Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------GLK1(1)                                       --------->ARR11(3)                                  --------->YAB1                                 <---------YAB1   --------->MYB46(3)                    <----------DOF2    <---------ARR11(3)              ------>ZmHOX2a(1)--------->YAB1    --------->ANAC58         --------->DEAR3(1)    --------->TOE2(3) --------->ANAC58                                ----      --------->ANAC58        <---------YAB1 ------>ZmHOX2a(1)                                   <---      --------->ANAC46    <---------DAG2--------->GLK1(1)          ----------->GT1    <---------YAB1 >DOF2--------->ANAC58    <----------DOF2--------->ARR11(3)    <------ZmHOX2a(1)    --------->YAB1  -   cttcttgcacgccatccttcttctttagctttacgataatagatatcctgcaaccaattggtggaggaacagttaagaactcacgagtataattctgaga  95300       <----------DOF2      <---------DAG2    ------->TEIL   <---------ALFIN1                                <----------DOF2  --------->ZAT18                    --------->ANAC58                                         -------  <---------ZAT18            --------->TOE2(3)    <---------DAG2   <----------DOF2           <------- ----->CCA1(2)  --------->DAG2       --------->ANAC58           --------->GLK1(2)          --------->ARR14(2) ------GLK1(1) ---------->DOF2       --------->ANAC46       --------->HSFB2a(2)            <---------ARR14(2) -------------->AtSPL8     ------->TEIL    <-------TEIL     <---------HSFB2a(2)    ---------->DOF2 <-   aatgcgcaccttttacataaagctctaagaacctcattcaaggcatacatacccttttgtctcgagaagcttttcccatggcctctaaagtagaatacgg  95400    --------->ZAT14    <---------ZAT14    --------->ZAT18          <---------At4g35610 <---------MYB46(3)          <------NtERF2 <------MYB46(1)             --------->At4g35610 <------MYB83              <---------WRKY12 -->ANAC46               <-----------HVH21                --------->ANAC58 --LBD16              ---------->DOF2                     --------->ANAC58 -------P        --------->ZAT6           ----------->HVH21                 --------->At4g35610   agttggttcactgcgatgaacactaaaagtcagcgaaaactgaagggacagagataagttaagccactagtgtgtctcagaggcattctatcaaacacat  95500                                                                             <---------ANAC46                                                                           <---------At5g28300                                                                          <-----------GT1               <---------ARR11(3)                                   >>>>>>>>>E2Fd                <---               --------->ARR11(3)                                   >>>>>>>>>E2Fc                <---               --------->ARR14(2)                                  ------>NtERF2             --------               <---------ARR14(2)                                  --------->LBD16           <-------              --------->RVE1(1)                                   --------->ANAC58           --------              --------->CCA1(1)                                   --------->ANAC46        --------->At4g35610      ----------->RAV1(1)                                         --------->ANAC58        <---------At4g35610  <---------ZAT14                                                --------->MYB46(3)     --------->ANAC46  --------->ZAT18         ----------->GT1 <---------AHL20(2)   --------->ARR14(2)    <---------ZAT14  <---------ZAT18      ----------->GT1   --------->AHL20(2)    <---------ARR14(2)    --------->ZAT14  --------->ZAT14   <---------AtLEC2--------->HSFB2a(2)      ----------->ARR10  --------->ZAT14 -----   taagtgcacaacaaaaatatctgcaaggtagaaaatttcgagattaaatcgatatacaagaagaagacccgccaaattaccgtatagtatacagcagcta  95600 ---MYB46(1) ---MYB83 ->At4g35610                                                                                  <------ --ZAT2             ---------->DOF2                                                       <<<<<<<<<<GT-3b ->ZAT2           --------->ANAC58           --------->O2                      --------->ARR14(2) ---->MYB59       --------->ANAC58<---------TOE2(3)         <-----------HVH21 <---------GLK1(2)     *TSS   ggtatgtgaagaagagtagcaccaaagtagaaattcaaggtagagccaagtgaagaagactgtgtgagagaacaaaaaccgattcttcttatttttcttt  95700                                                                                                    -                                                                                                    -                                                                                                    <                                       <------------CBF               <---------ANAC55(2)           <                                      --------->ATHB12      <----------DOF2                 <--------     <---------ZAT18    ----------->TGA1                 --------->ARR11(3)             --------->AHL20(2)     --------->ZAT18  --------->At4g35610    <---------ANAC58         --------->ANAC55(2)<---------AHL20(2) ------>ZmHOX2a(2)    <---------At4g35610    <---------ANAC58     <-----------HVH21     --------->ICU4 ----DOF2  ------------>CBF        <---------ZAT6        <---------ARR11(3) --------->MYB59<---------YAB1   tgatctgtgccctaacaatttggaagatgacgaaatagagttattgggcttgagaccaagttcttttgggtcacatattaggcccaagtatttattaatg  