Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <---------O2                                      --------->ANAC46                                <-------GAMYB                               <---------MYB46(3)                               <------MYB46(1)                                 --------->LBD16                           <-----------RAV1(1)                                 --------->ANAC46                        <---------ARR14(2)                                    <---------ATERF1(2)                        <---------AGP1--------->O2                            --------->ATERF1(2)                        --------->ARR14(2)    <---------YAB1                 <---------LBD16                --------->O2   --------->MYB55(2)      <---------ZAT6       <---------At5g28300  <------------MYB.PH3(1) ------>ZmHOX2a(2)--------->ICU4        <---------AHL20(2) -------->MYB52(1)     <---------CCA1(2) ----------->GT1    <---------YAB1 <-----------GT1 ----->YAB1     <---------O2   <------MYB83<---------MYB52(1)<---------------AGL15  ----------->GT1 --->AtLEC2  --------->ANAC46<---------MYB52(1)  <---------YAB1 --------->AHL20(2)---------->DOF2  --   cataacggtttcaccacgacgtcttggatctgttggttagacgtcgttattagtattgtgttactattaaatgttttttaccggcaaagttaaaaactaa  15800                                 ----------->GT1                             <---------ARR14(2)                             --------->ARR14(2)                       --------->WOX13(1)                                                <----------DOF2                      <-------TEIL                                                   --------->MYB46(3)                     <------ZmHOX2a(2)                                     <---------ANAC55(2)                    --------->ARR11(3)                 <------ZmHOX2a(1)   --------->ANAC58                    <---------ARR11(3)           <<<<<<<<<<GATA-1          --------->ANAC55(2)                    --------->AGP1     <---------AHL20(2)                  --------->ANAC55(1)                   --------->GLK1(1)  <---------AHL20(2)                   --------->ANAC46 ------->GLK1(2)   <---------GLK1(1)  --------->AHL20(2) ---------->DOF2   --------->ANAC58   <------   aaatcggggctcatagattagagatccatcaaatacggtattaatttctgaaatcgaggaaaagaaaacacaaacacacgcaattcaacaactttccgat  15900                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)                                                                  --------->AHL20(2)                                                               --------->AHL20(2)                                                               <---------AHL20(2)                <---                                                         --------->At5g28300                     ----                       <---------AHL20(2)               ----------->GT1----------->GT1           <---       <---------AHL20(2)               --------->AHL20(1)    <---------AHL20(2)                -----      --------->AHL20(2)                <---------AHL20(2)    --------->AHL20(2)                -----      <---------AHL20(2)                <---------AHL20(1)    <---------AHL20(1)              <------ <---------TOE2(3)    --------->AHL20(2)--------->AHL20(2) --------->YAB1                   <-------- ---------AGL15----------->GT1    ----------->GT1    ----------->RAV1(1)                   <---------TOE2(3)   tttaagaaataaatgactagtatataaaatggaaattggtaatataatatagttcccacagtaataaaattaatagttaatatttcgaaaattttggtta  16000        --------->DAG2                                           <----------CDC5       ---------->DOF2                                          <---------ZAT2    --------->AHL20(2)                                          --------->ZAT2    <---------AHL20(2)                                          <---------At4g35610   --------->AHL20(2)                                           --------->At4g35610  <---------YAB1                                                ----------->RAV1(2) ---MYB83                               --------->ALFIN1     --------->ZAT2 ------->GT1                          <---------ANAC58       --------->At4g35610 ---MYB46(1)                          <---------ANAC46       <---------At4g35610                   <- ---->MYB59                           <---------ANAC55(2)    <---------ZAT2                    <----- ---->MYB46(2)                ----------->GT1              --------->MYB46(3)                  <----- ---MYB52(1)      --------->DAG2      <---------ANAC58   ----------->RAV1(1)                 <------ZmHOX2a(1) -MYB46(3)       ---------->DOF2     <-------TEIL        ===================RAV             <--------   ggttattaaaaaagggagagaaagtggtataagagtaaatacgtggagaacatgttcgacaacagctgctgaggcaatggaagagaagagaagaaggacg  16100                                                                --------->TGA1a                      -------->HAHB4                            <---------O2                      --------->YAB1              <------ZmHOX2a(1)                                <-  --------->ANAC58    <---------ICU4              --------->YAB1--------->O2                       --  --------->ANAC58   --------->ICU4              ----------->GT1<---------TGA1a                  <--- -----ZmHOX2a(1)     <---------YAB1             <---------TOE2(3)   <---------YAB1             <----- ----TOE1(1)      --------->ICU4           <---------TOE2(3)  <---------ALFIN1          --------->SPL7 ----TOE2(1)     --------->ARR11(3)     <---------YAB1     --------->PCF2             <---------SPL7 --ID1 --------->ATHB12                --------->TOE2(3) <-----------GT1*TSS        --------------->AtSPL3   aggaacgcttgatttgagagataatgatgaagtcgaggcattgttaatgtaaggataatttgccccacttgtgattttgtgagagactcgtacgcgtatt  16200                                                                  --------->HSFB2a(2)                                                                  <---------HSFB2a(2)                                                                  --------------->AGL15                                                                 ----------------->AG                                                                 <-----------------AGL3                                                                 ----------------->AGL1                                                                 <-----------------AG                                                                 <-----------------AGL1                                                           <---------AHL20(2)                                                          --------->AHL20(2)                                                          <---------AHL20(2)                                                       --------->AHL20(2)                                                       <--------HAHB4                                                       --------->ATHB51                                                       <---------ICU4                                                       --------->YAB1                                                       -------->ATHB1                                                      <---------ATHB51                                                      <---------ATHB12                <---------YAB1                                                      --------->ICU4 --------->ARR14(2)                                                   <---------AHL20(2)<---------ARR14(2)             <                                                  ------------>CBF<---------------AGL15         ----- --------HSFB2a(2)                            <---------YAB1     ----------------->AGL2         ----- ------->HSFB2a(2)                         --------->AHL20(2)    ----------------->AGL3         ----- ------AHL20(2)        ----------->GT1     <---------AHL20(2)    <-----------------AGL2--------->ATHB12 ------TBP          --------->CCA1(2)      <---------YAB1<---------YAB1     --------->WOX13(1)  <----   tatagaacgaactaatagagagagatggcaaaactaaaatactatattattattcaattattaatttgccagaaatggcaatctagacacgattgaacac  16300          ------->GAMYB         --------->MYB46(3)        -------->P      --------->AtMYB61      --------->MYB46(3)   <---------WRKY18(1)  --------->WRKY38(1)                                                                ----------->GT1  --------->WRKY45                                                             <-----------HVH21  --------->WRKY12                                                            <---------TGA2(1) --------->DOF5.7(2)                                       --------->At5g28300--------->bZIP60(1) -------GAMYB                                      --------->AHL20(2)         --------->TGA2(1) ---->ANAC46                                      <---------YAB1        <---------TOE1(3)          <- ---->bZIP60(2)    --------->AHL20(2)<-----------RAV1(2)  ----------->GT1     <---------bZIP60(1)<--- ---->O2------>MYB46(1)      --------->HSFC1(2) --------->YAB1          <---------TOE2(3)  --------->ZAT6 -----O2------>MYB83         <---------HSFC1(2) <---------ICU4      <----------DOF2--------->ANAC55(2)   gtcgttgaccaaccaaaaaaaaaaaatagcaaacttccctcagggattagtcattatatactgtaattttctttagggttatgtcacatgttaaaactag  16400                 --------->AHL20(2)                --------->AHL20(1)         --------->TOE1(3)         --------->TOE2(3)   <-----------GT1   <---------AHL20(2)     <----------DOF2   --------->ZAT6<---------AHL20(2)        <---------ANAC58 --------->YAB1 --------->AHL20(2)         <---------ANAC58 --------YAB1   <---------AHL20(2)  <---------AHL20(2)         <---------GLK1(2)           <--------- ------ZAT6     <---------AHL20(1) --------->AHL20(2) <---------YAB1           ----------->GT1   tattaatactacctcaaatttatttagttttgttttataaaatttgcttttgtatttttaatgcagaattttcaacaaaatttgtaattctctctttcaa  16500                                                                               ----------->GT1                                                                          <---------YAB1                --------->YAB1                                          --------->YAB1  --------->AHL20(2)             <---------AHL20(2)            --------->AHL20(2) --------->AHL20(2)  <---------AHL20(2)---------->DOF2   <----------ID1           <---------AHL20(2) <---------AHL20(2) -DOF2         <---------YAB1 ----------->GT1     <---------YAB1       <---------YAB1         -------   cttataaattggaggttatcaaaaaagaaaactagttaattggacaaaacttatgaattgaacaattaaactcatcataagtgtttaaatagatgatata  16600                                                                              --------->AHL20(1)                                                                              <---------AHL20(1)                                                                              <---------AHL20(2)                                        ----------->GT1                      --------->YAB1                                       <---------TOE1(3)                     <---------AHL20(2)                                       --------->DAG2                        --------->AHL20(2)                                       <---------TOE2(3)                  <---------ICU4                            --------->ANAC58                              --------->YAB1              <----------DOF2          --------->MYB59                   <---------AHL20(2)   ----------->GT1          --------->ANAC58                             <---------YAB1  --------->DAG2          <---------ALFIN1                      <---------MYB52(1)----------->GT1 ---------->DOF2     <---------YAB1--------->YAB1          --------->GLK1(2)<---------YAB1 -->AHL20(2) <---------DAG2 --------->ANAC46          ---------->DOF2  --------->YAB1  --------->MYB46(3)   atataaagttaaacaccttttttatgaaacaccccaaaaataaggtaattcgttgcaaaagaagctgttagatttataattatattgtaacaactatgtt  16700  Previous    Next  AGI:  At5g01040.1    Description:  LAC8 (laccase 8); copper ion binding / oxidoreductase. Identical to Laccase-8 precursor (LAC8) [Arabidopsis Thaliana] (GB:Q9LFD2;GB:Q67YL1;GB:Q8GYV9); similar to laccase family protein / diphenol oxidase family protein [Arabidopsis thaliana] (TAIR:AT5G01050.1); similar to LAC7 (laccase 7), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G09220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15750.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); Range:  from: 13127    to: 16172    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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