Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------ANAC58      <---------ANAC58                                         <---------ARR14(2)   <---------REM1(1) <---------ICU4                                                --------->ARR14(2)<-------TEIL ->ZmHOX2a(2)             <-------TEIL                      <---------ANAC46 --------------->AtSPL3 ---ARR11(3)   <------ZmHOX2a(2)                   --------->DAG2    <---------ANAC58 -->ARR11(3) --------->At4g35610                  ---------->DOF2    <---------ANAC58   taagcattgctcgtgagatcaaaacgagttcatcgactcgattagtaagagaaaaagtcgttgtggatttgacttggtagaagtacatgtagcatactag  221000                                                                        <---------At4g35610                                                                        --------->At4g35610                                                                        <---------bZIP60(2)                                                                    <-------MYC3                                                                    ------->MYC3                                                                    <-----------HVH21                                                                   <---------bZIP60(1)                                                                   <---------ANAC58                                                                   --------->TGA1a                                                                   --------->ANAC55(2)                                                                   <---------TGA1a                                                                   <---------ANAC55(2)                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                   <---------O2                                                                   --------->O2                                                                 ------------->DYT1                                                                ----------->HVH21                                                               <-----------TGA1                                                               <-----------HVH21                                                              --------->TGA2(1)                                                              --------->O2   --------->bZIP60(1)                                                              <---------bZIP60(1)                                                              --------->ANAC58                                                              <---------O2   <---------bZIP60(1)                                                              --------->bZIP60(1)                                                              --------->ANAC58                                                              <---------TGA1a<---------ANAC55(2)                          --------->ZAT6                      --------->TGA1a----------->GT1                    --------->AHL20(2)                        <---------ANAC55(2)                    <---------AHL20(2)                        --------->bZIP60(2)                <---------AHL20(2)                            --------->ANAC55(1)               <---------AHL20(2)                             --------->ANAC55(2)               --------->AHL20(2) --------->ANAC58            --------->ANAC46              <---------WOX13(1)  --------->ANAC58         <------ZmHOX2a(2) <---------ANAC58        <---------MYB46(3)--------------->AtSPL3          <---------ARR11(3) <---------ANAC46      <-------GAMYB --------->AHL20(1)                    --------->ARR11(3) --------->ANAC55(2)     --------->MYB52(2) <-----------GT1       ===============================bZIP_DOF     <---------MYB46(3)<---------YAB1         ==========================bZIP_DOF <---------MYB46(3) <---------AHL20(1)        ---------->DOF2<-----------STF1<---------ANAC58   catttgttcgttgttgatttattttattacagtacaacgccttagcattaaagcatacaagatcacgtcacgtgagatggcgtaactaggggatgccaga  221100                                <---------AHL20(2)                           <-------TEIL                        --------->At4g35610                   =======================================bZIP_DOF                   <---------At4g35610                   --------->TGA1a <---------WOX13(1)                   --------->At4g35610                  --------->MYB59 <------------CBF                  >>>>>>>GRF7  --------->AHL20(2)                 <-----------RAV1(2)   <---------AHL20(2)   <---------At4g35610  <---------AHL20(1)    --------->ZAT2  --------->AHL20(1)    <---------ZAT2                                                              <  <---------AHL20(2)  <---------WRKY12                    <---------ATHB12                         <-  --------->AHL20(2)<-----------HVH21          <----------DOF2                      ------------>CBF< --------->YAB1<-----------HVH21--------->AHL20(2) <-----------GT1      ----------->GT1          ----   taaatataatgtctgaatgtcaggtcagcttcatttaattggttatgggcttttttctaaatcattcattcacgaggtgaaataagcccaatgggctgat  221200                                                         <---------ARR11(1)                                                         <---------ARR14(2)           ----------->GT1                               --------->ARR14(2)  ------->MYC3                                ----------->GT1  <-------MYC3                               <---------TOE1(3) ==============================bZIP_DOF      <---------TOE2(3) --------->O2                               ---------->DOF2 <---------O2                               <---------DOF5.7(2) --------->TGA1a                          <---------MYB52(1) <---------TGA1a               <---------AHL20(2)        --------->GLK1(2) ================================================MYC_MYB------>MYB46(1)---------->ID1 ---------TOE1(2)             <---------AHL20(2)     ----------------->AGL2 --------ALFIN1               --------->AHL20(2)   <-----------GT1    <-----------GT1 ---------TOE2(2)   <----------DOF2       --------->DOF5.7(2)  <---------ARR11(3)            -------- -->ZmHOX2a(2)   <-----------GT1         <-------GAMYB  ------>MYB83<---------ICU4           --------   cccacgtttgaaatagtttatactttctcaaattaaatcggtccgttaaagttaaaccaaatctagataatttttccctctgattttgaatttttctgac  221300                                                             --------->At4g35610                                                           <------NtERF2                                                         --------->ETT(1)                                                         <---------ANAC46                   <------------CBF                     <------NtERF2      --------->ARR11(3)         --------->MYB52(2)    <-----------HVH21      <---------ARR11(3)       <--------P             ----------->HVH21      <---------ARR14(2) <---------ZAT2             --------->LBD16            <------ZmHOX2a(1)      --------->ARR14(2) --------->ZAT2           <---------LBD16     ================HOX2a_HOX2a  <---------LBD16 <---------ARR14(2)  <------------CBF--------->ALFIN1<------ZmHOX2a(2) --->TGA1     <---------ZAT18<------MYB46(1)    <-----------HVH21   <---------GLK1(1)      ---------- --->HVH21    --------->ZAT18<------MYB83    <------------CBF<---------At4g35610           --------->YAB1   ggtttggggatattagcgcagaattggagctaggttagtggattgttcattgtccggtgtcggagatgagagatcagtcgaggaatttcgaaatggtaat  221400                                                      <------MYB83                                                     --------------->AtSPL3                                                     <---------AtMYB61                                                     <---------------AtSPL8                                                  --------->ALFIN1                                                <---------ANAC55(1)                                                <---------ANAC46                                                <---------TGA1a                                                <---------bZIP60(2)                                                <---------O2                                                --------->O2                                                --------->ANAC55(2)                                                =============MYC_MYB                                                <---------ANAC58                                          <---------ARR14(2)                                          --------->ARR14(2)                                         <------ZmHOX2a(1)                                     =====================bZIP_DOF                                     ---------->DOF2<--------P                  ==============================HOX2a_HOX2a                  =========================HOX2a_HOX2a<------MYB46(1)   --------->At4g35610     -----                  ------>ZmHOX2a(2) <------ZmHOX2a(1)--------------->AtSPL8                   ------>ZmHOX2a(1)       --------->At4g35610     --------->ATHB12 <---------ANAC58    --------->ANAC58         -------- ->GT1 <---------At4g35610    <---------YAB1 ----------->HVH21      --------->ANAC58        ---------   ttcatggggagatgaattgatccatgttttggatgataggaaaggatttgacgtgttggtacaaactctcgagcaactgagagctattccattctcctgc  221500                                                                                                    -                                                               <---------ANAC46                   ---         ---------->DOF2                                     <---------ANAC46               <--------    --------->ARR11(3)                                   <--------P                   <---------AHL20(2)    <---------ARR11(3)                         --------------->AGL15                  --------->AHL20(2)  ----------->ARR10             <---------TOE2(3)       <-------GAMYB                --------->AHL20(2) ------>HVH21          ------->TEIL           <-----------------AGL3                 <---------AHL20(2) ->TOE1(2)       <-------TEIL   <---------TOE1(2)<---------AHL20(2)           ----------->GT1    <--- -->RAV1(2)     --------->CCA1(2)             <-----------------AGL2         --------->ALFIN1   <----   gacgaagattttaaagagatacatgaatctctccaaggttgaatgccttcttaaattgggttgatgtgtgtttgattaagtggtgaatttaattttgttg  221600       --------->HSFB2a(2)       <---------HSFB2a(2)   --------->GLK1(1)   --------->CCA1(2)  --------->ARR14(2)  <---------ARR14(2)                                                      --------->ARR11(3)  <---------GLK1(2)                                                    >>>>>>>>>TBF1 ---------->ARR10                                              --------->LBD16 ------>LBD16                                                 <---------ANAC58 ---RAV1(1)                             <---------At4g35610   <---------ANAC58                 <----- ------ANAC46                           --------->At4g35610   <---------ANAC46                 ------ -----LBD16                <---------AtLEC2  ----------->GT1 <---------LBD16               ----------   cgcagatttgcagaagaaactcgatgtttgcaaggagaagacagatgaggcaaattcagagattgcggatgaagaagaaattgagcgtcttcagaaagag  221700                                               --------->ANAC55(2)                                               --------->ANAC55(1)                                               <---------ANAC55(1)                                               <---------ANAC55(2)                                            --------->ARR14(2)                                            --------->ARR11(1)                                      --------->At4g35610                          <---------MYB52(1)                                    <------ZmHOX2a(1)     <---------ZAT14         <-------GAMYB                                  --------->ALFIN1      --------->ANAC46          <---------At4g35610                                 <------ZmHOX2a(1)------->TEIL                   <---------MYB46(3) <                          --------->ZAT2    <---------ARR14(2)                   --------->MYB52(2) <                          <---------ZAT2  ----------->ARR10      --------->At4g35610                = ----ARR11(3)      xxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <-----------GT1           --------->SPL7   <--- --->ARR11(3)<<<<<<<ZML2  <---------At4g35610 <-------TEIL--------->ZAT14--------->ARR11(3)      ---- >DOF2 --------->ARR11(3) --------->At4g35610--------->CCA1(2)   <---------At4g35610         <-------   cttgatgaagagctagaactagagtgcaagctgaaggaggagcttagatacgtatttcactgaactgagcttaaacatctcgtccgttgattcaatgtca  221800 --------------->AGL15        <---------At4g35610                  --------->ATHB51 <---------------AGL15        --------->At4g35610                  --------->ATHB12      <----------- -----------------AGL2    --------->YAB1                       <------NtERF2             ------------ -----------------AGL3   <-------TEIL         <---------ARR11(3)  --------->ICU4   <---------GLK1(2) ==================================================================================================== ------YAB1      <---------ETT(2)     ------->TEIL          <------ZmHOX2a(1)--------->ZAT18 ----->ICU4      --------->ETT(2)--------->At4g35610     <---------LBD16     --------->ZAT14      <-- ----HVH21      <---------------------WRI1---------->DOF2<-----------RAV1(2) <---------ZAT14---------   tgactaattttggtttttgtcgacacattcatagctgatgaactcaaagacctgaattctcaggaggcattatttgaagagcacagattagctataaaga  221900  Previous    Next  AGI:  At5g01570.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G08880.1); similar to unknown [Populus trichocarpa] (GB:ABK93784.1) Range:  from: 221366    to: 222157    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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