Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              -------                                                                                              -------                                                                                          --------->ANAC46                                                                     ----------->GT1      --------->ANAC58                                                                ---------->DOF2           --------->ANAC58                                                              --------------->AGL15      --------->ZAT14                                                              <---------------AGL15      <---------ZAT18                                                             ----------------->AGL3    --------->At4g35610                                ----------->RAV1(1)          ----------------->AGL2    <---------At4g35610 ------>DOF2       <---------WOX13(1)  <---------TOE2(3)     ----------------->AGL1  <---------ICU4 --ID1 ---------->DOF2         <----------ID1                ----------------->AG   --------->At4g35610   aaagaacataaatgccaagggattgattccatagcgacatagaggtttcattagaattagataaccaaaagaagaaaaatcatctcatcagcacacaaga  277200                    <---------RVE1(1)                   <---------TOE2(3)                   <---------ARR11(3)                   <---------TOE1(3)                   --------->ARR11(3)                  <-----------RAV1(2)       --------->ZAT14                        ------>MYB46(1)       <---------ZAT14    --------->ANAC58    ------>MYB83 -->ANAC58         <---------GLK1(2)        <---------ALFIN1 -->ANAC58       <---------TOE2(3)  ---------->DOF2   <-------TEIL -->ANAC46--------->ANAC46--------->ANAC58  --------->AtMYB61          <-------TEIL   aacttgaactacaccgaataagatttttaagcaaaaaacaaagagaccaccctagattcaggttttctctagattcagagtatatagcatcgaaattcaa  277300        --------->TOE1(3)                             <---------ARR14(2)       --------->HSFB2a(1)                         <---------ANAC46       <---------HSFB2a(1)                         ----------->GT1       --------->HSFC1(2)               ------>ZmHOX2a(1)       <---------HSFC1(2)              --------->TOE2(3)     <---------ARR14(2)                --------------->AGL15     --------->ARR14(2)                <---------------AGL15  --------->ANAC58                    <-----------------AGL1  --------->ANAC58                    ----------------->AGL1  --------->ANAC55(1)         --------->At5g28300 <------MYB83  --------->ANAC46           ----------->GT1      <------MYB46(1) --------->LBD16           <---------ZAT14      <--------P                --------->AHL20(2) <---------LBD16           --------->ZAT14 --------->MYB52(1)  <---------MYB59xxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ttccacggaaccttcagtgtcccattctctacagtaaaattcctcaaacggtagggtatattggaccgaaattgaattaaaaaaaaaaaaaaaaaaaaca  277400                                                                            ------>ZmHOX2a(2)                                                                            =========================                                  --------->TGA1a                          ==========================                                  ========================================bZIP_DOF         <---------ARR14(2)                                  <---------O2        <---------ZAT2       =============HOX2a_HOX2a                       <------NtERF2                  --------->At4g35610  <------ZmHOX2a(2)                     <---------ANAC46     ------>MYB46(1)                 <---------ARR11(3)                    <------NtERF2 <---------TGA1a     <---------At4g35610 <---------ARR14(3)                   <---------ATERF1(1)    ------>MYB83<---------HSFB2a(1) --------->ARR14(3)  <------MYB83                <---------At4g35610      --------->ANAC58                 <---------ARR14(2)  <------MYB46(1)                --------->ZAT2    --------->O2        --------->HSFC1(2)  --------->ARR14(2) <-------                ----------->RAV1(2)      --------->ANAC58  --------->HSFB2a(2)         <---------LBD16                --------->At4g35610      --------->ANAC46  <---------HSFB2a(2)   ------>ZmHOX2a(1)  <                <---------ZAT2   <------NtERF2        <---------HSFC1(2)  --------->ARR11(3)<--------            <------NtERF2       ------>NtERF2 --------->AtLEC2 ---------->DOF2------>ZmHOX2a(1)     <          <---------ETT(2)     --------->DEAR3(1)     --------->ZAT2     <------ZmHOX2a(1) --------->ARR14(2)          --------->RAP2.6(2) --------->RAP2.3(1)  <---------At4g35610<-----------RAV1(2) <------NtERF2   tactcagagaggtcgccaagctggcgcaaaacgccgacgagaccagccatggaagcagcttcgagcaaagcttcaggatcctccttatcggcggattggt  277500                                <---------ARR14(2)                                --------->ARR14(2)                                ------->TEIL                                <---------ARR11(1)                                --------->GLK1(2)                               <---------CCA1(2)                             --------------->AGL15                             <---------------AGL15                             <---------ANAC58                             <---------ANAC58                             <---------ANAC55(2)                             <---------ANAC46                   <---------RAP2.6(3)                  --------->RAP2.6(2)                 --------------->AtSPL8             ---------->DOF2 <---------ANAC55(1)            <----------CDC5  --------->ANAC55(2)            <---------MYB52(1) <---------ARR14(1)       <---------ARR14(2)   <-----------------AGL2       --------->ARR14(2)   <-----------------AGL1     ------>ZmHOX2a(1)      ----------------->AGL1 ===========HOX2a_HOX2a     ----------------->AG ===========HOX2a_HOX2a     ----------------->AGL2                                  <---------MYB52(1) --AtMYB61 --------->At4g35610--------->LBD16 <<<<<<<<<WRKY18           <---------TOE2(3) ---------GLK1(1)--------------->AtSPL3     <-----------HVH21          ---------->DOF2    --------->TOE2(3) -WOX13(1)--------->ANAC46  <-----------------AGL3               <---------ATHB12  --------->TOE1(3) ---------At4g35610<---------SPL7     <---------CCA1(2)      ------------>CBF      --------->TOE2(3)   agagctccttatccgctaagccgtactcgttccgtatctggtatctcgtcaatgccattgtgctccaatcgattaaagtagaaacccttaattcttaaaa  277600                                       --------->DEAR3(1)                                       --------->DREB2C(2)                                          <                                       ------->GAMYB                                              <--                                      --------->DEAR3(2)                                         ----                                      --------->MYB46(3)                            <---------ARR11(3)                            <---------ZAT14       <-----------TGA1                  --------->ARR11(3)                            <---------ZAT18       <-----------HVH21--------->ARR11(3)         <------                            --------->ZAT14  ---------->DOF2<XXXXXXXXXXXXXXXXXXXXMIR1886.3   <-------                      --------->GLK1(2)--------->RAP2.6(2)---------->DOF2           <---------GLK1(2)              --------->At4g35610    ------->TEIL--------->ANAC46  <---------ARR11(3)    --------->AHL20(2)            <-----------RAV1(2)     --------->ARR14(2) <------ZmHOX2a(1)     <----------DOF2 <-------           --------->At4g35610      --------->MYB52(1)--------->At4g35610   --------->TOE2(3)--------   ---------->DOF2>>>>>>>>>TBF1   <---------MYB52(2)<-----------RAV1(2)  <-----------GT1 <---------AHL20(2)   acaaaaaaagagcatcagaagaagaaactgtgcagaacgaaccgccaaaacgcgtcaggagaaagatgaaatcttttacctttatagatttttaattaat  277700                                                                                    ------>NtERF2                                     ----------->HVH21                              --------->LBD16                                   --------->ANAC55(2)                            ----------------->AGL1                                   <---------ANAC55(2)                            <---------LBD16                                   <---------ANAC58          --------->YAB1    <--------P      ------>NtERF2         <-----------GT1                  <---------ICU4   <-------GAMYB -----------GT1             --------->MYB52(1)              <---------YAB1   <---------MYB46(3) -------AHL20(2)       --------->AHL20(2)                 --------->YAB1    --------->ALFIN1    <---- ----->YAB1            <---------AHL20(2)  <-------TEIL  <---------YAB1     <---------AtMYB61   ----- ---AHL20(2)         <-----------TBP--------->LBD16  --------->At5g28300  <---------MYB52(1)    <---- --AHL20(2)   <---------MYB46(3)   <---------ANAC58 ----------->GT1       --------->ALFIN1   -------- --AHL20(1)  <---------AtMYB61  <-----------HVH21--------->MYB52(1)  <---------ALFIN1   ------->MYC3 ->AHL20(2)  --------->ALFIN1  ------->GAMYB   --------->MYB46(3)   ----------->HVH21   <-------MYC3   tttaacgacgcgagagtggtggaatttatataacggtccgtgacattcatccaacggttataatcatcgcctcaccgtgtggttgccgcatgtgatcaga  277800               <---------AHL20(2)              --------->AHL20(1)           --------->AHL20(1)           --------->AHL20(2)           <---------AHL20(2)          <---------AHL20(2)          --------->AHL20(2)         <---------AHL20(1)                                                                      ----   ----------->GT1                                                                              ----- <-----------RAV1(2)                                              ---------->DOF2           --------- -----ARR14(2)<---------AHL20(2)                             --------->AtLEC2       <---------ANAC46 ---->ARR14(2)<---------AHL20(1)                         <---------YAB1             <---------ANAC58 -----GLK1(2) --------->AHL20(2)  ---------->DOF2 <---------MYB52(1)                <---------ANAC58 ->YAB1 --------->YAB1  --------->LBD16----------->GT1  <-----------GT1         <----------DOF2 <----   acctcaggtaaaataatttattcaaccggtgaacatgaaagtagttaaaaccgttgattatccatgcttaaagatggacaaactttgcttagaatcataa  277900        -------->ATHB1        --------->ATHB51        <---------ICU4        --------->ATHB12        -------->HAHB4       <---------YAB1       <---------ATHB51     --------->YAB1     <---------ICU4    <---------YAB1    --------->ICU4                                           <-------GAMYB   <---------AHL20(2)                                       <---------MYB46(3)   --------->AHL20(2)                                      <---------TOE2(3)   <---------AHL20(1)  --------->AHL20(1)             <---------MYB46(3)  --------->YAB1       <---------AHL20(1)       <---------REM1(2) <---------YAB1        <---------AHL20(2)     <---------ETT(2) ------->GT1          --------->AHL20(2)      --------->ETT(2)    <---------GLK1(1)               <-- ---->DAG2         --------->WOX13(1)  --------->ARR11(3)  <---------AtMYB61                     ---- >YAB1 --------->ICU4 --------->YAB1   --------->AHL20(1)<---------MYB46(3)                  <------- -----TOE2(3)    <---------ATHB12     --------->YAB1 --------->ALFIN1   <---------MYB52(1)<----------DOF2   ggtattataattattgcaaatcaattatattgtactacaagtatattgtctacaagtggttgtggttgaaatcagttagtgtattcaacctgcttttgat  278000                                    <---------YAB1                                   --------->AHL20(1)                                   <---------AHL20(2)                                   --------->AHL20(2)                                   <---------AHL20(1)                                  --------->YAB1                                  <---------ICU4                                 <---------YAB1                                                <-----                              <---------AHL20(2)                                              <------          <-----------HVH21   <---------YAB1                                                  -------      <---------ALFIN1        --------->AHL20(2)                                             <-------     --------->MYB46(3)      <---------AHL20(2)      --------->ATHB12<---------ZAT6        <---------AHL20(2) -----GAMYB              <---------AHL20(2)         <---------YAB1 --------->YAB1          --------->AHL20(2) -->ZmHOX2a(2)          <---------AHL20(2)<----------DOF2         <---------ATHB12     <---------AHL20(2) --YAB1  --------->AtMYB61   --------->AHL20(2)     <---------AHL20(2)                 --------->AHL20(2)   cgttacatccaccttcacctaagttttttattttaattataattctttttttatattattgactaccaatagtgatcaaatagtgggaattatatatata  278100  Previous    Next  AGI:  At5g01730.1    Description:  WAVE3. Identical to Protein SCAR4 (SCAR4) [Arabidopsis Thaliana] (GB:Q5XPJ6;GB:Q9LCZ7); similar to ITB1 (IRREGULAR TRICHOME BRANCH1) [Arabidopsis thaliana] (TAIR:AT2G38440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48814.1) Range:  from: 272829    to: 277558    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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