Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->PCF5                                           <---------PCF2                                          <------NtERF2             --------->At4g35610          --------->ATERF1(1)             <---------At4g35610          ------>NtERF2             <-------GAMYB               <---------ATERF1(1)    <---------AHL20(2)                  <---------ANAC58   --------->AHL20(2)                   <---------ANAC58                    <-----------GT1 --------->YAB1         <---------ARR11(3)<---------ATERF1(1)          --------->ARR11(3) ------>YAB1--------->MYB52(2)   <---------ZAT6      --------->ATHB12  <---------ARR11(3) ----->RAV1(1)    --------->TOE2(3)  --------->MYB46(2)             <---------WOX13(1)   caatattaaatagtcagttgcctcaatatcaacgagtgttaggcgggcccttaaatgatttgaacatttgatagattttaacaaatgttatttgggagac  289400                                                                       <---------HSFB2a(1)                                                             <---------ICU4                                                            --------->ICU4                                                         <---------AHL20(2)                                                         --------->AHL20(1)            --------->AHL20(2)                                                         --------->AHL20(2)     <-------GAMYB                                                        --------->AHL20(2)     <---------MYB46(3)                  <----------DOF2                  ----------->GT1    --------->ARR11(3)               <-----------GT1                ----------->RAV1(1)     <---------ARR11(3)           --   cacaattggagtttttttttcttttcaaatttgatttcaattctgtagcaacatggaaattaattagtatgaaatcttcgatggttgaaaaaaatactaa  289500                                                         <-------GAMYB                                                        <---------MYB46(3)         <---------ANAC58                                                     <---------MYB46(3)            <---------ANAC58                                                  <---------DEAR3(2)               <---------ANAC46                                              --------->TGA1a       --------->GLK1(2)                                              --------->ANAC46      <---------ARR11(3)      ---------                                              <---------TGA1a<---------ANAC46      <---------ANAC55(1)                   --------->GLK1(2)          =======================================bZIP_DOF              ==========================================bZIP_DOF    --------->ARR11(3)     <---------TOE1(3)       <---------AHL20(2)            ----------->HVH21  --------->MYB52(2)         --------->ANAC55(2)      --------->AHL20(2)         --------->ATHB12<---------DEAR3(1)--------->RVE1(1)--------->LBD16      <---------AHL20(2)  --------->AHL20(2) --------->SPL7  ----------->GT1    <-----------GT1 --------->GT1---------->DOF2   <---------YAB1===================MYC_MYB  <----------DOF2  <---------TOE2(3)   tttgtaaattatatggaaaagaatccaaaaaaatatgatttgacccatacgtcggtgtttgttgagtaaaaatcttcttttttttccgtgtttaaggtaa  289600                                                                       --------->YAB1               <---------ARR14(2)                                      <--------ATHB1               --------->ARR14(2)                        --------->TOE2(3)               <---------GLK1(2)                      ------>ZmHOX2a(1)---------->DOF2        <-----------HVH21                         --------->ARR14(2)  <---------ATHB12        <-----------TGA1                          <---------ARR14(2)  <---------ATHB51       --------->bZIP60(2)                        ------->TEIL --------->AHL20(2)      <---------AHL20(1)       --------->O2                              <---------CCA1(2)<---------YAB1       <---------ARR11(3)       --------->bZIP60(1)                      --------->REM1(2) ------------>CBF     --------->ARR11(3)      <------NtERF2    ----------->GT1       ------->GAMYB<---------MYB52(1)----------->RAV1(1) -->GT1<---------bZIP60(1)               --------->MYB46(3)    <---------AHL20(2)  <---------YAB1   caaaacgcgtcgtcacagatttggaccgtattaaaaacaattgacaaccgtgtatcctcccttaatttatcaataatgcaacattttgatatattcgtct  289700                                   <---------AHL20(2)                                  <---------AHL20(2)                                  --------->AHL20(2)                              <---------ATHB51                              --------->AHL20(2)                         --------->At5g28300                        --------->LBD16                                               <----------DOF2                       <---------ANAC55(2)                                         --------->ARR11(3)                ----------->GT1<---------ICU4                                      <---------ARR11(3)             --------->DAG2   <---------AHL20(2)                                  <---------GLK1(1)            ---------->DOF2   --------->ICU4                  *TSS                --------->GLK1(1) <        --------->YAB1 --------->ANAC46                  <---------MYB52(1)     <------ZmHOX2a(1)   -   ------------>CBF   <---------LBD16         <---------GLK1(2)      <---------MYB46(3)         <----   acttcatcaataagaaaagtgtaacacgggaaataattaaatagtctaaattctcttctgttttttttggtttgttcttagaggaaatctttatcttgga  289800                                              --------------->AGL15                                              <---------------AGL15                                     >>>>>>>>>ARR1                                     >>>>>>>>>ARR1                        <---------CCA1(1)                           <---------YAB1     <----------DOF2             <---------RVE1(1)           <---------HSFB2a(2)       >>>>>>>>>ARR2                       <---------ARR11(3)  --------           --------->HSFB2a(2)    <---------TOE2(2)           --------->ARR14(2)            --------- ----------DOF2    ---------->DOF2<---------TOE1(2)           <---------ARR14(2)       --------->AHL20(2) -------->TOE2(3)--------->AHL20(2)  >>>>>>>>>ARR2 ---------->DOF2       --------->ARR11(3)<---------AHL20(2) -----GLK1(2)    <---------AHL20(2) <------ZmHOX2a(1)       <---------ARR11(3)         <---------AHL20(2)   atctttaatctatctagaattaaaagtttatgctcgtaggattgtctacttttaaaagtcaacatattcgatacagatattttgtatatttatataaagt  289900                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                  ---------->DOF2                           --------->YAB1                        --------->AtMYB61                     --------->ANAC58                            ------->GAMYB      --------->LBD16--------->ANAC46                           --------->MYB46(3)  --------->ARR11(3) --------->ANAC58                  --------->AHL20(2)            --------->AHL20(2) ->DAG2             <---------LBD16                  --------->TOE2(3)          ----------->GT1 ->DOF2           <---------REM1(2)         ---------->DOF2  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)-----   cgaagaccctgaaacttatcttcacggcataataagaccaagaagaaaaagaaaacattaatttcaaccaaagcaaaacagagagaaaaaaatagagaga  290000                                               --------->ANAC58                                            --------->REM1(2)                                          <---------------AtSPL3                                          <---------------AtSPL8                                         <---------ANAC46           --------->TCP16(1)                                         <---------ANAC58           <---------PCF2                                         <---------ANAC58     --------->ALFIN1<---------At4g35610                                        <-------TEIL    --------->LBD16       --------->ZAT2                                        --------->SPL7 --------->ANAC58       <---------HSFC1(2)                                        ------->TEIL   --------->ANAC46       --------->GLK1(1)                                      <---------SPL7   --------->ANAC58       <---------ZAT2        <                                    --------------->AtSPL3 --------->ANAC58   <---------GLK1(1)     =                                   --------->At4g35610<---------LBD16    <---------LBD16      <------                                  ------------------>SPL14 --------->ANAC58   --------->At4g35610<---                                  --------->DEAR3(1)--------->ARR14(2) <---------ALFIN1     ---------                                 --------->ATERF1(1)<---------ARR14(2)<------NtERF2         ---------                 ---------->DOF2<---------At4g35610<---------GLK1(1)--------->PCF5          ---------          <---------ANAC46      --------->ZAT2 --------->ANAC58   <---------ZAT18  ------>NtERF2----- ------>GT1 --------->ALFIN1    --------->At4g35610--------->GLK1(1)--------->PCF2--------->DEAR3(1)=   gtgaatcaatttcggtggagaaagagaagaatggagcagccgtacgtgtacgcatacccgcaaggtagtggcccctcgggagctccgactccacaagccg  290100                                                                                        <---------ANAC58                                                        --------->ANAC58                <---------ANAC46                                                        --------->ANAC58       --------->ANAC58                                                        --------->ANAC46       --------->ATERF1(2)                                                       <---------LBD16         --------->ANAC58     <                                                       --------->SPL1(2)      --------->SPL7        <                                                       --------->SPL7         --------->RAP2.6(3)   -                ---------->DOF2                       --------->SPL1(1)      --------->MYB52(1)     -   --------->ALFIN1     <---------ZAT18              <---------SPL7         ------->GAMYB           =   <---------AtMYB61    --------->ZAT18             ------>ZmHOX2a(2)       =========================   <---------ZAT6       --------->ZAT14         <---------ANAC58            <---------SPL7          - ------ZmHOX2a(1)       <---------ZAT14   <---------ARR14(2)               --------->MYB46(3)      -- ====================HOX2a_HOX2a          --------->ARR11(3)             --------->MYB52(1)        -- ---LBD16     ------>ZmHOX2a(2)           --------->ARR11(1)      <---------bZIP60(1)   <---------ANAC58 ---NtERF2    ========================HOX2a_HOX2a  <------ZmHOX2a(2)     <---------DOF5.7(2)     ---- >ANAC46     <------ZmHOX2a(2)   -------->P--------->CCA1(2) <---------At4g35610 <------NtERF2 <----- >ANAC58     =========================HOX2a_HOX2a <------------------SPL14<---------------AtSPL3 ==== >ANAC58    <---------ARR14(2) ============================HOX2a_HOX2a --------->DOF5.7(2)    ------- ---->LBD16 --------->ARR14(2) ------>ZmHOX2a(1)<---------ANAC58  --------->bZIP60(1)   <---------ANAC55(2) ===================HOX2a_HOX2a===========================HOX2a_HOX2a<---------ANAC46   --------->ANAC55(2)   gaggagtggtagtggatccaaagtactgcgctccttaccctatagatatggcgatcgtacggaagatgatgtcgttaacggacggcaatttcgtgataac  290200          --------->GLK1(1)       ------->GAMYB      --------->ANAC46     --------->At4g35610    --------->MYB52(1)    <---------DOF5.7(2)   <---------WRKY12   <---------WRKY38(1)  --------->DOF5.7(2) <-----------HVH21                                                            <---------HSFB2a(2) ---------bZIP60(1)                                                           --------->HSFB2a(2) ---------TGA1a                                                          --------->HSFC1(2) -------->ANAC58                                                         <---------MYB46(3) -------->ANAC58                                   --------->ANAC46      --------->HSFB2a(1) ==============MYC_MYB                     <------MYB46(1)               <------MYB83 =========MYC_MYB                          <------MYB83                  <---------HSFB2a(1) -------->TGA1a                           --------->MYB59                <---------HSFC1(2) ------->SPL7                          --------->MYB55(2)                <------MYB46(1)        <---- ----->TEIL                            <---------MYB46(3)      <---------ANAC58           <---------MYB46(3) --->GAMYB<---------GLK1(1)          <---------MYB52(1)        <---------ANAC58           <---------ETT(2) ----------AtSPL3               --------->ARR14(2) --------->ANAC58<---------ANAC58      --------->SPL7 =========MYC_MYB               <---------ARR14(2) --------->ANAC58<---------ANAC58     <---------MYB52(1) -->MYB52(1)              --------->ALFIN1<---------AtMYB61  --------->ARR11(3)      <---------LBD16   ggacgtcaacggaaacctgctgttcaaggtgaaggaaccggtgtttggtctccacgacaagagggtcttgctggatggttctggtactccggtcgtcact  290300  Previous    Next  AGI:  At5g01750.1    Description:  Identical to Uncharacterized protein At5g01750 [Arabidopsis Thaliana] (GB:Q9LZX1;GB:Q8LEK9); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48825.1); contains InterPro domain Protein of unknown function DUF567 (InterPro:IPR007612) Range:  from: 289762    to: 290911    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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