Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------AHL20(2)                                                --------->AHL20(2)                                            <---------CCA1(1)                                            <---------RVE1(1)                                           <---------AHL20(1)                                   <----                                           <---------ARR11(3)                                   <----                      <---------DAG2       --------->ARR11(3)                              --------->YAB1                      <----------DOF2      --------->AHL20(1)                              <--------ATHB1                  ------>ZmHOX2a(2)  --------->YAB1            <----------DOF2            --------->ICU4                --------->ARR11(3)  <---------AHL20(2)      <-----------GT1               <---------ATHB12                <---------ARR11(3) <---------AHL20(2)     <----------DOF2  --------->HSFB2a(2) <-----        --------->AHL20(2)         --------->AHL20(2)  <-----------GT1     <---------HSFB2a(2) ------   ttgatatgttttaaatatgatctgcttttcaagtttttttaataagatattaaaaaataactttactttctaagtttttagaaaattagccaatgatttt  18582800                                                                --------->YAB1      --------->ANAC46        ------->GAMYB                     <---------ICU4  <---------HSFB2a(2)        <---------MYB55(2)                <---------ATHB12 -----YAB1                   --------->MYB46(3)          --------->ARR14(2)<----------DOF2 -----AHL20(2)          --------->YAB1      <----------DOF2    <---------ATHB51 ----AHL20(2) ------>ZmHOX2a(1)      <---------AHL20(2)  --------->GLK1(2) <---------DAG2 --------->DAG2 --->AHL20(2)--------->TOE2(3)--------->AtMYB61      --------->YAB1<-----------GT1       ---------->DOF2   aattctataagtcatcctaaaaacattcacaaccaccattttttttctttcacattcagaatccaataataacataacttttttgttttaaaaaagtttt  18582900                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                  <---------RVE1(1)                                 --------->ARR11(3)                                 <---------ARR11(3)                       --------->AHL20(2)                       <---------AHL20(2)                  --------->AHL20(1)                 <----------DOF2                  --------->AHL20(2)       <---------AHL20(2)                  <---------AHL20(2)       --------->AHL20(2)                  <---------AHL20(1)<----------DOF2 <---------ANAC58                              ---       <---------ARR11(3)        --------->AGP1<---------ICU4                     <-----------GT1 <--       --------->ARR11(3)       --------->GLK1(1)   <---------ANAC58            <---------AHL20(2)<--       --------->GLK1(2)        <---------GLK1(1) <-----------GT1        <-----------GT1       <-----   atagcccaaaatctacataataaaataaaatcagagatcttttttttaatttttgctttctctcgtcttctccatttactattttttctcttcagcgttt  18583000                                                                              <---------ZAT18                                                                              ------------>CBF               <---------AHL20(2)                                             --------->LBD16          --------->AHL20(1)                                 --------->MYB52(1)          --------->AHL20(2)    --------->ANAC46        --------->AHL20(2)  <---------LBD16         -          <---------AHL20(2)  --------->ANAC46          --------->YAB1   <---------ANAC58          --     --------->AHL20(2)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->ANAC58               -- ------>HSFB2a(2)            -------->P  <xxxxxxxxxxxxxxxxsmallRNA(i)    <---------ANAC58          -- -------LBD16  --------->AHL20(2)  <---------ALFIN1------------>CBF --------->ANAC58              <-- -------HSFB2a(2)  --------->AHL20(2)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ANAC46    ---- ----ARR14(2)  --------->AHL20(1)<---------ALFIN1 ------->GAMYB   --------->CCA1(2)            ------   ctcggaaaaaaataaaataaaataaaaactctaccccacatcccaaatacaacgacaataaaaaaacgatacgatacttgcgcaatcggagaatggaaca  18583100                                                                                             <------NtERF2                                                                                      ---------->DOF2                                          --------->DEAR3(1)                       <------NtERF2                                         <---------ABI4(2)                        ------>NtERF2------         --------->ANAC58              --------->ANAC46                           --------->RAP2.6(2)         --------->ANAC58              --------->ANAC58                          <---------DEAR3(1)--         --------->ANAC46              --------->ANAC58                          <---------ATERF1(2)    ---------->DOF2              --------->GLK1(2)                               --------->ATERF1(2) -------->MYB52(1)              <---------GLK1(2)                                <---------ANAC46 <-- --------->HVH21             --------->YAB1 <------NtERF2                     --------->ALFIN1------- --------->TGA1             <------ZmHOX2a(2)                            <------ZmHOX2a(2)   -------- ----->GAMYB               <---------ARR14(2)          <---------ZAT6    ============================ -------MYB52(2)           --------->ARR14(2)--------->DEAR3(1)     ------->MYC3 <---------RAP2.6(2) ----->At4g35610          <------ZmHOX2a(1)------>NtERF2  --------->CCA1(2) <---------O2    --------- --->MYB46(3)           <---------TOE1(2)--------->MYB46(3)         <-------MYC3--------->RAP2.6(3)<-   actgacgaaagacgacactgaaatcggaggatcagaatttgaagccaccgcatagtagtgatatgaaacatgtggatcaagtggcggcaaaaggagccga  18583200                                                                                                   <-                                                                                                   --         <---------ANAC46                                                                         ---       <---------ZAT14                       --------->ANAC46                                     ---  <---------ANAC58        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                   <---  <---------ANAC58    <---------At4g35610    <---------O2                                       ----- --->LBD16    <---------WOX13(1)           <---------ALFIN1                                   ------- ------->ARR14(2) <----------DOF2          --------->REM1(1)                                 -------- ----ZmHOX2a(1)   <---------DAG2      --------->ANAC58                      --------->ANAC58<-------- -->DEAR3(1) <------------CBF ------->TEIL<---------REM1(2)              xxxxxxxxxxxxxxxx>smallRNA(s) ->ATERF1(1)--------->ATHB12 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)     <------ZmHOX2a(2)    <---------SPL7 ====HOX2a_HOX2a <---------ANAC58     --------->ANAC46             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) >At4g35610<---------YAB1--------->At4g35610 --------->O2      --------->DAG2--------->DEAR3(1) <---- --------ARR14(2)<---------ANAC58     --------->ANAC58       ---------->DOF2--------->ANAC58---------   ggatgcgagttctgtgattgctttatctgatgaatctactacgctacacgtcgaaatcgattcaaaaggcgatcgagcaccgaatcgaacatcgtccgga  18583300                                                                                                 <---                                                                                                -----                                                                                               ------                                                                                           ----------     --------->ARR11(3)                                                               ------>ZmHOX2a(2)     <---------ARR14(2)                                                               ===============     --------->GLK1(2)                                                               --------->CCA1(2)     <---------ARR11(3)                                                              ================     --------->ARR14(2)                                                              <------ZmHOX2a(2)     <-----------ARR10                                                              <---------ARR11(3) --------HSFB2a(2)                            <---------LBD16                  --------->LBD16 <----- ------->HSFB2a(2)                           --------->MYB52(1)                ------>NtERF2 <------- --->ZmHOX2a(2)                             <---------ALFIN1                   xxxxxxxxxxxxxxxxxxxxxx -------->GT1                              --------->LBD16                  <---------At4g35610------ ---ZmHOX2a(2)                            --------->ANAC58                 <-----------RAV1(1)<------ ---->ARR14(2)                            --------->ANAC58               --------->At4g35610<-------- -->LBD16                                 --------->ANAC46               ----------->RAV1(2)<-------- ->HSFB2a(2)                             <---------LBD16           ------>ZmHOX2a(1)--------->ARR11(3) -LBD16   --------->ATHB12          ------->TEIL--------->LBD16    ==========================HOX2a_HOX2a -----ARR14(2)       --------->LBD16--------->ARR14(2)             =========================HOX2a_HOX2a -------->AGL1   <---------GLK1(1) <---------GLK1(2)              --------->TOE2(3) --------->AGP1   tcgagaaaatctccattggaatcccgaattggtttctgaatctcccgcaccggatgagaaggccttatcctcatcttctgccgcgagatctaatccgtac  18583400     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    ------->MYC2    <-------MYC2    ------->PIF5    <-------PIF5    <-------MYC3    ------->MYC3 --------HVH21 ---->ANAC46 --->SPL7 ----->AtSPL3 =================HOX2a_HOX2a =================HOX2a_HOX2a                                                                       < --TEIL                 <---------At4g35610                         <----------DOF2                <- --SPL7               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       --------->GLK1(2)                <-- >smallRNA(fl3)      <---------LBD16                             --------->ARR14(2)               --- ->TEIL              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       <---------ARR14(2)             <---- ---SPL1(1)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          --------->ARR11(3)            ------ -ANAC58          <---------HSFC1(2)                             <---------ARR11(3)            ------ -ANAC58   ------>ZmHOX2a(1)          <---------------AtSPL8     <---------ARR11(1)      <---------ANAC46   gtcgctcgtgctcctactgaaacttcggatgcctcgttgaaaggtactgtgtttaaaactgtgtcagtatctttttggtttatgctatgagatgtgtaag  18583500         --------->RVE1(1)        --------->ARR11(3)        <---------ARR11(3)     --------->AHL20(2)                                                              --------->At4g35610   <---------MYB52(1)                                                                --------->ZAT2 ----------->GT1                                   --------->ALFIN1                  <---------At4g35610 ------------MYB.PH3(1)                           xxxxxxxxxxxxxxxxxxxx>smallRNA(s2) --------->GLK1(2) --------At5g28300                              --------->DAG2                 <------MYB46(1) ---------GT1                                 ---------->DOF2                  <------MYB83 ------>MYB52(1)                       --------->GLK1(2)                     <--------P -----MYB52(2)           <------ZmHOX2a(2)  ----------->HVH21   --------->ALFIN1<---------HSFB2a(2) --->ANAC58         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------ANAC58     <-------GAMYB           < --->ANAC58  <----------DOF2          <---------GLK1(2)<---------ANAC58 <------ZmHOX2a(1)   <--------   taaccgttaaaatctctttgaaattggatcagaaacgatggaatctgtgaaaggtgtgcttgggagatggggaaggagggttggagaagctgcaatgaag  18583600                    <-------MYC3                    ------->PIF5                    ------->MYC4                    <-------MYC4                    <-------PIF5                    -------->ABF1                    ------->MYC3                    ------->MYC2                    <-------MYC2                   <---------ANAC55(2)                   <---------O2                   <---------TGA1a                   --------->ANAC55(2)                   --------->ANAC46                   --------->TGA1a                   --------->O2                  ------------>OsbHLH66                 <---------ALFIN1               ----------------->PIF3(1)            --------->LBD16            ------>NtERF2           <---------ANAC46                 ------>ZmHOX2a(2)           --------->ETT(1)               --------->ARR14(2)           <---------LBD16                <---------ARR14(2)        --------->LBD16           --------->LBD16                --------->ARR11(3)   <---------DOF5.7(2)            <------          <---------LBD16            <---------ARR14(2)      <---------MYB52(1)       --------->ZAT2      <---------ANAC58               --------->ARR14(2)      --------->DOF5.7(2)      --------->At4g35610      <---------ANAC58            --------->MYB52(2)        --------->TOE1(3)         <---------At4g35610 ------NtERF2<------NtERF2      <---------MYB52(1) <-----------RAV1(1)                <---------ZAT2 -ATHB12  <---------ANAC46 <---------ALFIN1<------ZmHOX2a(2)--------->TOE2(3)--------->AHL20(1)   gcagagagccttgccgggaacacgtggcaacaccgtgagtttccgatcttgtattgttgcatcgttaaccctgagaaaatatactatgagctgagattgt  18583700  Previous    Next  AGI:  At4g40100.1    Description:  ABA-responsive protein-related. Identical to Putative GEM-like protein 3 [Arabidopsis Thaliana] (GB:Q9M063); similar to GEM [Arabidopsis thaliana] (TAIR:AT2G22475.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22364.1); contains InterPro domain GRAM (InterPro:IPR004182) Range:  from: 18583230    to: 18584510    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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