Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------ANAC46        <------MYB83        <------MYB46(1)        <---------ANAC58        <---------ANAC46                                            =================================       --------->MYB111(1)                                          <---------ANAC46       --------->MYB46(2)                                           <---------ANAC58 --------ANAC58                                                     <---------ANAC58 --------ANAC58                                                     --------------->AGL15      <----- --------ANAC46                                                     <---------------AGL15      ------ >ZmHOX2a(2)           <------MYB83                                <-----------------AGL1     ------- --AGP1<---------MYB46(3)   <---------TOE1(3)                      ----------------->AGL1     <------ ->ARR11(3)            <---------MYB46(3)                          ================================== ->AGP1<---------AtMYB61    --------->MYB59        <---------At4g35610                        ------- --ARR11(3)            <------MYB46(1)       <---------ARR11(3)    <-----------------AG       <------ --ARR14(2)           <---------AtMYB61  ---------->DOF2       <---------At4g35610            ------- ->ARR14(2)     --------->ATHB12<-----------HVH21  --------->At4g35610          --------->ICU4------- ->ARR10<---------ANAC58    <---------TOE2(3)--------->ARR11(3)--------->At4g35610           >>>>>>>>   gtcttgtgtttggtgtattcatgggtggtttaggtttcacagcaaaagatgttagcagacatgtcaacttccttgtttggaaatgatcaagctcaaacca  247700            <---------ZAT14                                                                         -  ----------->GT1                                                                                  -- ==========MADS_MADS                                                                               -- ----------AGL15                                                                                <---- --------->AGL15                                                                          --------->TOE1(2) ---------->AGL3                                                                         --------->HSFB2a(1) -----------AGL2                                          <---------MYB46(3)             <---------HSFB2a(1) ===========MADS_MADS --------->At4g35610                --------->ALFIN1          <---------WOX13(1) ---------->AGL2   --------->ICU4                     --------->DAG2             --------->ATHB12  -- -----------AGL3 <---------ICU4                  --------->LBD16             --------->ZAT6     ----- ---------->AG----------->GT1                    <---------LBD16           ------>MYB46(1)--------->TOE2(2) ---------->AGL1--------->ICU4                   ------>ZmHOX2a(1)         ------>MYB83  <---------HSFC1(2) >>MYB80    --------->ZAT14      <---------TOE1(2)   ---------->DOF2     <---------MYB59 --------->HSFC1(2)   aaaatggtgagaactgtagtaattatctgcaattgcaggtttgaatttttcctcggaaagtggttcacactgtaacctaacactgattggaacctgcgaa  247800                                                    <------MYB46(1)                                                    <------MYB83         --------->AtMYB61                        <--------P        --------->ZAT18                      ---------->DOF2   ---------->DOF2                       <---------HSFB2a(2) -------->At5g28300                      --------->HSFB2a(2) ------->TOE2(3)                   <---------------AGL15 ------->TOE1(3)                   --------------->AGL15               --------->LBD16 -----ARR14(2)                    <-----------------AGL2               ------>ZmHOX2a(1)       ------ --------->GT1                    <-----------------AGL1             ----------->RAV1(2)    <-------- ---->ARR14(2)                  <-----------GT1--------->DAG2       ------>NtERF2 --------->ANAC55(2)   accgtaaaagaccactgcttatttcatgaaatttatactgcttatggaaaaggttggcaagggataatgcctcctgaaaaccatatgtaatccaatgaac  247900                                                          <---------TOE2(3)                                                      <---------GLK1(1)                                                      --------->CCA1(2)                                                     --------->ARR14(2)                                                     <---------ARR14(2)              --------->ANAC58                  ---------->DOF2                    <---------ARR11(3)              --------->ANAC58                <---------YAB1                      <------ZmHOX2a(1)              <-------TEIL ->TEIL       --------->YAB1                    <---------ZAT14           <-----------HVH21        -- -ATHB12     <-------TEIL      <-----------HVH21--------->ZAT14         --------->MYB46(3)    -------   tcatagaaacacatattcatgaaagtgatcaaatgtcactctggtacctgtgcaggatatgaggttctctcagaaccatcagaggtccagccataagggt  248000                    --------->ZAT2                    <---------ZAT2                   --------->ANAC46                  ------->GAMYB                 --------->MYB46(3)        ----------->HVH21                          --------->YAB1        --------->WRKY38(1)                       <------ZmHOX2a(2)        --------->WRKY12                    --------->ZAT14      <---------ZAT2<---------At4g35610     --------->ZAT18                                        --      <---------At4g35610                  --------->ALFIN1                                        --      --------->At4g35610--------->TOE2(3)<---------------AtSPL8                                  ---      --------->ZAT2--------->At4g35610   <---------------AtSPL3 ----------->GT1             -------- ------->ICU4 --------->MYB46(3)         <---------ANAC46----------->GT1                --------->WOX13(1) ---->GT1   --------->AtMYB61  ---------->DOF2--------->SPL7   ---------->DOF2       <---------ARR11(3)   caaaattgagctgaccacaaccagcagcctcaaaaatgccatgaagtgtacgatcagaatagttgaaaagaaacaatggcaaaccaatatcaatcttctg  248100                                         --------->At4g35610                                         <---------LBD16  --------->ARR14(2) ------->ANAC58                          <---------At4g35610<-------TEIL ------->ANAC58             <-----------HVH21--------->ARR14(2)       <------------CBF ---->TEIL <---------MYB46(3) <<<<<<<<<WRKY18<---------ARR14(2)      <---------ICU4 ->At4g35610       ----------->GT1   <-----------HVH21    <---------ARR14(2)                    -----   cacgtatggatagtggttagagggtaaacctgtcaaaaccatcagcggattcaagaagcatatacatacaaacattgcgaaatagagtttagaaacaaaa  248200            --------->ANAC58                                                     --------->ANAC58            --------->ANAC58                                         --------->At4g35610            --------->ANAC46       ---------->DOF2         <-------TEIL--------->ANAC58           --------->SPL7  ---------->DOF2              --------->At4g35610      --------->ANAC58 ---      ------->GAMYB     --------->ANAC58     --------->At4g35610  <---------At4g35610             ---   ----------->RAV1(1)  --------->ANAC58     <---------At4g35610  --------->At4g35610          <----- ---->AHL20(2)------------>CBF    --------->YAB1    --------->MYB52(1) --------->ANAC58   ---------->DOF2   aaatgcaacagcatacgacaatgagcaagcaaagaatcaaagtagacagcaaacaaacagctacattcagcagaagcaaaaacaagcatgggaaaagaat  248300                                                                   ---------->DOF2                       --------->MYB52(1)                       ------>NtERF2                    <---                      --------->MYB46(3)                     --------->ZAT18                    <----                    ------>MYB83                             <---------ZAT18              <----------DOF2                    ------>MYB46(1)                          <---------ZAT14              <---------DAG2 ------>ANAC58    <---------MYB46(2)                    <---------YAB1                --------->WRKY12 ------>ANAC58    --------->MYB46(3)       <----------DOF2   --------->ZAT14  <---------ALFIN1 <----- ----KAN4(2)     --------->ANAC46    <-------TEIL      --------->TOE2(3)   --------->ANAC46    <-----   aagctattcaagaagactcaccaaacaactgtttcgacatacattctttgatggtattcttagtgcagccaaagacaacaccacctagttgacttttcgt  248400                                                  <---------ANAC46                                                 ----------->GT1                                               <---------WOX13(1)                                             --------->ATHB12                                        <<<<<<<GRF7   ---------->DOF2         <---------At5g28300                                      ------>ZmHOX2a(1)                  <------ZmHOX2a(1) --------RAV1(2)                    ----------->RAV1(2)              ---------->DOF2 -----MYB52(1)                      <---------ICU4----------->GT1  <---------YAB1            <------- ------HVH21              <----------DOF2 <------------CBF     <---------GLK1(2)  ----------->GT1 ------TGA1           <---------ALFIN1----------->HVH21    ---------->DOF2   <-----------GT1 --------   caggtttctgaaggaaaactttcccctcctttgagccatcctgacattgattgggtaaaaggaaagaatatcaaaggatttacagtgtaacaacaaatcc  248500                                                                                <-----------GT1                                                                           ----------->GT1         <--------ATHB1                                                  <---------TOE1(2)         <------------ATHB5                                              --------->SPL7         -------->ATHB1                                                 <---------SPL1(1)         <---------ICU4                                                <---------SPL7         --------->ATHB12                                             <---------ANAC58        <---------ATHB12                                              <---------ANAC58        <---------YAB1                       --------->ANAC58        <---------------AtSPL3        <---------ATHB51                     --------->ANAC58        <---------------AtSPL8        --------->ICU4                     <---------ICU4            --------------->AtSPL3     ------------>ATHB5                    --------->YAB1       <---------ARR14(2)                  <  ------>ZmHOX2a(1)              --------->ANAC58               --------->ARR14(2)             ------ --ARR14(2)            <---------YAB1     <---------ATHB12      <---------GLK1(2)           --------- ->ARR14(2)<---------WOX13(1)    --------->ANAC58               <---------ARR11(3)          ---------   agtccttccaatgattgaaacgggtcttattgctcaagcatgtaatcaagacagacacagtctccagatttttcgtacggttttactaactagacaacag  248600  Previous    Next  AGI:  At5g01660.1    Description:  kelch repeat-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48794.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Development and cell death (InterPro:IPR013989); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 244501    to: 248142    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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