Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->LBD16        --------->ICU4                                                   --------->ANAC55(2)      --------------->AGL15                                       --------->YAB1      <---------------AGL15                        --------->ANAC58     <---------LBD16     ----------------->AGL3                --------->CCA1(2)     --------->ICU4     ----------------->AGL2               --------->ARR14(2)     <---------YAB1     ----------------->AGL1               <---------ARR14(2)   --------->YAB1     <-----------------AGL2             ----------->ARR10     <---------YAB1 ---------MYB46(3)                     <------ZmHOX2a(1)      --------->ICU4 --NtERF2                        <---------TOE2(3) --------->ANAC58 <---------YAB1                <--   agtcgttgccattttgagcatttgttctcaagattaatgaaggagatttgcacaagcgaatgtgatgatgatgatgcggaatgttgtatgaaaaacgagg  18560300                                                                                     <---------ANAC46                                                                          <----------DOF2                                                                         ------>ZmHOX2a(2)                                                                        <---------RVE1(1)                                                                        <------ZmHOX2a(2)                                                                       <---------ARR14(3)                                                                       --------->ARR14(2)                                                                       --------->ARR11(3)                            ---------->DOF2                        ---------->DOF2   <---------ANAC58                       <---------ARR11(3)            <---------TOE2(3) <---------ARR14(2)                       --------->ARR11(3)            --------->MYB59   --------->ARR14(3)  <---------TOE2(3)  --------->DAG2       <---------MYB46(3)     <---------ATHB12    <---------ANAC58 --------DOF2      ---------->DOF2  --------->YAB1   <---------TOE1(3) <---------ARR11(3)    --------   ctttaatgttgttacaggcacaaaaggtctcaaagttagcatagtggatggaatttaggtttttcaaatcaaagatctttatgggtttcttggagtagtc  18560400                                       <----------TaMYB80                                       --------->KAN4(1)                                       <---------KAN4(1)                                            -                                      ------->TEIL      <------ZmHOX2a(2)                      ------                                 --------->CCA1(2)     --------->ARR11(3)                    <-------                                --------->AHL20(1)     <---------ARR11(3)            --------->GLK1(1)                                <---------ARR11(3)     <---------AGP1         --------->ATHB51 ------                       <---------GLK1(1)               --------->ARR14(2)     -------->HAHB4 ------->GAMYB                      --------->ARR11(1)               --------->AGP1         --------->YAB1 --------                      --------->ARR11(3)               <---------ARR14(2)     <---------ICU4---------                      --------->ARR14(2)      --------->LBD16       --------->HSFB2a(2)    -------->P    --------->At4g35610--------->CCA1(2)     --------->LBD16    <---------GLK1(2)--------->ANAC46----    <---------At4g35610--------->GLK1(1)    <---------LBD16 ---------->DOF2  --------->ICU4------>MYB46(1) --->GT1              <---------ARR14(2)--------->KAN4(2)------>ZmHOX2a(2) --------->YAB1  ------>MYB83   aaatccatctgcaattgaaaaacagatatgccaatatatgaatattccctgaaaacagatctaaaagcttctcaaactaataatcgcaactccaaccaaa  18560500      <-----------GT1 ---------->GT1 >MYB83                                                                                             < --MYB59                    --------->ARR11(3)                                                  ----- >MYB46(1)                  <---------ARR11(3)                                          ---------->DOF2 ->AtMYB61   --------->ANAC58         <-----------ARR10                             --------->ZAT6  < >MYB46(3)   --------->ANAC46        <---------CCA1(2)      <---------ARR11(3)  <----------DOF2 ----- ----->YAB1  --------->ANAC58  <---------AHL20(2)          <---------GLK1(1) ------>ZmHOX2a(1) <-----   catagttaataccagacgaaactatccaaagatttattcaaatctctgcaaactcacctcgaaatctccatgtttcttcctcctttccactaaagcgatg  18560600                                      --------->LBD16                                     <---------ANAC46        <---------ARR14(2)          <---------LBD16 <-----------HVH21                <---------ARR14(2)                                             <--- ------MYB83                      --------->ARR14(2)                                             <--- ---->YAB1                      <---------MYB46(3)                                               <--- ------MYB46(1)            ---------->DOF2                                                      ----- ---->ATHB12              <---------ATHB12                         ------------>CBF   <----------DOF2 ----YAB1           --------->At4g35610            *TSS        <---------YAB1     <---------ALFIN1   ataggtcgcagaactagaagacagcgaaatcaagcggttccggttagaaattggactcgatggctacgattcaatctcacagagacacctttgttcttgg  18560700         <---------YAB1      <---------AHL20(2)      --------->AHL20(2)   ------------>CBF     --------->ATHB12     <---------DAG2     <---------WOX13(1) <------ZmHOX2a(1)       <---------ICU4       --------->TOE2(3)  <---------YAB1  ------>NtERF2                <---------YAB1      -------->P ------ANAC58    <---------RAP2.6(2)         --------->YAB1       <-----------GT1 ------ANAC46   --------->RAP2.6(3)       <----------DOF2  --------->DAG2               --------->At4g35610 ------ANAC58 ----------->HVH21          <---------DAG2   ---------->DOF2 <-----------GT1 ----->ID1<---------AHL20(2)           ------>NtERF2----------->GT1------->TEIL         <---------At4g35610   