95800                                                                                      -------->ATHB1               <---------ANAC55(2)                                                    <---------AHL20(2)               ----------->GT1                                                        <---------ICU4             <---------ATHB12                                                         --------->ATHB51     --------->HSFB2a(2)                                                              -------->HAHB4     <---------HSFB2a(2)                                                              --------->ATHB12  <-----------GT1                      --------->AHL20(2)                            <---------ATHB51 -------->HSFC1(2)             <---------ARR14(2)                                    --------->ICU4 -------->HSFB2a(1)            <---------ARR11(1)                               ----------->GT1 ---------HSFB2a(1)            --------->ARR14(2)        ----------->GT1        <---------ZAT6 ---------HSFC1(2)            <---------CCA1(2)          --------->AtLEC2     <---------ANAC46 -AHL20(2)  XXXXXXXXXXXXXXXXXXXX>MIR862-5P           ------>NtERF2      ------->TEIL <---------YAB1--   gaattttcgagaccaataagtaaaacatgtccgtatccaaataaaacaaacattcggccatgtaaattctgacgaacatttagtgtaattattgtatcga  95900                                                                    <-----------GT1                                                                 --------->ATHB51                                                                 --------->YAB1              <---------AHL20(2)                                 <--------ATHB1                   ===              <---------YAB1                                     <---------ICU4                <-----             --------->AHL20(1)                                  <------------ATHB5            <-----             <---------AHL20(1)                                  <--------HAHB4                ------          --------->AHL20(2)                                    <---------ATHB51               ------       <---------AHL20(2)                                       --------->AHL20(2)             ------      --------->AHL20(2)                                        --------->ICU4                <------     <---------YAB1           <----------DOF2                   <---------ATHB12              <------  <---------YAB1 <---------WOX13(1)      ---------->DOF2   --------->ZAT6               <---------ANAC58  <---------AHL20(2)        ---------->ID1--------->DAG2------>ZmHOX2a(1)         --------->ZAT18 --- ------->ICU4--------->AHL20(2)   <-----------GT1      <---------MYB59  --------->ANAC46<---------ANAC58   aatttttattaaaaatataattgattttttgtctttttacaaaaaaagcagtcgattcctaacacaataattacacatcccaagggcattgggttcgaat  96000      <------ZmHOX2a(1)    <---------TOE2(3)                                         --------->YAB1    <---------TOE1(3)             --------->ARR14(2)   <---------MYB52(1) ===============================================MADS_MADS  --------->YAB1 ----ARR14(2)                 ----------------->AGL3------->TEIL ----ARR11(1)             --------->ATHB12     ----------->RAV1(2) --->GLK1(2)            <---------WOX13(1)     <---------At4g35610 ->TEIL               --------->ATHB12         --------->At4g35610 --->ARR14(2)      <---------At4g35610     <-----------HVH21 <---------YAB1                     <---- ---ARR14(1)      --------->MYB52(1)    <---------ANAC58  <---------YAB1       --------->MYB46(3) ---CCA1(2)     <---------ATHB12  <---------ARR14(2)--------->SPL7           <-----------GT1  ------- ------------>AGL15--------->At4g35610  <---------ANAC58  --------->ICU4    ---------->DOF2   <------   cttgttaaggaaaatcaaatcaactgattgatttcatatatggattgtcacctgtacgttatgattataaacagtcattaaaccactctaatggcaaata  96100                                                                      <---------YAB1                                                                   <---------YAB1                                                                   --------->ICU4                            <----------DOF2                     <---------YAB1            --------->YAB1                         <---------ARR11(3)      --------->ANAC58--------->YAB1          <---------YAB1                         --------->ARR11(3)      --------->ANAC58-------->HAHB4        --------->YAB1 -----GLK1(2)         <---------GLK1(2)        --------->MYB52(1)<---------ICU4       <---------YAB1 -->ARR14(2)    <---------ARR14(2)        <-----------GT1       --------->ICU4      <---------ICU4 ---ARR14(2)    --------->ARR14(2)  <---------MYB52(1)      --------->AHL20(2)   --------->YAB1   ---   ttctccattgaaaaacaagaactggattatctttttctgttaatttacaaaacggaaaacaaaaaaatgattatgaaatacaataaccattataaaaact  96200  Previous    Next  AGI:  At5g01230.1    Description:  FtsJ-like methyltransferase family protein. similar to FtsJ-like methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT4G25730.1); similar to Ribosomal RNA methyltransferase RrmJ/FtsJ [Medicago truncatula] (GB:ABD28674.1); contains InterPro domain Ribosomal RNA methyltransferase J (InterPro:IPR015507); contains InterPro domain Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877) Range:  from: 92624    to: 95700    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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