Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->LBD16                 <---------HSFB2a(2)              --------->GLK1(2)              <---------ARR14(2)              --------->ARR14(2)          <-----------------AGL1          --------->ANAC58          --------->ANAC58                                               <-------GAMYB          <------NtERF2                                <---------LBD16  <---------MYB46(3)          ----------------->AGL1                    <-----------HVH21   <---------DEAR3(2)         ------>NtERF2                           <-----------------AGL1<---------RAP2.6(2)    ------>ZmHOX2a(2)        <---------ALFIN1                         ----------------->AGL1<---------DEAR3(1)    <------ZmHOX2a(2)        --------->DEAR3(1)                    <----------DOF2      ---------->DOF2          <--------       <---------ABI4(2)                 ----------->HVH21      ------>ZmHOX2a(1)           ---------      <-----------HVH21                 <---------ANAC58        =====================================HOX2a_HOX2a      <---------ATERF1(1)               <---------ANAC58       --------->TOE2(3)          <---------MYB46(3)     --------->DEAR3(1)                <---------At4g35610     --------->TOE1(3)       <-------GAMYB    <---------LBD16 ---------->DOF2    --------->At4g35610  --------->ARR14(2)        <---------ANAC58   --------->MYB52(1)     --------->MYB52(1) <---------DAG2 <---------ARR14(2)        <---------ANAC46 ----->HSFB2a(2)<---------LBD16    --------->ATHB12--------->LBD16---------->DOF2     <---------ANAC58 >At4g35610--------->DEAR3(1)     <---------YAB1 <---------LBD16====================================HOX2a_HOX2a   aagaacaccggcaccgaatccggaaagaaaacggccacgattgctgacctttccggtctcggaatccttaaaggcggtttgaaacatggcgttggatccc  144300                  <-----------HVH21                 <---------ANAC58                                               <---------ALFIN1        <---------ZAT14                                     --------->ANAC58   --------->MYB46(3)        --------->ZAT18             ----------->GT1         --------->ANAC58   <---------MYB55(2)        <---------ZAT18           --------->SPL7         --------->ZAT18      --------->SPL7     <---------ANAC46           <---------SPL7        ---------->DOF2  <---------ANAC58     <---------ANAC58          <---------MYB52(2)   --------->LBD16    <---------DEAR3(2)     <---------ANAC58 --------->At4g35610          --------->HSFB2a(2) <---------ANAC58 -ARR14(2)       <---------ANAC58--------->MYB52(1)<---------HSFB2a(2)<---------DEAR3(1)   ---------- >ARR14(2)------->TEIL<---------At4g35610      <----------DOF2      ------>ZmHOX2a(1)     --------->MYB46(3)   atccgaagcgtgtacttaagcgtgagatgagtagcgaacggtgttaagcctttccagagagcacgaactccttcggtgcgaaccaccttcgaaccacagt  144400                              <---------ZAT2                          <------ZmHOX2a(2)                   ------>NtERF2                   <---------ATERF1(1)                  --------->RAP2.3(3)                  --------->At1g77200                  --------->DEAR3(1)                  ----------->HVH21                  <---------DEAR3(1)                           <------MYB83                 --------->ORA47(2)                            <------MYB46(1)                 --------->DEAR3(2)                          <--------P                 --------->ERF1                             <---------ANAC46                 --------->RRTF1(1)                        <------MYB46(1)              --------->LBD16                 --------->ATERF1(1)                       <---------MYB46(3)           ------>NtERF2                 <------NtERF2--------->ZAT2               <------MYB83             --------->ANAC46                 --------->RAP2.3(1)                       --------->MYB55(2)     <---------ALFIN1       <----------DOF2------>NtERF2                       <---------AtMYB61       --------->AtMYB61       --------------------->WRI1                      --------->ATHB12  --------->ANAC58   <---------ARR14(2)--------->ANAC46              <---------ANAC46      --------->ANAC46   --------->GLK1(2)<------NtERF2                <---------TGA2(2)       --------->ANAC58         --- ->RAV1(1)      <---------ATERF1(1)          <---------YAB1--------->ATHB12      --------->MYB46(3)   gagcgattcctttgtaagcgccgacgcgatctagctggagacgcgttttgattacgtcgattggttggagacaacaagcctcgaccactccgcctagtga  144500                          <---------At4g35610                             <-----------HVH21                         --------->ARR14(2)                               <---------MYB52(1)                         <---------ARR14(2)                              --------->At4g35610                         --------->GLK1(2)                               <---------At4g35610                        <---------GLK1(2)                <---------ARR14(2)                        <---------ARR14(2)               --------->ARR14(2)       --------->GLK1(2)                       <------NtERF2                     <---------ARR11(3)   <---------At4g35610                    <---------LBD16                     <---------CCA1(2)<---------DEAR3(2)                  <---------DEAR3(1)                 <------NtERF2      <---------DEAR3(1)                  --------->ANAC46                  ------>NtERF2       <---------MYB46(3)      -----                 --------->SPL7             <---------MYB52(1)         <---------ORA47(1)   <--------            <------------------SPL14      <---------ANAC58             --------->SPL7       ---------         <----------DOF2--------->ARR14(2)<---------ANAC58            ------>NtERF2     --------->GLK1(1) -------->RAV1(2)------->TEIL  <----------DOF2    ---------->ID1   ------>ZmHOX2a(1)--------->YAB1   gcctgagactgctttcatgtacggcggaatctgcttcttcgattccgttctcgtcgccatatctgattcctcggccggtgagcgaatcagaaatcgagaa  144600                                                                                                 ----                                                                                            ---------         ---------->DOF2                                                                    <-------- <---------At4g35610             ------>ZmHOX2a(1)                                          <-------- --------->At4g35610    --------->CCA1(2)                                     ======================= ------------------->ANAC81   ---------->ID1                                  ----------------->AG -HSFB2a(2)            <---------ARR11(3)                    <---------AHL20(2)            <---------ANAC58 >HSFB2a(2)            --------->ARR11(3)       <---------GLK1(2) <----------DOF2          <---------ANAC58   ggaagcagagagaaagagagagagagatattcgtccttcttctcgttacagactctctgctatttattcttttgttattttccaaaaatgtttgctttag  144700                                                 --------->DAG2                                     <-------GAMYB  --------->ALFIN1                                    <---------MYB46(3) ---------->DOF2              <------------CBF  ---------->DOF2 ------>DOF2                <---------YAB1    ------>ZmHOX2a(1)        <----------DOF2 ------>AGL15               <---------TOE2(3)--------->TOE2(3)        <---------DAG2            <---- --DOF2---------->DOF2--------->ARR11(3)     --------->TOE1(3)    ----------->HVH21            ------ -------AGL15      *TSS <------------CBF <---------CCA1(2)    ---------->DOF2                <------- =======MADS_MADS ---------->DOF2   --------->MYB52(2)    ---------->DOF2          <----------DOF2   aaagaaagaaaaagataacaaaaagaaattgagattgtttgttgtatccttaaagtgtgagaaagaaagtgacctttttttttttcttttagagatgtca  144800                      <------MYB83               --------->YAB1              <---------YAB1                                                                     <---       --------->ARR14(2)           <---------AHL20(2)                                           ----       <---------GLK1(2)            --------->AHL20(2)        --------->YAB1            <---------YAB1  ------------>CBF    <------MYB46(1)                        ----------->GT1            --------->ANAC58 --------CBF--------->YAB1     --------->AHL20(2)     --------->YAB1               --------->ANAC46 --->ATHB12<---------------AGL15--------->AHL20(2)   <---------ATHB12    <-----------GT1--------->ANAC46 ----HVH21 <---------YAB1      <---------AHL20(2)  --------->WOX13(1) <----------DOF2   --------->ANAC58   ttggcacaatattctcataatagtgggttttatttaaaataaatatgcatattcaatcaaaaaatgaaaatacttttacatcttcaaaccacgatagtag  144900                               <--------P                            <---------TOE2(3)                          ------->GAMYB                         --------->MYB46(3)                        --------->ANAC58<---------ANAC58         <----------DOF2--------->ANAC58<---------ANAC58        <---------DAG2 ------->GAMYB   ---------->ID1                 <--------P                    <     <---------ALFIN1 --------->MYB46(3)----------->GT1        <---------AHL20(2)              ------ ------ZAT6           <---------MYB111(2)                      --------->AHL20(2)             <------ ----->ICU4           <---------MYB55(2)<---------ANAC46      --------->YAB1                <--------   tgatcaaacacctttcaagtttcaacaaccaaggtaagtttggcgtaaatcgatttcatcaccataaaaatggtagatgtgatttgggcctcttattaaa  145000                                                           <---------ANAC58                                                           <---------ANAC58 ---------PCF5                            <---------MYB59<---------YAB1 ---->DOF2--------->ATHB12    ------->GAMYB --------->MYB52(1)<------MYB46(1)                      -- ---AHL20(2)                 --------->MYB46(3)  ------>MYB46(1)                    --------->ANAC58 -YAB1 <----------DOF2     --------->MYB52(1)    ------>MYB83 <------MYB83          --------->ANAC58   agggaccatctttgatttgatgtcttattcaacggtcgtaaatgcctaaccaaatgactatgcttggtcattgtttttagtttcgcaaggccaatagcca  145100                                                                               <----------DOF2                                                                               --------------->AGL15                                                                               <---------------AGL15                                                                            <-----------GT1                                                                        <----------DOF2                                                                    <---------CCA1(2)              --------->ATHB12                                   <<<<<<<<<<AtSR1          <----------DOF2                                       --------->ANAC55(2)         <---------DAG2                                         <---------ANAC58      <-----------GT1            ---------->ID1                 <---------ANAC55(1)     <-----------GT1     ---------->ID1                         <---------ANAC58                    <  <---------ICU4     <----------DOF2     <----------DOF2        <---------ANAC46                    - <---------YAB1     --------------------->WRI1                  <---------ANAC55(2)                 - --------->ICU4     <---------DAG2  ------>ZmHOX2a(1)         <-----------GT1---------->ID1       <-- ------->YAB1<---------YAB1  <----------DOF2         <xxxxxxxxxxxxxxxxxsmallRNA(se3)           <-----   ttgattattacccttttcattgcctttttcgctttgtcctcttctttggtttagaatgttgttgttacgcgtttcttttttctttttctagggacaattt  145200  Previous    Next  AGI:  At5g01340.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT2G37890.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81800.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 143054    to: 144719    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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