Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->At4g35610                                                                                   <---------At4g35610                                                                               <----------CDC5                                                                              ----------->RAV1(2)                                                                              <---------LBD16                                                                         <----------DOF2                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                       --------->ANAC58                               <---------ARR14(3)                 ------->GAMYB                                        --------->ARR14(3)                --------->ANAC46                                      --------->ARR14(2)                --------->ANAC58                                      --------->ARR11(3)                --------->ANAC58                       ---------->DOF2<---------ARR14(2)              --------->MYB52(1)                     =========================HOX2a_HOX2a            <---------ATHB12                         ==========================HOX2a_HOX2a           --------->ANAC58                          ------>ZmHOX2a(1)<-----------ARR10           --------->ANAC58                    --------->ARR14(2)     <---------ARR11(3)          --------->WOX13(1)                   <---------ARR14(2)     --------->AGP1       ----------         --------->MYB46(3)    ----------->RAV1(2)  --------->TOE2(3) <---------AGP1   --------->REM1(1)     <------ZmHOX2a(2) --------->ANAC58     ----------->GT1         ----------->ARR10 <-------TEIL   gtttccgatcaacaatcaacgaaacaagcagaaacctggcatagaagcgtaactccttaaatcgagcaccaagatctttcccctgagcttcatcaaagta  18563400                                                                                                   --                                                                                                   --                                                                                                -----                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                           ------>MYB46(1)                                                                                           ------>MYB83                                                                                         --------->AtMYB61                                                                                     ----------->HVH21                                                                                   <---------At4g35610                                                                                   --------->At4g35610                                                                            <---------TOE2(3)<-------  <----------DOF2           ---------->DOF2     ------>MYB83  ------>ZmHOX2a(1) ---------->DOF2------ >DOF2         <----------DOF2                  ------>MYB46(1)            ---------->DOF2--------->WOX13(1)   gctccttttcaaaatcgcttcatagaaaacaaaagcctcaagaagaaacctagcttcactagtcctcatgtattgactaaagtaaagctgaccaatccgg  18563500             --------->GLK1(1)     ------>ZmHOX2a(2)    <------ZmHOX2a(2)   --------->ARR11(3)                           <---------WRKY18(1)   <---------ARR11(3)                          --------->WRKY45 ------->ANAC58                                ----------->HVH21 ------->ANAC58             <-----------GT1    --------->WRKY12<---------YAB1                      <- ---->ZAT2   <---------GLK1(1)               <----------DOF2  <---------ANAC46 <-------TEIL       <-- --LBD16    <---------ARR14(2)             --------->ZAT2    <---------At4g35610         <----------DOF2 --->LBD16  --------->ARR14(2)  --------->LBD16--------->WRKY38(1)             <---------------------   ctcgcgatctcgccgatttcccatcggtttaaaccggactcgaccagctttgacctatgagattgctgatagttccatagtttcatataagctttgaaca  18563600                                           <---------HSFB2a(2)                                           --------->HSFB2a(2)                                          ------>ZmHOX2a(2)          <---------ANAC58                                         <------ZmHOX2a(2)           <---------ANAC58                                        <---------ARR14(2)        <---------DEAR3(1)                                        --------->ARR11(3)      <---------MYB52(1)                                        --------->ARR14(2)   <---------LBD16                    <---------ZAT18     <---------ARR11(3) <---------ARR14(2)                  <-----           --------->ICU4      --------->ANAC46            --------->ARR14(2)        <---------LBD16  --------->HSFB2a(2)          ------->GAMYB              <---------GLK1(1)        <---------ZAT2  <---------HSFB2a(2)         --------->MYB46(3)          --------->GLK1(1)        --------->ZAT2 ---------DOF2      <---------ZAT14 <------NtERF2        --------->ARR14(2)     ---------->DOF2<----- -------DAG2        --------->ZAT14--------->LBD16       ---------->TaMYB80    --------->AtMYB61 --TaNAC69(2)     --------->ZAT14<---------LBD16         <---------ARR14(2)   --------->ANAC46 <-----   ccttttggaagtaatgactctgtgctcttccaaacgccggaagatcgcgaactcttgcgaatttccggtctgcgttctccaccaaagctcggaaattgct  18563700                                                           <-----------HVH21                                                          --------->RAP2.3(3)                                                          --------->RAP2.3(2)                                                          --------->RRTF1(3)                                                          --------->DEAR3(1)                                                         --------->RAP2.3(1)                                                         --------->ERF1                 --------->ICU4                        --------->DEAR3(1)             ------>NtERF2                             ------->GAMYB            --------->ANAC58                          --------->DEAR3(2)            --------->RAP2.6(2)                       --------->MYB46(3)            ------->GAMYB --------->ZAT2      --------->LBD16            --------->ANAC46                  ----------->GT1       --------->YAB1   <---------ARR11(3)     --------->At4g35610<---------ANAC46      <---------YAB1   --------->ARR11(3)<-----------GT1        <---------LBD16------>NtERF2                  ---------->DOF2 ----ANAC46 --------->ANAC58              <---------ARR14(2)<------NtERF2 <---------ARR14(2) ----ANAC58<---------MYB55(2)             --------->ARR14(2)<---------MYB52(1)      ---------->DOF2 ----ANAC58--------->MYB46(3)         <---------MYB52(1) --------->RRTF1(1) <---------LBD16   tgaaacatcttcacccgccatgtttaccagcttaatttccctcagttccggtgaaaaccgccgtcgtttatcatcggctctggagacaaaggaaaagaga  18563800                                                                <---------AHL20(2)                                                           <---------AHL20(2)                                                           <---------YAB1                                                        <---------ARR11(3)                          -                                *TSS                    --------->ARR11(3)  <---------YAB1          <                         <---------DEAR3(1)            --------->YAB1    <---------AHL20(2)        <-                       --------->MYB52(1)             <---------YAB1     --------->AHL20(2)    <-----                      ----------->HVH21            --------->ICU4  <----------DOF2         <---------MYB52(1)                     --------->DEAR3(2)       ----------->GT1   <-----------GT1  <-----------GT1   <-           <---------ATHB12 --------->ALFIN1 ----------->GT1--------->AHL20(2)<---------AHL20(2) ----   gagagagaaactaatcaatgggaaacgacggtggagagagagagagagagataaatatgatattatttactttgttttattattttccactctgtttttt  18563900       <-----------GT1   <---------AHL20(2)   --------->AHL20(2)   <---------ICU4   --------->ATHB51  --------->ICU4                                                               <---------AHL20(2)  <---------YAB1                           <---------HSFB2a(2)                 <---------YAB1 -------->YAB1                             --------->HSFB2a(2)                 --------->AHL20(1) ---------ICU4                         <----------DOF2                        --------->YAB1 --------AHL20(2)                     <---------DAG2              <---------ANAC58            ------- ------TBP                      --------->YAB1                    <---------ANAC58        ----------- --------YAB1                   <---------ICU4     --------->At4g35610     --------->YAB1 <---------- ----->YAB1------>ZmHOX2a(1)   <---------YAB1---------->DOF2  ---------->DOF2 --------->AHL20(2)    -   tataattattttcctcgttgagttgttttgttgatgatcacctttctaaaagcagttgaagaaaaaaagcttgggattaataatattgttaactcgtacc  18564000                                                                               ------>ZmHOX2a(2)  --------->ICU4                                       --------->YAB1        <---------ARR11(3) >TEIL                                                <---------YAB1         --------->ARR11(3) ---->AtSPL8                                          <---------AHL20(2)   <---------ATHB12       <-- -----AtSPL3                   <---------YAB1   <---------ANAC46  --------->ZAT6     <---------AHL20(2) -------->YAB1    <----------ID1          <---------AHL20(2)      <---------ICU4     <-----------GT1   tataattttgagagaaaaaaacaacaagagattataaattctatgaaattgtgtatattataagatgatcactacaaatgatcttatttacattgcaaat  18564100                     <---------AHL20(1)                     --------->AHL20(1)          <---------ICU4                           <---------ANAC46         --------->ICU4                           <---------TOE2(3)          <---------ICU4        --      --------->AHL20(2)                    <---------YAB1 ----------->RAV1(1)             <---------At4g35610      <---------AHL20(2)                  <---------AHL20(2)            --------->ANAC46   --------->At4g35610 -------ANAC46       --------->ARR11(3)   --------->AHL20(2)          --------->ZAT6<---------AHL20(2)   gtgtgtaagtaattagtagcatatatattgtttgttttttatatttaaaattgacgtttagcaacaatgtaaacactaaacattgtttatttaagctgga  18564200                   <---------YAB1                   <---------MYB52(1)                  --------->TOE2(3)               ------->TEIL          --------->GLK1(1)                 --------->ANAC58          --------->CCA1(2)                 --------->ANAC58         --------->ARR11(3)          <-------MYC3         --------->ARR11(1)          ------->MYC3         <---------ARR11(3)         =============================bZIP_DOF         --------->ARR14(2)         --------->TGA1a         <---------ARR14(2)        ------->TEIL                           --------->AHL20(2)   --------->CCA1(2)            --------->ANAC58      ---------->DOF2  --------->YAB1  --------->AHL20(1)         <---------ARR14(2)   ----------->RAV1(1) <---------ATHB12  <---------AHL20(1)         --------->ARR14(2)------->TEIL           <<<<<<<<<ARR2                 < ------->AHL20(2)----------->GT1--------->ANAC58--------->DEAR3(2)    <<<<<<<<<ARR1              <---   ttaatatataagatatgcatcgttattagcaaaaacgcatgtgagcacgaacccacaaaagaattttgcacaatcataaaatactagtacatctcgtttg  18564300  Previous    Next  AGI:  At4g40050.1    Description:  signal transducer. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03570.1); similar to hypothetical protein OsJ_028549 [Oryza sativa (japonica cultivar-group)] (GB:EAZ45066.1); similar to Os09g0470900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063437.1); similar to hypothetical protein OsI_030678 [Oryza sativa (indica cultivar-group)] (GB:EAZ09446.1); contains InterPro domain Regulator of G protein signalling; (InterPro:IPR000342); contains InterPro domain Uncharacterised conserved protein UCP013022 (InterPro:IPR016607) Range:  from: 18560854    to: 18563832    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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