Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <-------TEIL                  <---------DEAR3(1)               ----------->HVH21               --------->DEAR3(1)              <-----------RAV1(2)             <---------At4g35610                                               <---------MYB46(3)            <---------ANAC46                                                 <---------MYB52(1)           <------NtERF2  --------->ATHB12                                 <---------MYB46(3)           --------->RAP2.3(1)                                           ------>NtERF2           --------->ATERF1(1)                                           <---------At4g35610          <---------ATERF1(1)                                         <---------At4g35610   <--------         <---------DEAR3(1)        ==================================HOX2a_HOX2a<---------ANAC58  ---       --------->ALFIN1<---------AtLEC2                               --------->At4g35610   --------- ------>ANAC58<------NtERF2        ------>ZmHOX2a(2)                  --------->ZAT14    <---------ALFIN1 ------>ANAC58--------->ATERF1(1) ===================================HOX2a_HOX2a<---------ANAC46  --- --->ZAT18<---------ORA47(2)      <------ZmHOX2a(2)           ------>ZmHOX2a(1)--------->MYB52(2) --- ----SPL7--------->ALFIN1<---------YAB1       <-----------RAV1(1)<----------DOF2<---------ANAC58  ===   acgatagaagggtggcgcagacggtgcatgatagcgatctctctctgaatgttgccattgagtcctcctttctgcagccgttgcttgctcaccactttga  314600                                                        --------->ATERF1(1)                                                        <---------ALFIN1                                                       <------NtERF2                                                       ------>NtERF2                                                      --------->RAP2.3(2)                                                      --------->RRTF1(2)                                                      --------->RAP2.3(3)                                                      --------->RAP2.6(2)                                                      --------->DEAR3(1)                                                     --------->RAP2.3(1)                                                     --------->DEAR4(2)                                                     --------->RRTF1(1)                                                     --------->ATERF1(1)                                                     --------->ORA47(2)                                                     <------NtERF2                                                    <---------ORA47(2)                                                    <---------RRTF1(1)                                                    <---------DEAR4(2)                                                    ------>NtERF2                                                    <---------ATERF1(1)                                                    <---------RAP2.3(1)                                                   <---------DEAR3(1)                                                  <---------ABI4(2)             --------->O2               <----------DOF2<---------ATERF1(1)             <---------O2           <---------ZAT18<---------RAP2.3(3)             --------->ANAC46       --------->ZAT18--------->DEAR3(1)            --------->MYB46(3)  --------->ALFIN1  --------->ATERF1(1)                             <--    ------->GAMYB             <---------ANAC46    --------->RAP2.3(1)                        -------- --DOF2 ----------->HVH21     <---------O2  --------->HSFB2a(2)                  <---------ARR14(2) --->ZmHOX2a(2)            ------>ZmHOX2a(1)<---------HSFB2a(2)                  --------->ARR14(2) < ------------>WRI1        <---------ALFIN1 <---------ANAC46                   --------->TOE2(1)   <-- ------>ANAC58  <---------DEAR3(1)  <---------ZAT14<---------RAP2.3(2)        --------->TOE1(1)   --- ------>ANAC58<-----------HVH21--------->LBD16   <---------ATERF1(1)    <---------ETT(1)     <------- =================================HOX2a_HOX2a   <---------DEAR3(1)   <-----------GT1      ---------->DOF2   tcgcaacgctctgacccgtcgctgtgctcctcccgtggtacactttcgcgaaggcgccgcatcccaccaattttccgacctcgtatttgccgaagagctg  314700                   --------->HSFB2a(1)                  --------->ARR14(2)             ------>NtERF2           <---------LBD16       <---------ARR14(2)                                               <---------YAB1       --------->ARR14(2)                                             --------->YAB1       <-----------ARR10                                              <---------ICU4      <-------GAMYB--------->GLK1(1)                                 <---------ATHB12     <---------MYB46(3)                                              <---------ATHB51     <---------DEAR3(2)                                              --------->ICU4    <---------DEAR3(1)    <---------LBD16                          --------->WOX13(1) <---------DEAR3(1)<---------GLK1(1)    -------->P              <--------ZAP1 --------->ANAC46 <---------ARR14(2)--------->ARR14(2)         <------MYB83              --------->bZIP60(1) -------ETT(2)   <------NtERF2      <-----------ARR10       <---------MYB52(1)    <---------GLK1(2) ->At4g35610 --------->LBD16--------->LBD16  --------->AHL20(2)<------MYB46(1) --------->ANAC46 ---------LBD16 --------->LBD16     <---------ARR14(2) <---------ARR14(2)   <---------ZAT14      <--- -------REM1(2)<---------ANAC46     --------->GLK1(2)  --------->GLK1(2)<---------------AtSPL8   <--- ------>ETT(2)<---------LBD16      <---------GLK1(2)   --------->ARR14(2)   --------->ZAT14      <--- --At4g35610<---------DEAR3(1)<-----------HVH21       <---------GLK1(2) <---------TOE2(3)<---------bZIP60(1)   tccacggcggttctccggcggaaattccaccgggtcagaatctaccattaaaaacagaatctgctaggtcaattatggtacacagaaactgaggtcattg  314800            --------->DEAR3(1)            <---------ANAC46          ------->GAMYB         --------->ANAC46         --------->DEAR3(1)                                                                        --    ------->TEIL                                        <---------YAB1                        ------- ------ANAC46              ---------->DOF2           <---------YAB1                           ------- ------ANAC58         ---------->DOF2              ----------->GT1        ----------->GT1    -------- ------ANAC58--------->LBD16                    --------->ALFIN1       ---------->DOF2      ---------   cgaatgaatcaacgccgtagaaaaaaaagaaaagaagtctgagagagagagtgttgttattaatagaagaagcgaaaggaaaattagtagtttgaaaagt  314900                                       <---------MYB52(1)                                    ------>ZmHOX2a(2)                                  --------->ARR11(3)                                  <---------ARR11(3)                                  <---------ARR14(2)    --------->CCA1(2)             --------->ARR14(2)                                           ------   <---------ARR11(3)             --------->AGP1                                             --------   --------->ARR11(3)  <---------CCA1(1)                                                   --------->CCA1(2)   --------->ARR11(1)  <---------RVE1(1)                                       --------->ARR14(2) -------->DOF2        <---------ARR11(3)  <---------At4g35610                  --------->ARR11(1) ---->GT1             --------->ARR11(3)  --------->At4g35610                  <---------ARR14(2) ----------------->ANAC81        <---------GLK1(1)                            <------ZmHOX2a(1)------ ->DAG2          --------->MYB52(1)<------ZmHOX2a(2)                          <---------HSFB2a(1)*TSS ->DOF2     ---------->DOF2      --------->GLK1(1)    ---------->DOF2        ----------->ARR10 ------   aaaaagatatgaacaaaagtaacagatatttagagagatctgttagcagagaaaacaaaagagagacagacaaattgggaggattcggataagagataag  315000                                                                                             <-------                                                                                       --------->TOE2(3)                                                                                 ====================                                               --------->At4g35610               <----------DOF2                                          <--------P                          --------->GLK1(2)                                   <---------ANAC58                          <---------GLK1(2)                             <-----------GT1 <------ZmHOX2a(1)               <---------ARR14(2)                         <---------AHL20(1) <------MYB46(1)                  --------->ARR14(2)  <<<< --->ANAC58              --------->AHL20(1) <------MYB83                  --------->YAB1------>ZmHOX2a(1) ->CCA1(2)          <---------ANAC55(2)<---------TOE2(3)              <---------YAB1 ---------->ID1 --->ANAC58    ----------->GT1<---------At5g28300                --------->WOX13(1) <---------------- --->ANAC46    <---------MYB46(3)  <---------ANAC58            ------------>CBF  <-------------------   ccatgctctgtatcgagttgttacatatatattactgtcttgaggtaggagatgagggtatttttgtcaattactatcagattctttttccttattttct  315100                             --------->ARR11(3)                             <---------GLK1(2)                             <---------ARR14(2)                       --------->ALFIN1                      --------->TOE1(2)                     <---------ANAC58                     <---------ANAC46                     <---------bZIP60(2)                     <---------ANAC58                        <---------AHL20(2)                     --------->O2                            --------->AHL20(2)                     <---------O2                     --------->ARR11(3)                     --------->TGA1a                  <---------ARR11(3)           ====================bZIP_DOF              <---------CCA1(2)  <----------DOF2    <---------TGA1a <---------MYB52(1)     --------->AHL20(2)  =============================bZIP_DOF             <---------ARR11(3) ----GT1<---------AHL20(2)   <---------ARR11(3)     <---------AHL20(2) ==============================bZIP_DOF             --------->ARR11(3) <<<<<TBF1 <----------DOF2   --------->ARR14(2)     --------->AHL20(1)     >>>>>>>>>TBF1   <---------ETT(2) --------ANAC81 ---------->DOF2 <-----------GT1     <---------AHL20(1)  >>>>>>>>>TBF1      --------->ZAT18 -----ANAC81    ===============bZIP_DOF       --------->TOE2(3)  ---------->DOF2       --------->ARR11(3)   tcttctttattttctttgtaaagacgtgggagattttctgttttgttttcttaatatatctattaaaaaaagaagaagaagaagatgaagatgtggacaa  315200                                 <-------GAMYB                                <-----------RAV1(1)                             <---------DEAR3(1)                           <-----------HVH21                          --------->TGA1a                          --------->O2                          <---------TGA1a        <------MYB83                          <---------O2<---------ANAC46                      <-----------HVH21     --------->ATHB12                                   <-----                 ===========================RAV  <------MYB46(1)              --------->ARR14(2)                 <-----------RAV1(2)  <---------ANAC58                        <---------ARR14(2)          <-----------GT1 ===============MYC_MYB--------->MYB59   <---------TOE2(3)<---------ICU4 ---       --------->YAB1--------->ALFIN1 <---------ANAC58    --------->LBD16     --------->KAN4(2)------   gaagttgaattagaaccatacaggtgtcccgtcgctgttgtcgtgttgatttggtatctccgagggtttaggctgtagaatatactcatttcacacatat  315300         <---------TOE1(2)         <-----------ARR10         ------->TEIL                 <---------YAB1         <---------ARR14(2)         --------->YAB1                                                ---         <---------ARR11(1)         <---------ICU4                                              <----         --------->ARR14(2)        --------->ICU4                                               <----        <---------CCA1(2)          <---------YAB1                                               <----        <---------ARR14(1)      <---------YAB1                                           <---------AHL20(2)     ---------->ID1             <---------AHL20(2)                                  <---------YAB1<-- ----ARR14(2)                  <---------AHL20(1)                                <---------YAB1------ ------>ANAC46               <---------AHL20(2)                        <---------YAB1 <---------AHL20(2) --->ARR14(2)               --------->YAB1                      ------>ZmHOX2a(1)<---------AHL20(2)   acgcttcgtcgtatcttcggctatttgctataatattattattacaagaacatataaacatgtttcctccaatattgttgaatattattattttatggtc  315400                                                  --------->MYB46(2)<---------MYB55(2)                                                  --------->MYB111(2)                                                  --------->MYB52(2)--------->MYB46(3)       ----------->GT1                            --------->MYB59  -------->P    --------->MYB52(1)                         ------------>MYB.PH3(2) ------>At4g35610                         --------->ZAT6          --------->MYB52(1) -----WRKY38(1)                      <---------ZAT2             <---------MYB52(2) -----WRKY45                         --------->ZAT2   ----------->GT1                          <----- -----WRKY12                         <---------At4g35610       --------->At4g35610          --------- -------At4g35610                    --------->At4g35610       <---------At4g35610       --------->WOX13(1) --->WRKY18(1)     <----------DOF2   <------NtERF2--------->MYB111(1)      <----------DOF2 <---------ATHB12   aactcaaaacggagaattgttctttcgactagcctaggcagctagctctagttagttagtaattcagctaaccactgctttgtttagtcatcaatcgtgg  315500  Previous    Next  AGI:  At5g01820.1    Description:  ATSR1 (SERINE/THREONINE PROTEIN KINASE 1); kinase. similar to CIPK11 (SOS3-INTERACTING PROTEIN 4), kinase [Arabidopsis thaliana] (TAIR:AT2G30360.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83248.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 313190    to: 314997    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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