD16                         <---------ZAT14 --------->GLK1(2)   ------>ZmHOX2a(1) -------->LBD16          <---------ZAT6   <---------YAB1        <---------ARR14(2)  --------->ANAC46<   gccggagaactaactgctcgatagatagagatagagagagagctctgataactgccattctgtctctatctgcttcctctagatacacgttagttttttt  332500                                                                                              -------                                                                                           --------->HSFB2a(1)                                                                                           <---------HSFB2a(1)                                                                                           --------->HSFC1(2)                                                                                          --------->ARR14(2)                           --------->ANAC46                                               <---------ARR14(2)                           --------->ANAC58                                               <---------KAN4(2)                      --------->ZAT14                                                    --------->GLK1(1)                      <---------ZAT18                                                --------->LBD16                   <---------ANAC58                                          <---------TOE2(3)-------          ----------->GT1  --------->ANAC58                              <---------AHL20(2)<---------HSFC1(2)         ----------->GT1 --------->ANAC46                               --------->AHL20(2)--------->GLK1(2)    ---------->DOF2<---------ANAC58         <---------YAB1             <---------YAB1<---------LBD16 ----------DOF2    <---------ANAC46    <<<<<<<<<TBF1               <----------DOF2 <---------LBD16   ttctttgaaaggggctaaatttcgtacacacgacctatttcttcttcttattggattttgtagagaaaactttattatataggtttctggggaatcttct  332600                                                    --------->ANAC58                                            <---------ANAC58                                            <---------ANAC58                                            <---------ANAC46                        ------>NtERF2   <---------MYB52(1)                  --------->MYB52(2)                        ------>NtERF2   <--- <---------ANAC46                    <---------MYB52(1)     <---------YAB1      --------->DEAR3(1) -->At4g35610                       <-------GAMYB   --------->ANAC58          ------>NtERF2      ---- ---->RAV1(2)                      --------->MYB52(2)    --------->ICU4      --------->DEAR3(1)  ----   gagccgtttagaacaaggatttaggcaaaaatatggtcagttagtttcttgtgctagcaattttgaatgggagattgcgacgacgacgactagtctctcc  332700                                                                   ----------->GT1                                                                 --------->ZAT14                                                           --------->YAB1                                                           --------->ATHB12                                                           <--------ATHB1                                                          <---------ATHB12            <---------YAB1    --------->ARR11(3)   --------->ARR11(3) ------HSFB2a(2)              <---------ARR11(3)   <---------ARR11(3) ----->HSFB2a(2)   <---------MYB46(3)          ---------->DOF2   <---------ZAT14     <---------ZAT6 -->ZmHOX2a(1)  <---------MYB46(3) <---------AHL20(2)     <---------YAB1        <---------REM1(1) ---   tcgaatcagggtttatagttgttgttgatagagatattgaattggaaccaaaagaactcaatgatagagtagtgaattttggatgtagtgtttttctcat  332800  Previous    Next  AGI:  At5g01849.1    Description:  unknown protein Range:  from: 331770    to: 331901    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g01850.1    Description:  protein kinase, putative. similar to ATN1, kinase/ protein serine/threonine/tyrosine kinase [Arabidopsis thaliana] (TAIR:AT3G27560.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G50180.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06441.1); contains InterPro domain Tyrosine-protein kinase, ATN1-like (InterPro:IPR015784); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR0110 Range:  from: 332334    to: 334467    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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