Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             ------>ZmHOX2a(1)                                      <---------bZIP60(1)                                      --------->bZIP60(1)              <---------AHL20(2)                                     ----------->ARR10                 <---------YAB1                              <---------ANAC58               --------->ICU4                              <---------ANAC58          --------->ANAC46                         <---------At4g35610            --------->ANAC58  <---------WOX13(1)                 <---------MYB46(3)----------->HVH21    --------->ANAC58--------->ATHB12      <------ZmHOX2a(1)         <----------DOF2 --------->At4g35610    <----------DOF2 <---------TOE2(3)          <------ZmHOX2a(1)   tttgaattaggctttggatttgttgagagcttccttggtgacatcctctgctttgagcacgacattatggaatttgattgctaagaaactgaaggaggag  53600                        ---------->DOF2             --------->ANAC58                                          --------->ZAT6             --------->ANAC58                                     <---------KAN4(2)        ----------->HVH21                                    <---------ZAT6                 <--------  <----------DOF2   ---------->DOF2                  ---------->DOF2  ------->TEIL <---------MYB46(3)   actgatttatgggacacggtttcaaagaaagtgaaggaagagacttgaagaaatagaaagctagtgagaatgaactctaagtcgattgttgattatgttt  53700                                                                           --------->ATHB51                                                                           -------->ATHB1                 --------->REM1(1)                                         --------->ATHB12            --------->GLK1(2)                                              <---------ICU4            --------->ARR11(3)                                            <---------ATHB51            <---------ARR11(3)                          <----------DOF2   <---------AHL20(2)       --------->LBD16                              <----------DOF2       --------->AHL20(2)     <---------LBD16                       --------->ANAC58               --------->ICU4  --------->GLK1(1)                        --------->ANAC58           --------->YAB1        <-------TEIL  <---------GLK1(1)                        --------->ANAC46    --------->ZAT6    <----------DOF2----- -YAB1<---------ANAC55(2)   ------>ZmHOX2a(1)   <---------CCA1(2)    <---------ATHB12<---------TOE2(3)   ttagaattccgcaaaatctacattacattcctcatgttttcttccaagccttatctttctttgtaagactaatcaaattattgttttatggaaattcatc  53800                                                                   <---------ARR14(2)                                                           --------->ANAC58                                                           --------->ANAC58                                                         --------->MYB46(3)      --------->TOE2(1)                   --------->ANAC58                   <----------ID1             --------->TOE1(1)           --------->AHL20(2)                       --------->ANAC58            ------>ZmHOX2a(1)           <---------AHL20(2)                      --------->DAG2  --------->ARR11(3)    ----------->GT1--------->ANAC46               ---------->DOF2  --------->GLK1(2) ---->TOE2(3)      --------->ANAC58  <----------DOF2--------->ANAC58 <---------LBD16 <---------YAB1   ttaatagggttttttaaatgcaggcaaaaacttgcacatctttttgagtttataaagcaacaagcctaaaatctggaatttcctagtacgataagactga  53900                                                           <------MYB83                                                         <--------P                                                    --------->CCA1(2)                                                    <------ZmHOX2a(2)                                                   --------->AGP1                                                   --------->ARR14(2)                                                   --------->ARR11(3)                  --------->AHL20(2)               <---------ARR11(3) <------------CBF       <---------ICU4                        --------->YAB1<------MYB46(1)       --------->YAB1  <-------TEIL ---------->DOF2<---------ARR14(2)--------->ATHB12           -----      --------->MYB46(3) ------->TEIL       <---------YAB1 ----------->GT1    --------->ICU4    <----   aatatacaaccattaccaaaaaaaatgcatccatatacaaaagtttataataagatccagttggtatatagtaattgggaatgttgaagacatatgaagt  54000                                     --------->GLK1(1)                                   ----------->RAV1(1)         *TSS                        <---------GLK1(1)                               --------->WRKY12         --------->AHL20(2)    --------->MYB52(1)      <---------At4g35610           --------->WRKY38(1)    ----------->GT1           <---------AHL20(2)       --------->At4g35610          <---------MYB52(1) ---->ALFIN1              <---------AHL20(2)      --------->ANAC46                 <-------GAMYB -----ZAT6             ----------->GT1      <----------DOF2                     ------>ZmHOX2a(1)   gttgatcagaaaaaaataagacttgaagttaattaatggaaaccctctttctcagccagaagacttgaaggcttctattctcctccgttgcccacaaaaa  54100                           <---------ANAC58                           <---------ANAC46                           <---------ANAC58                         ------>NtERF2                                 --------->TOE2(3)                         --------->LBD16                            <---------GLK1(1)                        <---------DEAR3(1)                          --------->GLK1(1)                       <---------LBD16                          ------>ZmHOX2a(2)                       <------NtERF2                           --------->CCA1(2)                       --------->ATERF1(1)                     <------ZmHOX2a(2)                     <---------ARR14(2)                        --------->At4g35610                     --------->ARR14(2)                       <---------AGP1                    <---------At4g35610                       <---------ARR14(2)                   <---------RAP2.3(1)                        --------->AGP1               <---------ARR14(2)                             <---------ARR11(3)               --------->ARR14(2)                             --------->ARR14(2)              <---------MYB52(1)<---------YAB1                --------->ARR11(3)      <---------ANAC58<---------ATERF1(1)                    --------->GLK1(1)             ----------      <---------ANAC58------>NtERF2        <---------ARR14(2)<---------GLK1(1)        <-----------GT1   caaaatttgcttcgccgttttcggctccggcgtgattcttgagaagaactgaagtagagagagagatctgaaatctcaatctccgatttaacttggtaac  54200                                                              <----------DOF2                                                           ------->TEIL                                                        --------->ANAC55(2)                                                     <-------TEIL                                                    <---------MYB52(1)                             --------->ATHB12     <---------ANAC58                ------>ZmHOX2a(1)                 <---------ANAC46                                  -         <---------YAB1     <---------YAB1        <---------ANAC58                                  <   --------->GLK1(2)     <----------DOF2       <---------ARR14(2)      ----------->RAV1(1)  <-------- ->GT1<----------DOF2<----------DOF2           --------->ARR14(2) <---------At5g28300 <-------TEIL  <   tagagaagcttttgattcctattctttcttttgatttgtatttcttagggttccgttcatgtaacttttacagcgacaatgcttcaaattcgtcttcgga  54300                                                                                              <------                                                                                              ------>ZmHOX2a(1)            <---------ARR14(2)                                                           ------>ZmHOX2a(2)         --------->ANAC58                                                               <------ZmHOX2a(2)         --------->ANAC58                                           ------>NtERF2      <---------ARR14(2)       --------->MYB52(1)                                          <---------ETT(1)    --------->ARR11(3)      ----------->HVH21                                     <---------ANAC58           <-----------ARR10      --------->DEAR3(1)                           <---------ARR14(2)                  <---------ARR11(3)      --------->ANAC46                            --------->At5g28300                  --------->ARR14(2) --------->GLK1(1)                      ------>NtERF2       ----------->RAV1(2)   --------->ANAC46 <- <---------GLK1(1)                     ----------->HVH21--------->ZAT14          ===============HOX2a_HOX2a -------->ARR14(2)                     --------->DEAR3(1)   <---------ANAC58     ==============HOX2a_HOX2a ---------ARR14(2)             ------>NtERF2      <-------GAMYB<-----------HVH21 ------>ZmHOX2a(1) <- -LBD16------>NtERF2       <---------ANAC58   ------------>AtMYB77--------->DEAR3(2) --------->DEAR3(1) ---------GLK1(1)          <---------ANAC58   ------------>MYB.PH3(1)  --------->AtMYB61=============HOX2a_HOX2a   gggattccccgacggaaactggaaatggtgcgaggccttctccgacggagacggttactgtagcctgtcccgaccatctcgtcctcgccgatcttcctgt  54400                           <---------ALFIN1                       --------->ZAT2                           --------->DEAR3(1)                  <---------MYB52(1)                           --------->AtMYB61                  <---------SPL7                          --------->MYB46(3)                  <-----------TGA1                          <---------MYB55(2)                  <-----------HVH21                        <---------ALFIN1                     --------->RAP2.3(3)                 <---------MYB52(1)              <---------DEAR3(1)                 ----------->HVH21               <---------MYB46(3)                            <-----               <---------ANAC58                <-------GAMYB --------->DEAR3(1)               <------               <---------ANAC55(2)            <---------DEAR3(2)  --------->At4g35610         -------               --------->ANAC55(2)            <---------MYB46(3)  <---------At4g35610        <-------TEIL            --------->ARR14(2)               <---------DEAR3(1)<------NtERF2                <--------            <---------ARR14(2)              <---------MYB52(1)------>NtERF2               <---------ANAC58       --------->GLK1(2)--------->ANAC46   <-----------HVH21 <---------ATERF1(2)          <---------ANAC58 ---------->DOF2--------->LBD16       --------->ANAC58       --------->ATERF1(2) --------->ZAT14 -----RAV1(1)  <---------ANAC46       --------->ANAC58      --------->RAP2.3(1)  --------->ZAT18 --------ANAC58<---------ANAC58--------->At5g28300        --------->ANAC46       <---------ZAT18 --------ANAC58<---------ANAC55(1) <---------ATHB12<------NtERF2  <---------ZAT2 <---------ZAT14   tgcgaaaggaatcggttccgtgactcccaccaccgtaatcaagcccgtcggtcgtcgttctcgccgtcagctaggcgagagagttcacttctgcgttcgt  54500  Previous    Next  AGI:  At5g01150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64803.1); contains InterPro domain Protein of unknown function DUF674 (InterPro:IPR007750) Range:  from: 51987    to: 53816    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g01160.1    Description:  e-cadherin binding protein-related. similar to hypothetical protein [Vitis vinifera] (GB:CAN64199.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 54009    to: 55855    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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