Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->ANAC55(2)                                          <---------ANAC55(2)                                  <-----------HVH21                                 <------MYB83                             <---------TGA1a                             --------->TGA1a                             <---------O2 --------->ANAC46                             --------->O2 --------->ANAC55(1)                             --------->ANAC58                             --------->ANAC46                                          <---------YAB1              --------->ATHB12   <------MYB46(1)    ------>ZmHOX2a(1)          --------->ANAC58            <---------WOX13(1)  <---------TOE2(2)  --------->TOE2(3)           --------->ANAC46          --------->ATHB12   --------->ANAC58------->TEIL                      --------->ANAC58         <-------TEIL---------->DOF2     <-------TEIL           --------->AHL20(2)    --------->AHL20(2) ---->ZmHOX2a(1)     ==================bZIP_DOF--------->YAB1   <---------AHL20(2)  --------->ICU4 <-   cctcatccatattcattgattgtaaaagcacacgtaggtcacatacgtatcatcctaaaccccaaattaaaaaaaaaaactaagcaatttttatacatgg  206000                            <---------------AGL15                           ----------------->AGL2                           ----------------->AGL1                           <-----------------AG                           <-----------------AGL3                      --------->ARR11(3)                      <---------ARR11(3)                      <---------AHL20(1)                      --------->AHL20(1)                                              <---------At5g28300                     --------->YAB1                                                  <-----------GT1               --------->ANAC58                                                 <---------DAG2               --------->AtLEC2          --------->ZAT6                         <----------DOF2            <---------ATHB12--------------->AGL15                            <---------ALFIN1           --------->ANAC58----------------->AG<---------ARR11(3)           --------->ZAT18           --------->ANAC58----------------->AGL3                           <---------ZAT18--------->SPL7       <------ZmHOX2a(2)   <-----------------AGL1              ----------->GT1  =====================      <---------ARR14(2)   <-----------------AGL2      --------->GLK1(2)  <---------PCF5 <---------SPL7 ---------DOF2 --------->ANAC58    ----------->GT1    <---------GLK1(2)   <---------TCP16(1)   cctttggcgatccaagcatgcaaaaatattccataaatggttaacacaaaatcatcgattctgaggggttaactagggtccactttattaccgtatggaa  206100                                                         <---------ANAC58                                                         <---------bZIP60(2)                                                         <---------O2                                                         <---------ANAC46                                                         <---------ANAC58                                                      ----------->HVH21                                                     <-------MYC4                                                     <-------MYC3                                                     ------->MYC4                                                     ------->MYC3                                                     <-------MYC2                                                     ------->MYC2                                                     ------->PIF5                                                     <-------PIF5                                                    <---------TGA1a                                                    <---------O2                                                    --------->O2                                                    <--------ABF1          ---------->DOF2                           --------->bZIP60(2)       <-----------HVH21                            <---------ANAC55(2)      ===============bZIP_DOF                       --------->TGA1a      --------->ANAC46                              <<<<<<<<<<HY5      --------->ANAC58                              --------->ANAC55(2)      --------->ANAC55(1)         --------->ANAC58  <<<<<<<<<<AtMYC2      <---------ANAC55(2)         --------->ANAC58  =================================bZIP_DOF      --------->ANAC58           <-------TEIL       <<<<<<<<<<ABI5                     <-----------HVH21      --------->TGA1a            --------->SPL7    ------>NtERF2                      <---------DEAR3(2)      --------->bZIP60(2)        ------->TEIL     <------------OsbHLH66             --------->DDF1      --------->O2             <---------SPL7     <---------ALFIN1                 <-----------HVH21      <---------O2           ------>MYB46(1)    ------>NtERF2                    <-------MYC3      <---------TGA1a        ------>MYB83       --------->LBD16                  ------->MYC3    <---------ALFIN1       --------->TOE1(2)   --------->ANAC46           ---------->DOF2  <---------At4g35610 ===============bZIP_DOF   <---------MYB59    <---------LBD16       ----------->HVH21<---------DREB2C(2)   