Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    <                                                                                            ---------                                                           <---------AHL20(2)               ---------                   ------>ZmHOX2a(2)                      <---------YAB1                    ---------                 --------->ARR14(2)                     <---------ICU4                      ---------                 <---------ARR14(2)                    --------->AHL20(2)                 <---------ALFIN1           <---------YAB1  <---------TOE2(2)           <---------AHL20(2)          <---------ARR14(2)          <---------AHL20(2)      --------->ANAC55(2)  --------->ICU4              --------->ARR14(2)          --------->AHL20(2)  ----------------------->TaNAC69(2)                   <-----------ARR10<      <---------AHL20(2)--------->ANAC58               --------->AHL20(1)          --------->ARR11(3)     <---------AHL20(1) --------->ANAC58               <---------YAB1              <---------ARR11(3)     --------->AHL20(1)------>NtERF2       --------->ANAC55(2) --------->YAB1 <---------ARR11(3)    <    <---------AHL20(2)<---------ALFIN1   <-----------GT1-------->ATHB1    ---------->DOF2 --------->ANAC46   aactatatatattttaatagatcggcacccatgtttacatatttcacgtttcttaaaattattaatcgtagttgacaaaagatagtatcttcacacctca  18578900                                                           --------->ATHB51                                                           <---------AHL20(2)                                                           --------->AHL20(2)                                                           <---------ICU4                                                          --------->ICU4                                                          <---------YAB1 <---------ICU4                                         --------->YAB1 --------->YAB1                                        --------->ICU4 <<<<<<<<ARR2           <---------AHL20(2)             <---------YAB1 ---------YAB1          --------->AHL20(2)           --------->YAB1                           <------ >ANAC58          --------->SPL7                    <---------YAB1                        ---------->ID1 >ANAC58      --------------->AtSPL8            <---------YAB1  <-----------GT1      <----------DOF2 >bZIP60(2) <---------ALFIN1                   --------->AHL20(1)              --------->GLK1(2) >ANAC46--------->At5g28300  <-----------GT1   <---------AHL20(1)---------->ID1<-----------ARR10 <<<<<<<<ARR1 --------------->AtSPL3          --------->ICU4 <---------YAB1    <---------ARR11(3) ---------ATHB12<---------SPL7           ----------->GT1<---------ICU4         --------->ARR11(3)   caatcatagcagtaacaccgtaccattttattcactagtcttggagtaatatttttgataattatttttccttctatccaaaatctacttttgtcgtttt  18579000                                                                          <---------KAN4(1)                                                                          --------->KAN4(1)                                                                          <---------HSFB2a(1)                                                                          <---------HSFC1(2)                                                                          --------->HSFB2a(1)                                                                          --------->HSFC1(2)                           --------------->AtSPL8                        <---------KAN4(2)                           <---------------AtSPL8                       <---------GLK1(2)                --------->YAB1                                    --------->YAB1            --------->AHL20(2) --------->SPL7               --------->ANAC58        --------->AHL20(2)<---------ANAC46    ----------->GT1    <---------ATHB12        --------->ICU4  --------->MYB52(1)    <------MYB83  --------->ANAC58   ----------->GT1    --------->ARR11(3)      <------MYB46(1)    --------->ICU4   ------>ZmHOX2a(2)<---------TOE2(3)     ------->TEIL <----------ID1--------->YAB1   <---------TOE1(2) ----DOF2   <---------AHL20(2)--------->GLK1(1)      --------->YAB1 --------->At4g35610   agggatcgaaatatttaaaaataagataacgggtaccctctatgaatttggtgaataagaacaagaaatcatcagaatgttcgattcgaacgattacatt  18579100                                                            -------->HAHB4                                                            <---------ICU4                                                           --------->ICU4                   ---------                                                         --------->YAB1                     <--------                                                       --------->AHL20(2)                   ---------                                                  ------>MYB46(1)                   <-----------GT1    <---------AHL20(2)                           ----------->RAV1(1)             <---------GLK1(2) <-    <---------YAB1                 ---------->DOF2------>MYB83               --------->ANAC55(2)<----  --------->YAB1      ---------->DOF2          --------->MYB46(3)            <---------ANAC55(2)-----   ccatttataatttgtttgaatatggaaagtagtttgaaaaagaccaaaaaccaacaaaataataatgcaatcgacgattaagtgattctccatatatatt  18579200                    <---------ANAC58                    <---------ANAC58                <---------ANAC46                <---------ANAC58                <---------ANAC58                <-------GAMYB               <------MYB83                                                         <----------DOF2               --------->MYB55(2)                                             --------->ARR11(3)    ----------->HVH21                                                         <-----------GT1 >AHL20(1)     <---------MYB46(3)                                             <---------ARR11(3) -AHL20(1)     --------->MYB52(2)                  <------------CBF         <---------AHL20(2) >ARR11(3)     <------MYB46(1)                    --------->ATHB12       <---------AHL20(1) --------YAB1 <---------AtMYB61                 <----------DOF2          --------->AHL20(2)         - -----YAB1   <--------P     <---------AtLEC2   --------->TOE2(3)         <---------ARR11(3)        -- ---->ICU4 <-----------RAV1(1)      --------->AHL20(2)<---------WRKY18(1)--------->AHL20(1)  --------   gattatttgacccatgttggttgcatacttgcatagaataaaacagtttcctttattgaccaaaaaaaactactatatattatcttctttttagtccatc  18579300                                      <---------ANAC46                                    --------->ZAT14                              ----------->RAV1(2)                             ------->TEIL                             -------->P                                                 ------>ZmHOX2a(2)                         <---------ARR14(2)                                            <------ZmHOX2a(2)        *TSS             <---------ARR11(1)                                           <-----------ARR10     --------->ANAC58    --------->ARR11(3)       <---------------------WRI1          <---------AGP1     --------->ANAC58    <-----------ARR10  <------ZmHOX2a(2)                         --------->ARR14(2) --------->ANAC58        --------->ARR14(2)--------->ARR11(3)                         <---------ARR14(2) --------->ANAC58       <---------CCA1(2)  <---------ARR11(3)                         --------->AGP1 -------->DAG2     --------->ANAC58 <---------ZAT14                                   --------->ARR11(3) -------->DOF2     --------->ANAC58<---------ANAC46    <-------TEIL  --------->YAB1   <---------ARR11(3) ->WOX13(1)        --------->ANAC46<---------REM1(1)<---------DEAR3(2)               <---------CCA1(2)   aaaaagcaagaaaaacaaaacaagtcatatctacctggtgtagtagatcatcgtcgattcatcgatgggaagaataacaagttttgcagatctaataggt  18579400                           <---------ZAT2                           <---------At4g35610                     --------->ANAC58                     --------->ANAC58                 <---------HSFB2a(2)                                                     --------->ANAC46                 --------->HSFB2a(2)                                                    --------->LBD16             <---------GLK1(2)                                                         <---------ANAC58            --------->HSFC1(2)                      ---------->DOF2                    <---------ANAC58            <---------HSFC1(2)  <----------DOF2--------->ZAT6       <----------DOF2  ------>ZmHOX2a(1)         ---------->DOF2---------->DOF2 --------->YAB1--------->ANAC58           <-----------HVH21 <-   ---------->DOF2 ---------->DOF2     <---------YAB1 --------->ANAC58    <---------CCA1(2)        --   agaatcaaagacaaagcttctcaaagcaaagctgctttagtatcatcaaacactaaaagcaaaactctctctttccatctctctgtcctccgtgccacta  18579500                           <-----------HVH21                           <-----------TGA1                        <---------ARR14(2)                        --------->ARR14(2)                    <------NtERF2                   ------>NtERF2                   <---------LBD16                   --------->LBD16                  --------->DEAR3(1)                 --------->ATERF1(1)                 <------NtERF2                 <---------LBD16                <---------ATERF1(1)                ------>NtERF2  <---------O2                --------->ABI4(1)               --------->RAP2.3(3)               <---------ATERF1(2)               --------->RAP2.3(2)                                    <---------ALFIN1               <---------DEAR3(1)                     <---------MYB52(1) --------->DEAR3(1)               --------->DEAR3(1)                    <---------DEAR3(2)  <---------ALFIN1              --------->RRTF1(1)                    <---------ATERF1(2) <------NtERF2              --------->ERF1   --------->O2         --------->ATERF1(2)------>NtERF2              --------->ATERF1(1)                --------->ANAC46     --------->DEAR3(1)              --------->DEAR4(2)       <---------MYB52(1)            <---------MYB55(2)       -------              --------->RAP2.3(1)     --------->At5g28300            --------->MYB46(3)    --------->ARR14(2)              --------->ORA47(2)      <-------GAMYB<---------LBD16 --------->ANAC46        <---------ARR14(2)            --------->DEAR3(1) <---------At4g35610------>NtERF2    --------->ANAC58   <-----------HVH21            --------->ANAC46   --------->At4g35610--------->LBD16--------->TGA1a   --------->At4g35610 ----------->HVH21<---------ANAC46    --------------------->WRI1 <---------TGA1a   <---------ZAT2 --------ICU4------->GAMYB--------->YAB1         --------->DEAR3(1)--------->ANAC58<---------At4g35610 ------->YAB1<---------ATERF1(1)      =====================================MYC_MYB --------->ZAT2   ctcatgacccttcaacgccgccggggaatcgtcacctcgccgttattctctccgccggtactggctcacgagccaccgcttcttcagctgtcgaatccat  18579600                          <---------ANAC58                      <---------At4g35610                      <---------GLK1(1)                      --------->GLK1(1)                     --------->ARR14(2)                   --------->LBD16                 <---------LBD16                --------->MYB52(1)                         <-----------HVH21                    <----               <---------ALFIN1                           --------->ANAC46                     <-----               --------->DEAR3(1)                  <---------ICU4                              ------               --------->AtMYB61  <---------At4g35610     --------->WOX13(1)                   ------              --------->MYB46(3)  --------->At4g35610<---------YAB1             <---------DEAR3(2) --            --------->ANAC58  <---------ANAC58     --------->YAB1              <---------MYB46(3)  --            --------->ANAC46  <---------ANAC58     <--------HAHB4              --------->MYB52(2)  <-         <---------REM1(2)<---------ANAC58        <---------YAB1   --------->TOE2(3)     ------>ZmHOX2a(1) -->TOE2(3) --------->ANAC58  <---------ANAC46  --------->YAB1     <-----------HVH21     ============   aatggaacgtcttcacaccaccggagatgcttgcgtagctctcaagtctttgatcattatccatcacatcgtcaaacacggtcgtttcatcctccaagat  18579700                        --------->MYB55(2)                        <---------MYB46(3)                       --------->ALFIN1                       <---------AtMYB61          <-----------GT1  --------->ETT(1) --ZmHOX2a(2)         <---------MYB52(1) ----ARR11(3)        --------->LBD16                                                 <----------DOF2 --->ARR11(3)  <---------ZAT2                                                      --------->At4g35610 --->ARR14(2)  --------->ZAT2                                                 --------->ALFIN1 ------->At4g35610 <---------LBD16                              --------->GLK1(1)  <---------At4g35610 ------->ZAT2  <---------At4g35610                              <---------GLK1(1)<---------PCF2 --------At4g35610--------->MYB52(1)              <----------DOF2      <----------DOF2         <----- ==HOX2a_HOX2a --------->At4g35610 --------->At4g35610   --------->CCA1(2)  <-----------RAV1(1)<-----   cagctctctgtatttccagcttccggtggtcggaattatctgaaactttctgcttttagagatgagaaatctcctttgatgtgggagctttcttcttggg  18579800  Previous    Next  AGI:  At4g40085.1    Description:  other RNA Range:  from: 18579236    to: 18580371    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g40080.1    Description:  epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related. Identical to Putative clathrin assembly protein At4g40080 [Arabidopsis Thaliana] (GB:Q8L936;GB:Q9SMP9); similar to epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related [Arabidopsis thaliana] (TAIR:AT5G10410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22359.1); contains InterPro domain Epsin-like, N-terminal (InterPro:IPR013809); contains InterPro domain ENTH/VHS (InterPro:IPR008942); contains InterPro domain ANTH; (InterPro:IPR011417) Range:  from: 18579308    to: 18580711    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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