Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                    --------->GLK1(1)                                                                                    <---------GLK1(1)                             --------->AHL20(2)       ----------->GT1              <---------ARR14(2)           <---------HSFB2a(2)         <---------ARR14(2)                          --------->ARR14(2)           --------->HSFB2a(2)  ---------->DOF2      <---------------AtSPL8      --------->LBD16         <---------ANAC46   --------->AHL20(2)       --------------->AtSPL8     --------->HSFB2a(2)   <------ZmHOX2a(1)  --------->At5g28300    --------->MYB52(1)                 <---------HSFB2a(2) -----------RAV1(2)  ----------->GT1   --------->ARR14(2)                      <---------LBD16   ggccaggaatggcctagaaatcgtggtaaaataaaaaagaagaaccccaacgaagattgtacaaataagtcaagagaagactccggaaatgtgaaccact  243700                           <---------ANAC58                           <---------ANAC58       <-------MYC3                                      -                     <---------AHL20(2)           ------->MYC3                                     --                    --------->AHL20(2)          ------->TEIL                 <---------MYB52(1)    <-    --------->MYB52(1)     <---------ANAC46  <---------YAB1      <<<<<<<<<TAC1           <------ZmHOX2a(1) >MYB46(3)      ----------->GT1              --------->AtLEC2  <---------ALFIN1       --------->YAB1-   agaatagaacggagcaacgagataaaattgcttagggtttctatatcatgcatgtgaagaaaacaacactcgaatcgctgttattcaataaggagaagaa  243800                              <-----------ARR10                              <---------ARR14(2)                        --------->ANAC58                        --------->ANAC46                        --------->ANAC58                    --------->ANAC58        <----------ID1                             ----------->GT1           ---------->DOF2   <---------CCA1(2)                                <---------MYB52(2) ------->HAHB4      --------->ANAC46 <------ZmHOX2a(1)                      --------->MYB52(1) ------->ICU4       --------->ANAC58--------->LBD16 ----------->GT1      --------->ANAC58 --------YAB1   --------->ANAC58  <---------LBD16 --------->GLK1(2)      --------->ANAC58 -------->ATHB12--------->ANAC58  <-----------RAV1(2)                  --------->MYB52(1)   aatgattaagagataaagacgcacacaaggcaaatctcaggagaaaacgaagaatcgaaacaaaattcgaacagaacgaaacgaactagaggttaaatcg  243900                                                                                                  <--                                                                                                 <---                                                                                            <--------                                                                                         <------NtERF2                                                                                         --------->WRKY18(1)                                                                                        ------>NtERF2                                                                                        <---------RAP2.6(3)                                                                                        <-----------HVH21                                                        <---------At4g35610            --------->RAP2.6(2)                                                        <---------HSFB2a(1)            --------->RAP2.3(2)                                                        <---------HSFC1(2)             --------->RAP2.3(3)                                                        --------->At4g35610            --------->DEAR3(1)                                                        --------->HSFB2a(1)           --------->RAP2.3(1)                                                        --------->HSFC1(2)            <------NtERF2                                                --------->ALFIN1                     <---------ATERF1(1)               <---------ANAC58  <---------ATHB12<---------MYB46(3)                  ------>NtERF2<--               --------->ANAC55(2)           <---------DEAR3(1)                     <---------DEAR3(1)               <---------ANAC58<---------At4g35610   <------ZmHOX2a(1)              --------->ANAC46               <---------ANAC55(2)        ----------->HVH21                         --------->DEAR3(1)      --------->DAG2     <---------ANAC58--------->HSFB2a(2)               <---------ARR11(3)  ------     ---------->DOF2     <---------ANAC58<---------HSFB2a(2)  --------->LBD16  ------->TEIL <--------   agagagaaaaagggattacgttctcaggcttgccgatgattttcgcgacggtggaggaagcttccgagagaatggaagatgtatcgacgccgtcaaggtt  244000   <------MYB46(1)   <------MYB83   <---------MYB46(3)                                            --------->AHL20(2)  <---------DEAR3(1)                                             <---------AHL20(2)  <---------AtMYB61  --------->bZIP60(2)                   ------>NtERF2 -------TOE1(3)      --------->ANAC58                     --------->ANAC46 ------DOF5.7(2)     --------->ANAC46                     --------->ANAC58 -TOE2(3)    --------->ALFIN1      <<<<<<<<<TBF1       ----------->HVH21   ---------->DOF2 -------TOE2(3)      --------->ANAC58       ---------->ID1--------->ANAC58--------->WRKY18(1)       - --->DOF5.7(2)  <---------------AtSPL3<<<<<<<<<TBF1--------->ZAT6<---------AHL20(1)               --- -TOE1(3) <---------AtMYB61     <<<<<<<<<TBF1    <-----------HVH21<---------AHL20(2)---------->DOF2 -   aacgttggtggagaggttgaggcacggcattttcttcttcttcttcgtctctatcactcgacgccaattttttttagtcaagcggataaagagagtaaga  244100           <-----------GT1          <-----------GT1        --------->HSFC1(2)        *TSS        <---------HSFB2a(1)                                                               --------->GLK1(2)        <---------HSFC1(2)                                                               --------->ARR14(2)        --------->HSFB2a(1)                                                              <---------ARR14(2)       <---------KAN4(2)------>ZmHOX2a(1)                                                <---------GLK1(2)     <------ZmHOX2a(1) --------->TOE2(3)                           <---------ANAC58      <---------ARR11(3)   --------->LBD16     --------->TOE1(3)                           <---------ANAC58      --------->ARR11(3)  <---------LBD16    <---------YAB1                               <---------TOE2(3)     <---------HSFB2a(1) ----->MYB83        <-----------GT1<---------AHL20(2)            <-----------GT1        <---------HSFC1(2) ------>AtMYB61 <----------DOF2<----------DOF2      --------->ANAC58                    --------->HSFC1(2) ----->MYB46(1)<---------DAG2 --------->TOE2(3)     --------->ANAC58                    --------->HSFB2a(1)   ccacccaggaattttccccttttatccttaaaccttttttattcgcttaggcccaagcccatcgtttttacgtttgcattctcgtttcgaagattctttc  244200                                                                                         ----------->GT1                                                                  --------->At4g35610 ===============                                                                  <------NtERF2       <------ZmHOX2a(1)                                                                  <---------At4g35610 ===============                                                                --------->ZAT18    <-----------RAV1(2)                                                                <---------ZAT18    <---------LBD16                                                           ---------->DOF2      --------->ZAT18                                                         <---------YAB1      <---------ANAC58    <---      --------->At4g35610                           ----------->GT1          <---------ANAC58   -----   aaacgctctgatgaagtgattttggattattttgtttagaaatgggccttaatctagttataaaagcccgctcaaatttgagtgcccaggaacgtttata  244300         <---------ETT(2)     ------>ZmHOX2a(2)    <---------GLK1(1)              <---------MYB46(3)    <------ZmHOX2a(2)            <---------WOX13(1)    <<<<<<<<<GATA-1            ------>MYB46(1)    <<<<<<<<<GATA-4            ------>MYB83    <<<<<<<<<GATA-3          <---------MYB59    <<<<<<<<<GATA-2          <---------MYB111(1)   <---------ARR11(3)        <---------MYB46(2)   <---------AGP1           --------->ANAC58           <---------DAG2   --------->ARR11(3)       --------->ANAC58           <----------DOF2 ===========HOX2a_HOX2a    ------->TEIL             <-----------GT1 ==========HOX2a_HOX2a  --------->ANAC58            ---------->ID1                    <---------ANAC58 ------AHL20(2)         --------->ANAC58         --------------->AtSPL8               <---------ANAC58 ---->AHL20(2)         --------->SPL7  --------->MYB52(2)  <---------YAB1   <-----------GT1  --------   aaatagatctctcgacctagacccgaacgcacctaattggttagatgtttttttgtacttttttatagcaaatcgatatttccattttgcttctacttca  244400                                                                ------>NtERF2                                                                ----------->RAV1(1)                                       <---------CCA1(2)       --------->RAP2.6(2)                                     <---------ANAC58    <---------ANAC58                      --------->YAB1 <---------ANAC58    <---------ANAC58  --------->MYB52(1)          <----------DOF2       ---------->DOF2          <---------bZIP60(2)   --------->At4g35610 ------->AGL15 --------->LBD16 ------>ZmHOX2a(1)    --------->YAB1--------->AtMYB61 ---------->DOF2   tagagggaaactctttccccaaaatcaaaactcctaaaggcttatctctgtctctcatgacttggccaccaaaaaaacaacagcttcaaagtttccccat  244500                              ------>MYB46(1)                              --------->MYB52(1)                              -------->P                  <---------ALFIN1          --------->LBD16     ------>MYB83         <-------MYC2                  --------->ANAC46         --------->DEAR3(1)  --------->MYB55(1)    <-------MYC3            ---------->DOF2        <------NtERF2       --------->DEAR3(1)     ------->MYC2         --------->TOE2(3)       ------>NtERF2     --------->ANAC58          ------->MYC3  <---------ALFIN1--------->ANAC58      --------->DEAR3(1) --------->ANAC58         --------->ANAC58      --------->TOE1(3)   --------->ANAC58     >>>>>>>>>MYB2             --------->ANAC58    ------>MYB83   --------->ANAC46 --------->ANAC58             <-------TEIL  <-----------HVH21 --------->ANAC58   --------->ANAC58 --------->ANAC58    <------ZmHOX2a(1) <-----------GT1------>ZmHOX2a(1) ---------->DOF2  ---------->DOF2  <------ZmHOX2a(2)   <-----------GT1------>MYB46(1)             <--   ttacaaagccaccgcagatagaaagcaacgcctaccgatcgaggaagaaggcacgtttttccacccttcaccttccttaaaacactcaacctgcaaacac  244600  Previous    Next  AGI:  At5g01650.1    Description:  macrophage migration inhibitory factor family protein / MIF family protein. similar to macrophage migration inhibitory factor family protein / MIF family protein [Arabidopsis thaliana] (TAIR:AT5G57170.1); similar to unknown [Populus trichocarpa] (GB:ABK94097.1); contains InterPro domain Tautomerase (InterPro:IPR014347); contains InterPro domain Macrophage migration inhibitory factor (InterPro:IPR001398) Range:  from: 242547    to: 244108    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g01660.1    Description:  kelch repeat-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48794.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Development and cell death (InterPro:IPR013989); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 244501    to: 248142    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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