atagagacacgtcaaagctagtatttggacctacgtacgctcatgtattccgccacgtgtcgtggtttcactgacataaaacacatgtcggtcagataat  206200                                                <------NtERF2                                               ------>NtERF2                                              --------->RAP2.3(2)                                              --------->RRTF1(2)                            <--------                                              --------->RAP2.6(2)              --------->O2 <--------ATHB1                                              --------->RAP2.3(3)              <---------ANAC58                                              --------->DEAR3(1)               <---------ANAC58                                              --------->ATERF1(2)              <---------ANAC46                                              --------->DREB2C(2)              <---------O2 <--------HAHB4                                              <---------ATERF1(2)              --------->TGA1a                                              --------->RRTF1(3)            --------->DEAR3(1)                                             --------->RRTF1(1)            <---------LBD16  ---------                                             --------->RAP2.3(1)           --------->At4g35610                                             --------->ERF1                <---------At4g35610 <-----                                             --------->ATERF1(1)           --------->ATERF1(1) ------                                             --------->DEAR4(2)         ----------->HVH21   ---------                                             --------->ORA47(2)        <-----------HVH21   --------->ICU4                                            ------>NtERF2             ------>ZmHOX2a(1)    <---------ATHB51                                            --------->ABI4(1)     <-----------HVH21        --------->AHL20(2)                                            <---------ATERF1(1)  ========================bZIP_bZIP                                           --------->ANAC46      --------->ANAC58          <---------ATHB12                                           --------->DEAR3(1)    <---------TGA1a      --------->ANAC58                                          --------->DEAR3(2)     --------->TGA1a      --------->ANAC58                                          --------->MYB46(3)     --------->bZIP60(2) --------->WOX13(1)                 --------->ANAC58        <---------At5g28300     --------->ANAC58 <-----------HVH21                 --------->ANAC58      <---------MYB55(2)        --------->ANAC46--------->ALFIN1 ---               ---------->DOF2         --------->MYB46(3)      <---------ALFIN1<---------TGA1a<------     ----------->HVH21                --------->ANAC46    ----------->HVH21--------->DEAR3(2) -------   tctagctctcacgacgatgaagcaatgtaggctcacttccactcaccgccgcctatagcagtgacacacgtcctgtcaccggcgtgtcactcaataatta  206300                                                   --------->MYB52(1)                                                ------>ZmHOX2a(2)                                              <---------PCF2                                              <---------ARR14(2)                                              --------->ARR14(2)                                            <---------MYB46(3)                                           --------->ALFIN1                                         <---------ANAC46     <---------YAB1                      <------MYB83    <-----------GT1                      <------MYB46(1) --------->ARR11(3)                     --------->MYB111(2) <---------ARR14(2)                     --------->MYB46(2) --------->ARR14(2)                     --------->MYB52(2)                 <---------YAB1 <---------ARR11(3)  <---------TOE2(3)  --------->MYB111(1)              <-----------GT1 <---------GLK1(2) <---------AHL20(2)   --------->MYB59                 --------->ICU4 -ICU4          <---------AHL20(2)      --------->MYB55(2)            <---------ICU4 >YAB1         --------->AHL20(2)       <---------AtMYB61          ----------->GT1 ----ICU4  <---------AHL20(2)          <---------MYB55(1)     <---------DAG2                       <- --->YAB1  <---------YAB1             <<<<<<<<<MYB98  ------->GAMYB--------->YAB1             <------ >ATHB51   --------->AHL20(2) =========================HOX2a_HOX2a<---------TOE2(3)        --------->GLK1(2) ------>YAB1   <---------AHL20(2)     <---------MYB52(1)      <----------DOF2         ------>ZmHOX2a(1) ---YAB1  <---------AHL20(2)  ========================HOX2a_HOX2a <---------TOE1(3)   --------->LBD16 -->ICU4  --------->AHL20(2)  ------>ZmHOX2a(1)<------ZmHOX2a(2)  <---------YAB1    ----------->RAV1(2)   tcagattttcattttaattaaataatgttatcctatatttgttaggtggatcccaacgggagggctttatggtaattaccatttactcctgagaagcttt  206400                                         --------->HSFB2a(2)                                     <---------ANAC46                                     <---------ANAC58                                  <---------MYB52(1)                                                <                                  <---------ARR14(2)                                                <                                <---------ANAC58                                       --------->AHL20(1)       --------->ALFIN1         <---------ANAC58                              <----------DOF2       <     <---------ANAC58          --------------->AtSPL3              --------->ANAC58    <---------AHL20(1)     <---------ANAC46     <-----------RAV1(1)            <----------DOF2     <---------DAG2         -     <---------ANAC58     --------->ALFIN1        ---------->DOF2  --------->ANAC58   --------->ICU4< --------YAB1       <------ZmHOX2a(1)<---------ANAC58 <---------ARR11(3) ------>ZmHOX2a(1)          < ----DOF2   <---------ANAC46   *TSS --------->MYB52(2)--------->ARR11(3)<---------ALFIN1<---------YAB1   tatttttgtgtgtggagtagtaggagaagtgttgccgttccttgtcgaacaaaaaagagctttagacagacgctcctccccttttgtaatatttttgata  206500                <---------ARR14(2)                <---------ARR11(1)                                                         <-------GAMYB               <---------CCA1(2)                                                          <---------MYB46(3)               <---------ARR14(1)                                                        <---------AtMYB61           --------->ANAC46                                                          <---------ANAC58     <---------ZAT18                                                                 <---------ANAC58     --------->ZAT18            --------->ARR14(2)                                   <---------ANAC46     <---------ZAT14            <---------ARR14(2)                               --------->ATERF1(1)  -------------->OsCBT    <---------ARR11(3)                                <-----------RAV1(1) ---------ANAC55(1)       --------->ARR11(3)                                ------>ZmHOX2a(1)  <----- ---------ANAC58--------->GLK1(2)                                     <<<<<<<<<TBF1------>NtERF2  --- ---------ANAC58--------->ARR14(2)                                 <<<<<<<<<TBF1<---------At4g35610 -------->ANAC55(2)   --------->YAB1------>ZmHOX2a(1)           <<<<<<<<<TBF1   --------->At4g35610 - ---------ANAC46------->TEIL>>>>>>>>>RAP2.2                 ------>ZmHOX2a(1)<-----------HVH21 <----- ---------ANAC55(2)--------->WOX13(1)   <----------DOF2  ------>ZmHOX2a(1)----------->RAV1(2)  <-----   ttacgtgtgctctacgcgaatctatcaatatctaaatcctctctttctctctctctctcctccttcttcttcttcttcctgtcgctgccttgtggttgag  206600                                                                                               ------                                                                                        <---------DREB2C(2)                                                                                        <---------DEAR4(1)                                                                                        <---------At1g77200                                                                                        <---------DEAR3(1)                                                                                      <-----------HVH21 ----ANAC58                                                                          <-----------RAV1(1) ------>ZAT18                                                                      --------->At4g35610 -------->At4g35610                                                                <---------At4g35610 ----ANAC58            --------->AtLEC2             <---------MYB46(3)  <---------CCA1(1)    -------- ----ANAC46       --------->ANAC46      --------->GLK1(2)               <---------RVE1(1)    <-------   tgagcaaaaaaactcaaaaccctccatggaaatgggagagagaatcaattcgagttgttgttagggggtttgcgatattttaggcttctgtcggtgatct  206700                                                           --------->At4g35610          --------->AHL20(2)                               <---------At4g35610      --------->AHL20(2)                                   <---------ZAT2 --------->AtMYB61                                         --------->ZAT2 >ZmHOX2a(2)                                     <---------LBD16 ->ARR11(3)                                   --------->ZAT6                              ---------->TaMYB80 --ARR11(3)    ---------->DOF2              <-----------HVH21                        <---------LBD16   cgaccaaaaaaaataaacaaaggagctagtagggttctgttttctctatcactcggaaggaagctggtttatgtcaaaactttgttcttcggaaaatgcg  206800                --------->ANAC58                 ----------->RAV1(1)                --------->ANAC46                 ------>NtERF2                --------->ANAC58    <---------GLK1(1)           --------->ARR14(2)       --------->GLK1(1)           <---------ARR14(2)  --------->At4g35610        <---------TOE2(3)      <---------At4g35610 <---------ALFIN1                             <----   aaaatcgttcaaggattcactcaaggctcttgaagctgatatccagttcgccaacactctgtaaatctctctctctctctatttcttctctctgtttttc  206900  Previous    Next  AGI:  At5g01520.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G47160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15813.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 206431    to: 208610    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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