cgttttgatttattatttgacggctaggattcaatctctggcacctttcatcatttgtaaaaaagtatcaacctttttacttcgttcttgagctcaaatg  18560800                                                           <---------AHL20(2)                                                           --------->AHL20(2)                                                         <----------DOF2                                                         --------->TOE2(3)                                              --------->DAG2                                        -                --------->YAB1  ----------->GT1        <---------ATHB12                            --      ---------->DOF2 ---------->DOF2        ---------->DOF2 <XXXXXXXXXXXXXXXXXXXXMIR169D-G    <-----   ttgaaacttaaaacccattcatcacaaagttgaatagataatttgggtaaagtttcaatctttaattcgttcttggctcaaacttacatagatgtttatg  18560900                                                           <-----------GT1                ------>ZmHOX2a(1)                                                   <---------ARR14(2)               --------->MYB46(3)                                                   --------->ARR11(3)         --------->ANAC58                                                   --------->ARR14(2)         --------->ANAC58                                             --------->ZAT14                ---------->DOF2                      <----------DOF2        <---------ZAT14               --------->ANAC46---------- -------->DAG2     <---------ALFIN1         --------->AtLEC2         --------->TOE1(1)   --------->TOE2(3) -------->DOF2   <-----------GT1  --------->TOE2(3)<---------ARR11(3)--------->TOE2(1) ------>MYB83 ----YAB1      <-----------HVH21  <----------DOF2----------->ARR10  ------>ZmHOX2a(1)  ------>MYB46(1)   aaaaagcgatagaacaatgtcacactttcttagtttctttaatgcaatgcacagatattgttaacctctcctcgtacacaaagcaaaccatcctaaagaa  18561000               --------------------->WRI1            <-----------GT1         <---------ICU4        <---------YAB1        --------->ICU4      --------->YAB1      -------->HAHB4                                                       <-----------GT1      <---------ICU4                                                    <---------ICU4     <---------YAB1                                                    --------->ICU4               -     <---------ATHB12                                               --------->AHL20(2)             --     --------->ICU4                   <----------ID1          <---------ATHB12                  <----    <---------TOE2(3)               <---------ICU4     --------->YAB1--------->YAB1    <----------DOF2 >DOF2--------->ATHB12     <----------DOF2      ---------->DOF2--------->YAB1<---------YAB1 <--------   gagactaatgattattaccttgttctaatcttttacaaatatgacaaaactaaagaatcatcaaatcaaaataaaaattacaattctctcttttctttat  18561100                                                                ------>MYB83                                                                -------->P                                                                ------>MYB46(1)                                                              <---------MYB111(1)                                                            ------>MYB83                                                            -------->P                                                            ------>MYB46(1)                                                          --------->DEAR3(1)                                                          --------->AtMYB61                                                          <---------ALFIN1                                                          <---------MYB46(2)                                                          <---------MYB111(2)                                                          <---------MYB111(1)                                                          <---------MYB55(2)                                                          --------->MYB46(3)                                                         <---------MYB52(2)                                                       --------->ANAC46                                                      --------->MYB46(3)                                                      --------->DEAR3(1)                                                      <---------MYB55(2)                                            -------->P<---------MYB111(2)                                            ------>MYB83------>MYB46(1)  ----------->RAV1(1)                                            ------>MYB46(1)--------->MYB55(1)                                          <---------MYB111(1) <---------MYB59 -------->ANAC46                  --------->MYB46(3) --------->ANAC58    ------->GAMYB          <---- ------->TOE2(3)      --------->YAB1--------->ANAC46 --------->ANAC58    --------->AtMYB61     <----- -------GT1        <---------HSFB2a(2)    <---------MYB59--------->MYB46(3)             <-----------GT1 --DOF2            --------->HSFB2a(2)--------->MYB46(3)------>MYB83    --------->MYB46(3)     ------   accctaaacaaatacaaacttctataacaaaaacgaacaaacaacctactctctcacccaccaacctactctcaaccacagggatggatttttctaattt  18561200  Previous    Next  AGI:  At4g40045.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO46561.1) Range:  from: 18559778    to: 18560651    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g40050.1    Description:  signal transducer. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03570.1); similar to hypothetical protein OsJ_028549 [Oryza sativa (japonica cultivar-group)] (GB:EAZ45066.1); similar to Os09g0470900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063437.1); similar to hypothetical protein OsI_030678 [Oryza sativa (indica cultivar-group)] (GB:EAZ09446.1); contains InterPro domain Regulator of G protein signalling; (InterPro:IPR000342); contains InterPro domain Uncharacterised conserved protein UCP013022 (InterPro:IPR016607) Range:  from: 18560854    to: 18563832    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version