Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------ANAC46         <---------ANAC58                ----------->GT1                                  --------->ARR11(3)         <---------ANAC58                <----------ID1                                <---------AHL20(2)  <<<<<<<<<<GT-3b                     ---------->DOF2                                  --------->AHL20(2) --->ZmHOX2a(1)                  <-----------------AG                     ----------->GT1<---------CCA1(2) -->AtSPL8                       <-----------------AGL1       <-----------GT1<---------AHL20(2)   ctatttttcttacttgtataaatccacaattgttttactcaaaaggaaaaaaaaactatcaattttgcaatttggctagttaattcaatttatatctatt  124900                                              <---------TOE2(3)                                --------->AHL20(2)                                <---------AHL20(2)                               --------->AHL20(1)                               <---------AHL20(2)                               --------->AHL20(2)              <---------AHL20(2)                      ------->TEIL      --------->ATHB12      <---------AHL20(1)                  ------>ZmHOX2a(2) <-----------GT1           --------->AHL20(1)          <---------YAB1       <---------AHL20(1) <----------DOF2                   <---------GLK1(2)   tgttttaaaactatatttgatctgtatgtgcaatttatttactgatttgaggcttttgagcatatatatttagtgaatcgattatagaatttgtattgaa  125000                                                                             <---------HSFB2a(2)                                                                      <-------GAMYB                                                                     --------->MYB46(2)                                                --------->ALFIN1     --------->MYB52(2)                               --------->ANAC58------->MYC3          <---------MYB46(3)                               --------->ANAC58--------->TOE1(2)     --------->MYB111(1)                          <----------ID1       --------->TOE2(2)     --------->MYB111(2)      <------                      <------------CBF         <-------MYC3      <---------TOE2(3)       <---------ANAC55(2)   caatgagagaagaacgaagacatggattgggacaagtactatacataaacgtgggtaatgtgctatgaaggtagttgtttgagaagacagtacgtagagt  125100                                                                                             <-------MYC4                                                                                             <-------PIF5                                                                                             ------->MYC4                                                                                             ------->MYC2                                                                                             ------->PIF5                                                                                             ------->PIF4                                                                                             <-------MYC3                                                                                             <-------MYC2                                                                                             <-------PIF4                                                                                             ------->MYC3                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                              --------->ANAC58              <--------                                                              --------->ANAC58              =========                                                             ------->TEIL                   <--------                                             ------------>CBF--------->SPL7                ----------                  <---------TOE1(3)         >>>>>>>>>>>>>>>>>LFY                       --------->ATERF1(1)             <---------ICU4             <---------ZAT14     ------>MYB83 --------->ANAC55(2)---------             --------->ATHB12           --------->ZAT14     ------>MYB46(1)           ------>NtERF2             -------->HAHB4         <---------ALFIN1      --------->DEAR3(1)         <---------ARR14(2)            <---------ATHB12       --------->ZAT14        --------->MYB46(3)         --------->ARR14(2)            --------->ICU4         <---------ZAT14        <---------MYB46(2)       --------->LBD16   ----------->GT1<---------TOE2(3)<---------ZAT18        <---------MYB52(2)      --------->ANAC46 --------->At4g35610               --------->ZAT18       --------->ANAC46<---------ANAC55(2)<-------- <---------At4g35610          <---------ANAC58         <-----------GT1   <---------ANAC46 <---------ALFIN1 ---ZAT6    <---------YAB1    <---------ANAC58   <---------ATHB12<---------ALFIN1<---------LBD16   ttgagctgtaagaaatgattagggtttgtttttcgtctgcacttcagtccaatgttttcaccgaaccccactactacgtgaaacccggagcctcacgtgc  125200      ------>ZmHOX2a(2)     <------ZmHOX2a(2)     <---------RVE1(1)    --------->ARR11(3) -TGA1a -O2<---------ARR11(3)                                                                  --------->ANAC46 >O2--------->AGP1                                                                      --------->ANAC58 >TGA1a<----------DOF2                                                         --------->YAB1 -ANAC58                                                                ----------->HVH21       ----- =================bZIP_DOF                       ----------->TBP      <---------ANAC55(2)      ------ -ANAC55(2)                           <-----------GT1            <---------CCA1(2) --------->ANAC46 -->OsbHLH66           <-----------GT1------->TEIL             <---------------AGL15    --------->ANAC58 >ANAC55(2)   --------->ZAT6      <---------TOE2(2)         <-----------GT1 ----------->GT1 --------- -ANAC58   <-----------GT1        <---------TOE1(2)<---------AHL20(2) --------->ANAC55(2) -----------   tcttgagatctttttaccactaaattaaccagttcgtatgtaactatgtctatatatatgtataaccatatcatgtaacagttataaaccacgacaatca  125300                                                                           <-----------TGA1                                                                           <-----------HVH21  <------                                                                          --------->ANAC46<---------LBD16     --------->ATHB12                      --------->ANAC46------>ZmHOX2a(1)     ---------->DOF2   -- ------->CBF                              --------->MYB46(3)              --------->DEAR3(1)--------- --->YAB1                           --------->YAB1   ------>ZmHOX2a(1)    --------->DREB2C(2) ------- >WOX13(1)                   --------->TOE2(3)--------->AtMYB61    <----------DOF2      <---------ARR14(2) ->CBF                       --------->TOE1(3)<---------ALFIN1   ------>ZmHOX2a(1)      --------->ARR14(2)   caatggatgatttcaatcttcgtagcgaaaaccctaattcatcatccaccacttcctcatcctcttcctctttccaccgtcacaagagcgaaaccggaaa  125400                                                          ----------->RAV1(1)                                                    --------->At4g35610                                                    <---------ZAT2                                                    <------NtERF2                                                    --------->ATERF1(1)                                                    <---------At4g35610                                                    --------->ZAT2                                                   ------>NtERF2                                                   <---------RAP2.3(1)                                                   <<<<<<<<<AtERF-5                                                   <<<<<<<<<AtERF-7                                                   <---------MYB46(3)                                                   <---------ERF1 --------->ZAT18                                                   <---------RRTF1(1)                                                   <---------ATERF1(1)                                                   <<<<<<<<<AtERF-2                                                   <<<<<<<<<AtERF-3                                                   <<<<<<<<<AtERF-1                                                   <<<<<<<<<AtERF-4                                                   <---------DEAR3(2)                                                  --------->ATERF1(2)                                                  <---------ANAC58<------NtERF2                                                  <---------ATERF1(2)                                                  <---------RAP2.3(2)                                                  <---------RAP2.6(2)                                                  <---------RAP2.3(3)                                                  <---------RRTF1(2)                                                  <---------ANAC46<---------ABI4(2)                                                  <---------RRTF1(3)                                                  <---------DEAR3(1) <------NtERF2                       --------->ANAC46           <---------ANAC58--------->ATERF1(1)                       --------->bZIP60(2)        <<<<<<<<<<AtTINY2  --------->ANAC58                       --------->ANAC58          <------NtERF2  --------->ANAC58              <---------WRKY38(1)  <---------ARR14(2)    ----------->HVH21              <---------WRKY12     ------->TEIL <---------ATERF1(1)  --------->ANAC58        <---------WRKY38(1)  --------->ETT(2)<---------ANAC58   --------->ANAC58        <---------WRKY12 --------->DOF5.7(2) --------->ALFIN1   --------->ANAC46      <-----------HVH21--------->ANAC58      <---------ANAC58 --------->MYB52(1)  --------->MYB52(1) <---------ALFIN1   ---------->CDC5--------->ANAC58 ---ARR14(2)  <---------WRKY45     --------->PCF2--------->RAP2.6(3)------>NtERF2                 --- ------->ANAC46<---------DOF5.7(2) --------->ARR14(2)  --------->ANAC58                        <----- >LBD16--------->WRKY18(1) <---------DOF5.7(2) <---------DEAR3(1)<---------ATERF1(1)       --------->ARR11(3) -->ARR14(2) --------->WRKY18(1) <---------SPL7--------->ALFIN1--------->RAP2.6(3)         <---------ARR11(3)   cacaaaacggtcaaggtcaacgtccacgttatcgacggaccctcagagcgtggcggctcgcgacagacggcaccgaattagcgaccgtttcaagatttta  125500                                                                                      ------>ZmHOX2a(2)                                                                                     <------ZmHOX2a(2)                                                                                     --------->CCA1(2)                                                               <-----------HVH21    --------->ARR11(3)                                                              --------->bZIP60(2)   <---------ARR11(3)                                                              --------->ANAC58      --------->ARR14(2)                                                  --------->ANAC58      <---------HSFB2a(2)                 <---------ANAC46            <---------WRKY18(1)     <---------ARR11(3)               <---------MYB46(3)           ----------->HVH21 --------->ANAC58      --------->AGP1              <---------DEAR3(1)          <---------ANAC58    --------->REM1(1)     <---------ARR14(2)              <---------AtMYB61           <---------ANAC58   <-------TEIL           <---------AGP1       --------->PCF5                   <---------YAB1    --------->At4g35610      <---------CCA1(2) ------->DOF2 --------->ALFIN1     ------->TEIL   --------->ANAC58   --------->ARR11(3)         ----- ------GT1<-----------RAV1(2)     <---------CCA1(2)    <---------MYB52(1)         ----------->ARR10   caaagcatggtccctggtggtgcgaagatggacactgtatctatgcttgacgaagccattagctacgtcaagttcttgaaggctcagatctggtatcacc  125600                                                                   --------->ARR14(2)                                                                   <---------ARR14(2)                                                            <------NtERF2                                                            --------->ATERF1(1)                                                           ------>NtERF2                                                          <---------DEAR3(1)                                                         <------NtERF2                           <---                                                        --------->LBD16                       -------                                 --------->REM1(1)      ------>NtERF2                       ---------                         --------->ANAC58              --------->ANAC46                     <--------                         --------->ANAC46              --------->LBD16                     <---------YAB1                         --------->ANAC58             <---------LBD16              <----------DOF2 ---->AtMYB61      --------->MYB46(3)          <-----------GT1     --------->GLK1(2)       --------->ICU4   aaaacatgcttctcttcataaacgaccacgaaactacatcatcttgtacttactctcccggcgctggagaatttggaccgaaactctttggttatgatga  125700                                                     --------->ARR14(2)                                                     <---------ARR14(2)                                                    ------>NtERF2                                                   <---------ZAT18          <---------MYB46(3)                                                   --------->LBD16          <------MYB83                                                   --------->ZAT18          <------MYB46(1)                                                  <---------ANAC58         <---------AtMYB61                                                  <---------ANAC46         --------->MYB59                                                  <---------ANAC58       <---------ANAC46                                              <-------GAMYB            <---------MYB46(3)                                           <---------At5g28300       --------->LBD16                                          ------------>AtMYB77   --------->ANAC58      <---------YAB1                                        <---------MYB52(2)       --------->ANAC46 <-------GAMYB                                     ================================================================  --------->KAN4(2)                  ----------------->AGL3   --------->ARR14(2) <------MYB46(1)    < ------YAB1                      <---------ANAC46<---------At4g35610<---------ANAC46<---------MYB46(3) ---->TGA1                       <---------ANAC58<---------LBD16 --------->ANAC58<------MYB83   ----- >YAB1                           <---------ANAC58--------->At4g35610--------->DEAR3(1) --------->ICU4 -ICU4      --------->YAB1<-----------GT1 --------->MYB52(1)  <---------ARR14(2)--------->MYB59 -----   cgattatgcccctataatggacacatattcacaaggcgtgccacttacggttgcggactcgaagtatacgccgtggtttggttcggttgatgatgagcaa  125800  Previous    Next  AGI:  At5g01310.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to HEC3 (HECATE 3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G09750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63891.1); similar to hypothetical protein OsI_010825 [Oryza sativa (indica cultivar-group)] (GB:EAY89592.1); similar to hypothetical protein OsJ_010048 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26565.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Histidine triad (HIT) protein ( Range:  from: 125303    to: 128959    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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