Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                        <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                         <----------DOF2--------->AHL20(2)                                                  <---------ARR14(2)     <---------------AGL15                           --------->YAB1   <---------ZAT14              ------>ZmHOX2a(1) --------->AHL20(2)                          <---------YAB1    --------->ZAT14  <---------ZAT6            <---------AHL20(2)                        --------->YAB1      <---------ZAT18----------->GT1  --------->ATHB12---------  --------->DAG2     <----------DOF2      --------------->AtSPL8     --------->ARR14(2)--------->AHL20(1) ---------->DOF2    <---------DAG2     --------->ZAT14   --------->ZAT14 --------------->AGL15 ---WOX13(1)     <-----------GT1       <---------ZAT14   <---------ZAT14<-----------------AGL3 >ATHB12        <-----------GT1    --------->YAB1 --------->ARR14(2) <---------ARR14(2)<---------AHL20(1)   actaaaagcgactgatttttaaccttttataatacaaacagaacagtgtacatatccaatgtagtgaaacaaatccttttattgggaaataaaattaatt  309300     --------->YAB1   XXXXXXXXXXXXXXXXXXXX>MIR779.2                                                                 <--- --AHL20(2)               --------->TOE2(3)   --------->AHL20(2)                                 <--- -AHL20(1)                --------->TOE1(3)   <---------AHL20(2)    ---------->DOF2              <--- >AHL20(1)    --------->TOE2(3)       <---------ANAC46         ---------->DOF2                  ----- -AHL20(2)    --------->TOE1(3)  <---------ANAC58    <---------ANAC58              ---------->DOF2 <- >AHL20(2)   ----------->GT1     <---------ANAC58    <---------ANAC58    ----------->GT1    <--------   ttgtaaatgaaaatttcgttaaaacaaaccttaatgcttatcgtatatttatttagcttgaaaactaaagaaaagatgtaaaaaaaaaagaactaagttt  309400                                                                                                    -                                                                                                 <---     <---------ANAC46                                                                            ---- --------->MYB52(2)                                                            <---------YAB1 <------ ------MYB46(3)                                                              --------->ATHB12-------- ---MYB83           ---------->DOF2                                          <---------ICU4  -------- ---MYB46(1)      <---------YAB1                                            --------->ICU4   <------- ---->MYB59  --------->YAB1        <---------ZAT6                           <---------YAB1   <------- -------P   --------->ICU4       ----------->GT1                    ---------->DOF2     ----------->GT1 -TOE2(3)   ----------->TGA1<---------YAB1     <---------AHL20(2)----------->RAV1(1)  ---------->DOF2   ggttagtgtgtgtaatgacgatgaaagatgatgagaagtgataacttattttaagggctaagaacaacaacaaagttgattattagaagaaagaaataat  309500  --------->ANAC58  --------->ANAC58 --------->DAG2                                               ----------->GT1   <----------DOF2 --------->DOF2                                       ------->GAMYB           <---------At4g35610 ------AHL20(2)                                      --------->MYB46(3)     <---------RAP2.3(3) ----->AHL20(2)                                     --------->RAP2.6(3)   <---------MYB46(3)   <----- ---ICU4                                            <---------At5g28300   --------->MYB52(2)  ------- ->AHL20(2)                      <---------YAB1    --------->MYB52(1)     <------MYB83    ----------- ->ICU4                       --------->ICU4  <--------P     --------->DAG2<---------At4g35610<------ --ATHB51                   <---------At4g35610 --------->MYB52(2)      <--------P<----------DOF2   - --AHL20(2)          ---------->DOF2        ----------->GT1---------->DOF2<------MYB46(1)------------   taaaaagcaaattgcaaacagcgaaaagagagatgatgacaaaaaatggttagtaacggccaaaaggtaaacaggttggctgctctttgtttccattaaa  309600                                                                        --------->AHL20(2)                                                                       <---------YAB1                                                           <-------GAMYB--------->YAB1      <---------ICU4                                <---------ANAC46  <---------AHL20(2)     --------->ICU4    <---------ARR14(2)           <---------ANAC58  --------->AHL20(2) ----YAB1 <-----------------AGL1        --------->ARR11(3)--------->MYB52(2) -->AHL20(2)           --------->ARR14(2) --------->YAB1  <-----------RAV1(1) ---->AGL15 --------->LBD16------------>CBF         <---------ANAC58 --------->YAB1 ---AHL20(2)--------->HSFB2a(2)        <---------GLK1(1)  --------->MYB55(2)         ----------->GT1 ---------->GT1      <----------DOF2  --------->ARR11(3)  --------->MYB111(2)  <---------TOE2(3) ----->AGL3 <---------HSFB2a(2)       <---------ARR11(3)  <---------MYB46(3) ---------->DOF2   attagtaaaaattccgagaatggcattttcgcaattcatagatatcatcaacttgtgtgtttgttggccgattataatataaaggaagggaaactcttct  309700                                                                                        <---------ICU4                                                                                        --------->YAB1                                                                                       <---------YAB1                               ----------->RAV1(2)                               --------->LBD16                               --------->At4g35610             <----------DOF2 <---------LBD16                               <---------ZAT2    --------->ARR14(2)           <---------ANAC58                               --------->ZAT2    <---------ARR14(2)        <----------DOF2 --------->MYB52(1)                               <---------At4g35610             <---------DAG2 <---------ANAC58  <----            *TSS           --------->ANAC46     <----------TaMYB80 <---------ANAC58    --------->ICU4 <----------DOF2          ------>ZmHOX2a(1)    ---------->TaMYB80  <---------ANAC58  --------->YAB1   tctctttcttctcattttctctcaattcctcgcagctgaagctatttggcatatacttgtcttcgcttttcgtagctctttcgcgcataataataactga  309800                          <---------GLK1(2)                                 --------->ANAC46                          <---------ARR14(2)                           <---------ARR11(3)                      --------->At4g35610                       <---------ANAC46  <---------ARR11(3)                      <------NtERF2                    <---------GLK1(1)--------->CCA1(2)          --------->GLK1(2)                     --------->GLK1(2)    ----------->GT1         <---------GLK1(2)--------->ARR14(2)  <------ZmHOX2a(1) <---------WOX13(1)--------->ARR11(3) -----TOE2(3)         <---------At4g35610   <---------TOE2(3)----------->HVH21   <---------CCA1(2)   ggtaattgttcgattctggttcgcagcggattttgtcgatgctattgaggaatctagatttctgtgatggatagatataagacatatcttatgtctctgt  309900                  <---------ANAC58                  <---------ANAC58             --------->MYB52(2)           <---------MYB52(1)                          <---------YAB1        ------>ZmHOX2a(2)                          <---------TOE1(2)                 <----------DOF2        =======================HOX2a_HOX2a         <---------TOE2(2)         ------->TEIL --------->ARR14(2)                          <---------ANAC58               <---------CCA1(2) <---------ARR14(2)     ------>ZmHOX2a(1)    <---------ANAC58           <----------DOF2   <---------ZAT6   tccgattcgatctgtttgtttcgttcctagttcgatctacttagatttcgtcccatgtttatagctctcaatcgctttgaatcttgtctttagtgttcga  310000                                                                                        <---------AHL20(2)                                                       --------->YAB1             <-------GAMYB                <------ZmHOX2a(1)                    <---------YAB1              --------->MYB111(2)                =====================================HOX2a_HOX2a                 <---------MYB46(3)         --------->AHL20(2)          <----------DOF2 --------->ICU4             <--------P <---------ATHB12         <---------AHL20(2)<---------ARR14(2)   ------>ZmHOX2a(1)            <---------TOE2(3)     <---------ANAC46      --------->ARR14(2) ------>ZmHOX2a(2)              <---------TOE1(3)  <-----------RAV1(1)     <---------STY1(2) --------->ARR11(3)              <-----------RAV1(2)   ttttctggtgtttaattaggagcaaactagataggccttctttgttgatcctgtcattaatggtttgctctctatgtttcaggttgttgtttaatcaaga  310100                                                                                  <------ZmHOX2a(2)                                                                                 <---------ARR11(3)                                                                                 <---------GLK1(2)                                                                                 --------->AGP1                                                                                 --------->ARR11(3)                                                                                 <---------ARR14(2)                                                                                <---------At4g35610                                                                            <-----------HVH21                                                                        ------>MYB83         --------->DAG2                                                 ------>MYB46(1)        --------->ICU4                                                --------->DEAR3(1)      <---------------AGL15                                           --------->AtMYB61           <--     <-----------------AGL3                                           <---------ALFIN1       <-------     ----------------->AGL1                     --------->At4g35610  --------->ANAC46    ---------->ID1  <---------ZAT18   <-----------RAV1(2)         <---------At4g35610--------->REM1(1) ------>ZmHOX2a(1)  --------->ZAT18--------->ANAC58            ---------->DOF2       --------->ANAC46------>ZmHOX2a(2) --------->ALFIN1--------->ANAC58       ------->TEIL              --------->ZAT14--------->ARR14(2)   agagtgtgcaaaaattggaaggccagggaatgcagaaacatgtatttgaaagctgaactcaattgctctacaccaccctctcagatcctttgtccctttg  310200  Previous    Next  AGI:  At5g01810.1    Description:  CIPK15 (CBL-INTERACTING PROTEIN KINASE 15); kinase/ protein kinase. Identical to CBL-interacting serine/threonine-protein kinase 15 (CIPK15) [Arabidopsis Thaliana] (GB:P92937;GB:Q9LZW5); similar to CIPK2 (CBL-INTERACTING PROTEIN KINASE 2), kinase [Arabidopsis thaliana] (TAIR:AT5G07070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48846.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro doma Range:  from: 309712    to: 312094    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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