Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <------MYB46(1)                                                                                  <--------ATHB1                                                                                  --------->ATHB12                                                                                 --------->ICU4                                                                           --------->At4g35610                   <------NtERF2                                           <---------At4g35610                  <------NtERF2                             --------->ARR11(3)   <---------ATHB12      --------->TOE2(3)               <----------DOF2   ---------->DOF2    --------->ZAT18        <-- ---------ICU4    --------->LBD16 <------------------------ANAC81        <---------ZAT18          --- -------->YAB1   <---------DEAR3(1)---------->ID1    --------->YAB1   <---------ANAC58 <------MYB83 --------YAB1   <---------LBD16<----------DOF2<-----------GT1         <---------ANAC58--------->MYB59   gatcataacttcaatatggccggagcaattctactttgttcttttttttttccaattgtaaagaactactattcgtgtgctcaatgatttggtcttacaa  232200                                                                                             --------                                                                                             --------                                                                                      --------->YAB1                                                               --------->DAG2         <---------ICU4               <---------AHL20(2)                        --------------->AGL15        <--------HAHB4        ----------->GT1                                  <---------------AGL15       <---------YAB1    <---------ANAC58                                    ----------------->AGL3       --------->ICU4    <---------ANAC58                                  --------->ANAC46             --------->YAB1  <-----------GT1                         ------->TEIL--------->ANAC58            <---------YAB1 ---- -------AHL20(2)                  --------->YAB1      --------->ANAC58          --------->YAB1   <--- ------>AHL20(2)            <---------CCA1(2)   --------->ZAT6---------->DOF2  <---------YAB1<-------   ttttttacttgggttaatttatgttctctcatatattcaaaatgaatttgacactcacaccaaaaaaagtagaagcatgagatgataatcattttgatgt  232300        ----------->GT1   ---------->DOF2                                                                               <---  <---------AHL20(2)         --------->DAG2                                                      <---  --------->AHL20(2)        ---------->DOF2                    --------->YAB1              --------->ZAT6 ------->AtSPL3      ----------->GT1                          <---------YAB1             <-----------GT1 ------->AtSPL8     ----------->GT1                         <---------ICU4              <---------YAB1 --->TEIL      ---------->DOF2                              --------->YAB1            <---------ICU4 ----TEIL    <---------MYB52(2)                         --------->ICU4               --------->ICU4 --------AtSPL8--------->MYB52(1)           ----------->GT1--------->ICU4            <---------YAB1   acatttaaagaggtaactaaaggtgtttaaaaaagtttttgtacataagttaaaagaattgattatgataagcctaaaatatggaacattattactctac  232400                  --------->YAB1                                         ------->MYC3         ------->GAMYB                                    <---------ANAC58      --------->MYB52(1)    --------->CCA1(2)             <---------ANAC58   <---------ANAC58        --------->ARR14(2)  --------->ANAC58          <-------MYC3   <---------ANAC58        <---------ARR14(2)  --------->ANAC58     ------>ZmHOX2a(2)--------->GLK1(2) -------DOF2     <---------YAB1                --------->ANAC46    <---------At4g35610              < ------DAG2    --------->YAB1        <---------AHL20(2)   <---------ANAC46      ---------->DOF2  <---   ttttggcttaacagcatttataatagtcagatttgagaataaatcacactcgcaattgaagcgtgtttgatctcacatgcccaaaagaatccatccattt  232500                                                                               <---------AHL20(2)                                                              *TSS             --------->AHL20(2)                                                      ---------->DOF2         --------->AHL20(2)                               --------->DAG2   <---------AHL20(2)        --------->ICU4                              ---------->DOF2   --------->AHL20(2)     <------ZmHOX2a(1)                         ----------->GT1        --------->AHL20(1) ---------->DOF2 ----------DOF2     ---------->DOF2     --------->ALFIN1      <----------ID1 <---------YAB1---------- --------GT1     --------->AHL20(2)     ----------->GT1   ---------->DOF2 --------->AHL20(2)    -----   ttctttgcaaaaaactgaattaaaaagaagaaaaaaggagaagtgtgaaattttttaaaagaaagaaacaaaaggatttattaaaaaaaaaaaaaaagag  232600                                                                 --------->bZIP60(2)                                                                 --------->TGA1a                                                                 --------->ANAC55(1)                                                                 <---------O2                                                                 --------->O2                                                                 --------->ANAC58                                                                 ===============bZIP_DOF                                                                 --------->ANAC58                                                    ----------->GT1                                                 <------ZmHOX2a(2)                                                <---------ARR14(2)                                                --------->ARR11(3)                                                --------->ARR14(2)<-----------HVH21                                    ====================HOX2a_HOX2a                                    =====================HOX2a_HOX2a                --------->ANAC58    <------ZmHOX2a(1)            <---------ANAC55(2)      --------->At4g35610        ========================HOX2a_HOX2a                         <-------      <---------At4g35610        =======================HOX2a_HOX2a            <-----------GT1      --------->ZAT2    <----------ID1 ---------->DOF2           --------->ANAC46      --------->AHL20(2) >DOF2<---------ZAT2  ---------->DOF2  ====================================bZIP_DOF    <---------AHL20(2) ---->CCA1(2)   --------->ANAC58 <------ZmHOX2a(1)------>ZmHOX2a(2)  ---------->DOF2 --------->AHL20(2)   atgaagacagctcgagggatgcaatagagccaagaggaggagaaagatgggatctggtaaacaaaacacgtcaaagtcaaattacaaatttatattttat  232700                                                              <---------ICU4                             <---------YAB1                   --------->YAB1                 --------                        <----------DOF2                      <---------YAB1                  --------                   <---------AHL20(2)                      --------->YAB1                  ----------                   --------->AHL20(2)                     <------ZmHOX2a(2)        <-----------HVH21 --AHL20(2) ----------->RAV1(1)           ------>NtERF2  <---------ARR11(3)       --------->ANAC46   aaaacagataacaacaacaaattaaacttttattaatctctctctgcctctactcactggatcatcatagctccaaacttgtaccagtcgcatcaaagca  232800                                            ----------->HVH21                                          <---------MYB46(3)                                      --------->ALFIN1<---------------AGL15                                      <---------AtMYB61                  --------->ARR14(2)                                     <---------ZAT14  --------------->AGL15               <---------ANAC46                              ------>ZmHOX2a(1)      ----------------->AGL2  <-----------HVH21  <---------AtMYB61    <---------ARR11(3)<---------ANAC46                <---------ARR14(2) ->ANAC58              --------->ARR11(3)--------->ALFIN1                <---------MYB52(1) ->ANAC58        --------->CCA1(2)  <-----------RAV1(1)        ---------->DOF2 <---------ANAC46 >DOF2    >>>>>>>>>TBF1--------->ARR14(3)<---------AtMYB61 ---------->DOF2  <-----------RAV1(1)------   agttttggtgaagaagaagagacgaggtcttcctcttactgtggtggtgacattttctctaaaaagaaagtctccgatatgtcgcagagatggagtagaa  232900                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                            <--------                                                                                      --------->WOX13(1)                             <----------DOF2                                       <---------ARR11(3)                           ------>ZmHOX2a(1)                                       --------->ARR11(3)                      <---------GLK1(1)                                            --------->ARR14(2)                      --------->GLK1(1)                                            --------->AGP1 ---                     <---------ARR14(2)              <---------GLK1(2)             <---------ARR14(2)                     --------->ARR14(2)            <---------YAB1                 --------->At4g35610                     <-----------ARR10         <----------DOF2                 --------->At4g35610<--                  <---------ANAC58             <---------DAG2       <---------ANAC58 <-------TEIL----                  <---------ANAC58            --------->TOE2(3)     <---------ANAC58<------ZmHOX2a(2)                 <---------LBD16           <-----------GT1       ------->GAMYB <---------At4g35610--- ---->DOF2    <---------MYB52(1)         <-----------HVH21      --------->MYB46(3)--------->GLK1(1)   agaagagtagacttccattagcgggtctcctctttattctcgttgtcacctttatgattctcttcaacgagcgtagcattcagcagatccatcaccacgc  233000                                 <-------MYC3                                 ------->MYC2        --------->ANAC46    ------>MYB46(1) >NtERF2--------->ANAC58    ------>MYB83 -->bZIP60(2)            --------->HSFB2a(1) -->ANAC58          --------->LBD16 -->ANAC46          <---------HSFB2a(2) -->O2<---------ALFIN1   <---------HSFB2a(1)                 --------->TOE1(1) -->ANAC58--------->YAB1 --------->HSFC1(2)                 ------>ZmHOX2a(1)              <---------ZAT14 -ALFIN1--------->ANAC58 <---------HSFC1(2) --------->WRKY18(1)                            --------->ZAT14 ------>LBD16 <---------ARR11(3) ------->MYC3               --------->LBD16    --------->At4g35610 ----NtERF2   --------->ARR11(3) <-------MYC2  --------->ANAC58                <---------ZAT2  <----- ----->DEAR3(1)     --------->HSFB2a(2)    <-----------HVH21<---------LBD16    <---------At4g35610 --->NtERF2  <---------GLK1(2)<---------ALFIN1 --------->ANAC58    <-----------GT1        <---------ZAT6   cgcgagtcacactcaaaatctccgagaaccttccacgttcgatttcgtcaagcctaatgttcctcggattaactacttgggagctcatggtactgttctg  233100  Previous    Next  AGI:  At5g01610.1    Description:  Identical to Uncharacterized protein At5g01610 [Arabidopsis Thaliana] (GB:Q9M015;GB:Q0WT00;GB:Q84VV4); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G08890.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G08890.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN63135.1); contains InterPro domain Protein of unknown function DUF538 (InterPro:IPR007493) Range:  from: 230984    to: 232202    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g01620.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48780.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 232562    to: 234913    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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