Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------                                                                                          -----------                                                                                    <---------YAB1                                                                                   --------->TOE2(3)                                                                                  <--------HAHB4                                                                                  <---------ICU4                                                                                  --------->ATHB12                           <-----------GT1                         <---------ARR11(3)    --------->DAG2                          <-----------GT1                  <---------DAG2        --------->ICU4                  <------ZmHOX2a(1)                        <----------DOF2     --------->YAB1      --                --------->ANAC58                     --------->HSFC1(2)  <---------MYB59 <-----------                <---------------AtSPL8         ---------->DOF2     --------->ARR11(3)--------->AHL20(2) --ANAC58       --------->ANAC58     <---------ATHB12<---------HSFC1(2)-------->P<---------YAB1    -- --ANAC58   <---------RAP2.6(3)    --------->WOX13(1)--------->At4g35610--------->ANAC46---------->DOF2   aatattgaacgagccgataaggaacatatttccaatccaatcagccagagaaagaagcttactttttgatatctacccaattcatcattaaaaagtacaa  146800                                                                                      ---------->DOF2                                                                                     <---------ATHB12                                                                                --------->ANAC46                         ------->TEIL                                    ============================               <------ZmHOX2a(1)                                         <------ZmHOX2a(2) -ID1        <---------TOE2(3)                                           ============================ >GT1 ----------->GT1<---------------AtSPL8                --------->ANAC58     --------->ANAC58  --- ------->TOE1(3)     --------------->AtSPL8                --------->ANAC58     --------->ANAC58 <--- ----AtSPL8  --------->ANAC46                       ------->TEIL        <---------ARR11(3)     ------ ------->TOE2(3)    ---------->DOF2        --------->AHL20(2)           --------->ARR11(3) <---------   accctaaatcgttataaggaatgaaagtacctgtttgccaaaccattaactatgaactcgttcgcaacgtatgagatcactctcgcaataaagtttcctc  146900                                                           ------>MYB46(1)                                                           ------>MYB83                                                         <---------MYB111(1)                                                         --------->AtMYB61  ------>NtERF2                                <---------ICU4  --------->LBD16                              <--------ATHB1 --------->ANAC58                              --------->YAB1 --------->ANAC58                              --------->ATHB51 --------->ANAC46                  --------->TOE1(3)    --------->ANAC46 =HOX2a_HOX2a                --------->ANAC58  <--------HAHB4 ====HOX2a_HOX2a             --------->ANAC58 --------->ICU4              --------->HSFB2a(2) --->ZmHOX2a(1)              --------->ANAC46 <---------ATHB51            <---------HSFC1(1) ------ALFIN1          --------->YAB1         --------->AHL20(2)          <---------HSFB2a(2)   <---- >ZmHOX2a(1)        ------>ZmHOX2a(1)         <---------ATHB12   ----------->RAV1(1)       ---------- --GT1         <----------DOF2     --------->TOE2(3) --------->MYB46(3)   --------->HSFC1(1)   ------   ctcccgccattctcgctctttcctatcaaaaacgaaaccctaatgtcaataattatccaccaaatcgcaacaatttctagagaaaactaaatccaacagg  147000                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                         ------->TEIL    --------->ANAC58                                                                    --------->At4g35610  --------->ANAC46                                                                    <---------At4g35610  --------->ANAC58 --ZmHOX2a(1)                                                     <-----------RAV1(2)  ---------->DOF2 ->RAV1(1)      ----------->GT1       --------->YAB1            --------->TOE1(3)<---------ARR11(3) ----->GT1 <---------GLK1(2)  <----------DOF2                   --------->TOE2(3)--------->ARR11(3)   aaaataagagacagaaactcgaaaaatcacagctttacaaacaaaatcaaacaacaattgataaaacctcagatgaatcaagagatcgtataagcaagag  147100                                                 ------>ZmHOX2a(2)                                               --------->AGP1                                               <---------ARR14(2)                                               <---------AGP1                                               --------->ARR14(2)                                               <---------ARR11(3)                                         ------>MYB83                                       --------->MYB46(3)                                       <---------MYB59                                      --------->ANAC58                                      --------->ANAC58                                  <---------HSFB2a(2)                                  --------->HSFB2a(2)<-----------HVH21                                <-------TEIL   <-----------ARR10                             <------MYB46(1)   <---------ARR14(3)        ----------->RAV1(2)  --------->HSFC1(2)--------->ARR11(3)        --------->ANAC55(2)  <------MYB83------>MYB46(1)       -------->P            <---------HSFB2a(1)--------->CCA1(2)    <----------DOF2          --------->HSFB2a(1)<------ZmHOX2a(2)                --------->ARR14(2) ------>ARR14(2)             <---------HSFC1(2)--------->ARR14(3)                <---------GLK1(2) -------ARR14(2)          =============================HOX2a_HOX2a               <---------ARR14(2)*TSS ------>GLK1(2)           ==============================HOX2a_HOX2a        <-----------GT1 --------->AHL20(2) ------GLK1(2)            <------ZmHOX2a(1)  ----------->ARR10      <-----------GT1   ---------->ID1   aatcggccttacctgatgcaaacgaagaggaaggttcgagacccaacaagatctgcgtcaagtccctattttacattataccagatttgtccattatata  147200                    <------NtERF2                   ------>NtERF2                  <---------RAP2.3(3)                  --------->ATERF1(2)                  <---------DEAR3(1)                  <---------ANAC46                  <---------RAP2.6(2)                 --------->RAP2.6(3)               ----------->TGA1                               --------->SPL7               ----------->HVH21                            <---------SPL7              <-----------HVH21                 <---------TOE1(2)<-----------HVH21        --------->MYB52(1)             --------->O2          <---------ANAC46         ----------->HVH21----------->GT1 --------             <---------O2          <---------ANAC55(2)     --------->TOE1(1) --------->HSFB2a(2)            ------>ZmHOX2a(1)      --------->ANAC55(2)     --------->TOE2(1) --------->ANAC55(2)      --------->HSFB2a(1)          <---------ANAC58       <---------At4g35610<---------HSFB2a(2)    <---------CCA1(2)              <---------ANAC58       --------->At4g35610<---------ANAC55(2)<----   gacctcgcatcttcctcgtgacggcgaatgagtttttgcgtaatttgtcttaggtctctcatcggacggtcacgatgttctgtaacaaaatcgaacggtt  147300                 --------->TOE2(3)               ------>ZmHOX2a(1)       ------>MYB46(1) --------->TOE1(3)    --------->GLK1(1)       ------>MYB83    --------->TOE2(3)    <---------GLK1(1)     --------->MYB46(3)<---------MYB59  <---------HSFB2a(2)  <-----------GT1--------->TOE1(3)      --------->HSFB2a(2)                                       <-- --->GT1       --------->ICU4           --------->HSFC1(1)       <-----------GT1                <---- ---TEIL     <---------WRKY38(1)       <---------LBD16<-----------GT1       <-----------GT1--------->CCA1(2)   catattacccactagtcaacattaacctaaaaactcttagttctggaattcctattttacccttgtttctccctctatttacaaataggccagagacggg  147400                             <----------DOF2                            <---------YAB1                          <-----------GT1                    --------->MYB52(1)                         <---------YAB1                  --------->YAB1                --------->YAB1                      <---------YAB1                    <---------AHL20(2)            <---------YAB1                      <---------AHL20(2)               --------->AHL20(2)       --------->ARR11(3) ---------RAV1(2)    <---------AHL20(1)           <-----------HVH21             <---------ARR11(3) -------HVH21  ----------->GT1                    <---------ARR11(3) <------NtERF2------>ZmHOX2a(2) -   ccaggcccatctaggccttgtaatattattacttttgttttagtcacttcaaggtcatataataaacgggccgagtctgtttgatcttatgaaaattgac  147500                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                              ------>ZmHOX2a(1)                                  ----------->RAV1(1)                                      ------>ZmHOX2a(1)                               ------>NtERF2                                         <---------ZAT2                              <---------ETT(1)            <---------ARR14(2)         --------->ZAT2 -         <---------ZAT14      --------->ANAC46           <------ZmHOX2a(1)      ------->GAMYB =======         --------->ZAT14 --------->ARR14(2)  ----------->GT1         <-----------GT1 --------->At4g35610   --------->YAB1        <---------ARR14(2) <------ZmHOX2a(1)       <-----------GT1  <---------At4g35610 -------->WOX13(1)<---------MYB52(2)       ----------->GT1--------->ARR14(2) <-----------GT1  =======   gacaatcacaatacactgaaacaaacaaatctccgacaacacaagaggagaaaaacagaggatttgggtttttcccgtttaaccctcagcttcctcctag  147600                                    <---------ARR14(2)                                            ---                                    ------->TEIL                                                  <--  <---------WOX13(1)    ------>ZmHOX2a(2)                                                         --- ------ANAC58          <------ZmHOX2a(2)                                                          <-- ------ANAC58         <---------ARR14(2)                                                          --- ---->STY1(2)         --------->ARR14(2)       <-----------RAV1(2)                         --------->At4g35610 -------->ATHB12     <------ZmHOX2a(1)<---------ANAC46                 --------->YAB1   ============= =============================HOX2a_HOX2a<---------MYB52(1)   <<<<<<<<<EIN3             <------ZmHOX2a(2) ==============================HOX2a_HOX2a<--------P    >>>>>>>>>>>>>>>>>LFY--------->ALFIN1      <--   cttgatttacaaatgagccaataggatccgattccatgtatcgggtagtccaggtaaacaccaatgtatacaatcagcgtgatgcattggatcagccctc  147700  Previous    Next  AGI:  At5g01350.1    Description:  similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ49682.1); similar to Os04g0508100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053268.1) Range:  from: 145635    to: 147199    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g01360.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50124.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 147481    to: 149366    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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